RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 FAM189BP81408 668 aa20.65■□□□□ 0.9
PTCD3-204ENST00000418628 MCM6Q14566 821 aa20.65■□□□□ 0.9
PTCD3-204ENST00000418628 PPP4R3CPQ6ZMV5 832 aa20.65■□□□□ 0.9
PTCD3-204ENST00000418628 KCNN1Q92952 543 aa20.65■□□□□ 0.9
PTCD3-204ENST00000418628 ADAM2Q99965 735 aa20.65■□□□□ 0.9
PTCD3-204ENST00000418628 TTYH1Q9H313 450 aaPredicted RBP20.65■□□□□ 0.9
PTCD3-204ENST00000418628 C17orf75Q9HAS0 396 aa20.65■□□□□ 0.9
PTCD3-204ENST00000418628 CHST12Q9NRB3 414 aa20.65■□□□□ 0.9
PTCD3-204ENST00000418628 ARHGEF15O94989 841 aa20.64■□□□□ 0.89
PTCD3-204ENST00000418628 MYOGP15173 224 aa20.64■□□□□ 0.89
PTCD3-204ENST00000418628 HOXA11P31270 313 aaPredicted RBP20.64■□□□□ 0.89
PTCD3-204ENST00000418628 PPP2R5AQ15172 486 aa20.64■□□□□ 0.89
PTCD3-204ENST00000418628 FAM187BQ17R55 369 aa20.64■□□□□ 0.89
PTCD3-204ENST00000418628 RESP18Q5W5W9 173 aa20.64■□□□□ 0.89
PTCD3-204ENST00000418628 SLC24A5Q71RS6 500 aa20.64■□□□□ 0.89
PTCD3-204ENST00000418628 NPAS4Q8IUM7 802 aa20.64■□□□□ 0.89
PTCD3-204ENST00000418628 TIFAQ96CG3 184 aa20.64■□□□□ 0.89
PTCD3-204ENST00000418628 ZNF689Q96CS4 500 aaPredicted RBP20.64■□□□□ 0.89
PTCD3-204ENST00000418628 DRC1Q96MC2 740 aa20.64■□□□□ 0.89
PTCD3-204ENST00000418628 ODF2LQ9ULJ1 636 aa20.64■□□□□ 0.89
PTCD3-204ENST00000418628 TSPAN1O60635 241 aa20.63■□□□□ 0.89
PTCD3-204ENST00000418628 ATF7P17544 494 aaPredicted RBP20.63■□□□□ 0.89
PTCD3-204ENST00000418628 ZNF131P52739 623 aa20.63■□□□□ 0.89
PTCD3-204ENST00000418628 CCDC73Q6ZRK6 1079 aa20.63■□□□□ 0.89
PTCD3-204ENST00000418628 CATSPER4Q7RTX7 472 aa20.63■□□□□ 0.89
PTCD3-204ENST00000418628 ZNF598Q86UK7 904 aaKnown RBP20.63■□□□□ 0.89
PTCD3-204ENST00000418628 GPBP1Q86WP2 473 aa20.63■□□□□ 0.89
PTCD3-204ENST00000418628 SPATA32Q96LK8 384 aa20.63■□□□□ 0.89
PTCD3-204ENST00000418628 RAD9AQ99638 391 aa20.63■□□□□ 0.89
PTCD3-204ENST00000418628 REEP2Q9BRK0 252 aa20.63■□□□□ 0.89
PTCD3-204ENST00000418628 SCAND2PQ9GZW5 306 aaPredicted RBP20.63■□□□□ 0.89
PTCD3-204ENST00000418628 FZD8Q9H461 694 aa20.63■□□□□ 0.89
PTCD3-204ENST00000418628 ELAC1Q9H777 363 aaKnown RBP20.63■□□□□ 0.89
PTCD3-204ENST00000418628 POLD4Q9HCU8 107 aa20.63■□□□□ 0.89
PTCD3-204ENST00000418628 ARHGAP28Q9P2N2 729 aa20.63■□□□□ 0.89
PTCD3-204ENST00000418628 DENND3A2RUS2 1198 aa20.62■□□□□ 0.89
PTCD3-204ENST00000418628 LCHNA4D1U4 455 aa20.62■□□□□ 0.89
PTCD3-204ENST00000418628 LRRIQ4A6NIV6 560 aa20.62■□□□□ 0.89
PTCD3-204ENST00000418628 TLL1O43897 1013 aa20.62■□□□□ 0.89
PTCD3-204ENST00000418628 EDN1P05305 212 aa20.62■□□□□ 0.89
PTCD3-204ENST00000418628 SSBP05455 408 aaKnown RBP eCLIP20.62■□□□□ 0.89
PTCD3-204ENST00000418628 ME1P48163 572 aa20.62■□□□□ 0.89
PTCD3-204ENST00000418628 RRAGBQ5VZM2 374 aa20.62■□□□□ 0.89
PTCD3-204ENST00000418628 RASSF8Q8NHQ8 419 aa20.62■□□□□ 0.89
PTCD3-204ENST00000418628 PRIMPOLQ96LW4 560 aa20.62■□□□□ 0.89
PTCD3-204ENST00000418628 C2orf40Q9H1Z8 148 aa20.62■□□□□ 0.89
PTCD3-204ENST00000418628 NKX2-4Q9H2Z4 354 aa20.62■□□□□ 0.89
PTCD3-204ENST00000418628 RNF19AQ9NV58 838 aa20.62■□□□□ 0.89
PTCD3-204ENST00000418628 DACT1Q9NYF0 836 aa20.62■□□□□ 0.89
PTCD3-204ENST00000418628 MSRAQ9UJ68 235 aa20.62■□□□□ 0.89
