RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 GCNT4Q9P109 453 aa18.32■□□□□ 0.52
SSBP3-205ENST00000417664 REXO2Q9Y3B8 237 aaKnown RBP18.32■□□□□ 0.52
SSBP3-205ENST00000417664 KIAA0391O15091 583 aaKnown RBP18.31■□□□□ 0.52
SSBP3-205ENST00000417664 CTIFO43310 598 aaKnown RBP18.31■□□□□ 0.52
SSBP3-205ENST00000417664 KRT86O43790 486 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 SLC9A1P19634 815 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 GARTP22102 1010 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 RFX1P22670 979 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 ARL2P36404 184 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 MAMDC4Q6UXC1 1216 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 FBXO16Q8IX29 292 aaPredicted RBP18.31■□□□□ 0.52
SSBP3-205ENST00000417664 SPATA33Q96N06 139 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 CBWD1Q9BRT8 395 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 SMARCAD1Q9H4L7 1026 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 RBM47A0AV96 593 aaKnown RBP18.31■□□□□ 0.52
SSBP3-205ENST00000417664 MAFO75444 373 aaPredicted RBP18.31■□□□□ 0.52
SSBP3-205ENST00000417664 ITGBL1O95965 494 aaPredicted RBP18.31■□□□□ 0.52
SSBP3-205ENST00000417664 ANXA13P27216 316 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 ARHGAP25P42331 645 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 VAMP7P51809 220 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 MKRN3Q13064 507 aaKnown RBP18.31■□□□□ 0.52
SSBP3-205ENST00000417664 LAMC2Q13753 1193 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 TUBB2AQ13885 445 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 HSDL1Q3SXM5 330 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 CST9Q5W186 159 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 HGSNATQ68CP4 663 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 KIAA1328Q86T90 577 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 ATP8B4Q8TF62 1192 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 GLG1Q92896 1179 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 VTI1AQ96AJ9 217 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 FBXL18Q96ME1 805 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 SPAG5Q96R06 1193 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 TUBB2BQ9BVA1 445 aa18.31■□□□□ 0.52
SSBP3-205ENST00000417664 LUC7LQ9NQ29 371 aaKnown RBP18.31■□□□□ 0.52
SSBP3-205ENST00000417664 AKR1B10O60218 316 aa18.3■□□□□ 0.52
SSBP3-205ENST00000417664 EIF4A3P38919 411 aaKnown RBP18.3■□□□□ 0.52
SSBP3-205ENST00000417664 KIF11P52732 1056 aa18.3■□□□□ 0.52
SSBP3-205ENST00000417664 VAV2P52735 878 aa18.3■□□□□ 0.52
SSBP3-205ENST00000417664 HUNKP57058 714 aa18.3■□□□□ 0.52
SSBP3-205ENST00000417664 STRN3Q13033 797 aa18.3■□□□□ 0.52
SSBP3-205ENST00000417664 GRB14Q14449 540 aa18