PTCD3-204ENST00000418628 INSL6Q9Y581 213 aa20.62■□□□□ 0.89
PTCD3-204ENST00000418628 CNTNAP2Q9UHC6 1331 aa20.61■□□□□ 0.89
PTCD3-204ENST00000418628 NPHP3-ACAD11A0A0J9YXS1 232 aa20.61■□□□□ 0.89
PTCD3-204ENST00000418628 A0A0U1RQF3 1178 aa20.61■□□□□ 0.89
PTCD3-204ENST00000418628 FAM237AA0A1B0GTK4 181 aa20.61■□□□□ 0.89
PTCD3-204ENST00000418628 DGKIO75912 1065 aa20.61■□□□□ 0.89
PTCD3-204ENST00000418628 CA3P07451 260 aa20.61■□□□□ 0.89
PTCD3-204ENST00000418628 LINC00271P0C7V0 271 aa20.61■□□□□ 0.89
PTCD3-204ENST00000418628 AXLP30530 894 aa20.61■□□□□ 0.89
PTCD3-204ENST00000418628 NPTX2P47972 431 aa20.61■□□□□ 0.89
PTCD3-204ENST00000418628 GIT2Q14161 759 aa20.61■□□□□ 0.89
PTCD3-204ENST00000418628 UBXN11Q5T124 520 aa20.61■□□□□ 0.89
PTCD3-204ENST00000418628 ADALQ6DHV7 355 aa20.61■□□□□ 0.89
PTCD3-204ENST00000418628 SPIRE2Q8WWL2 714 aa20.61■□□□□ 0.89
PTCD3-204ENST00000418628 IFT74Q96LB3 600 aa20.61■□□□□ 0.89
PTCD3-204ENST00000418628 NTPCRQ9BSD7 190 aaKnown RBP20.61■□□□□ 0.89
PTCD3-204ENST00000418628 KIFC3Q9BVG8 833 aa20.61■□□□□ 0.89
PTCD3-204ENST00000418628 TMEM161AQ9NX61 479 aa20.61■□□□□ 0.89
PTCD3-204ENST00000418628 PIN4Q9Y237 131 aaKnown RBP20.61■□□□□ 0.89
PTCD3-204ENST00000418628 PHLPP2Q6ZVD8 1323 aa20.6■□□□□ 0.89
PTCD3-204ENST00000418628 PRRC2BQ5JSZ5 2229 aaKnown RBP20.6■□□□□ 0.89
PTCD3-204ENST00000418628 INO80B-WBP1J3KQ70 363 aa20.6■□□□□ 0.89
PTCD3-204ENST00000418628 PLS3P13797 630 aa20.6■□□□□ 0.89
PTCD3-204ENST00000418628 ZSCAN20P17040 1043 aaPredicted RBP20.6■□□□□ 0.89
PTCD3-204ENST00000418628 ARF4P18085 180 aaPredicted RBP20.6■□□□□ 0.89
PTCD3-204ENST00000418628 STAT6P42226 847 aa20.6■□□□□ 0.89
PTCD3-204ENST00000418628 PEX3P56589 373 aa20.6■□□□□ 0.89
PTCD3-204ENST00000418628 DMP1Q13316 513 aaPredicted RBP20.6■□□□□ 0.89
PTCD3-204ENST00000418628 TAS1R3Q7RTX0 852 aa20.6■□□□□ 0.89
PTCD3-204ENST00000418628 ECHDC2Q86YB7 292 aa20.6■□□□□ 0.89
PTCD3-204ENST00000418628 ZBTB8OSQ8IWT0 167 aa20.6■□□□□ 0.89
PTCD3-204ENST00000418628 DNAJC19Q96DA6 116 aa20.6■□□□□ 0.89
PTCD3-204ENST00000418628 CCDC51Q96ER9 411 aa20.6■□□□□ 0.89
PTCD3-204ENST00000418628 FIZ1Q96SL8 496 aa20.6■□□□□ 0.89
PTCD3-204ENST00000418628 CUEDC2Q9H467 287 aa20.6■□□□□ 0.89
PTCD3-204ENST00000418628 PRMT7Q9NVM4 692 aaPredicted RBP20.6■□□□□ 0.89
PTCD3-204ENST00000418628 KBTBD4Q9NVX7 518 aa20.6■□□□□ 0.89
PTCD3-204ENST00000418628 MYO7AQ13402 2215 aa20.59■□□□□ 0.89
PTCD3-204ENST00000418628 MYMKA6NI61 221 aa20.59■□□□□ 0.89
PTCD3-204ENST00000418628 ZNF623O75123 536 aa20.59■□□□□ 0.89
PTCD3-204ENST00000418628 ERLIN2O94905 339 aa20.59■□□□□ 0.89
PTCD3-204ENST00000418628 UPP2O95045 317 aa20.59■□□□□ 0.89
PTCD3-204ENST00000418628 STAG3L1P0CL83 205 aa20.59■□□□□ 0.89
PTCD3-204ENST00000418628 NCLP19338 710 aaKnown RBP20.59■□□□□ 0.89
PTCD3-204ENST00000418628 EFNA5P52803 228 aa20.59■□□□□ 0.89
PTCD3-204ENST00000418628 CACNB1Q02641 598 aaPredicted RBP20.59■□□□□ 0.89
PTCD3-204ENST00000418628 TAP1Q03518 808 aa20.59■□□□□ 0.89
PTCD3-204ENST00000418628 RAD51AP2Q09MP3 1159 aa20.59■□□□□ 0.89
PTCD3-204ENST00000418628 ZNF697Q5TEC3 545 aa20.59■□□□□ 0.89
PTCD3-204ENST00000418628 FAM117BQ6P1L5 589 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms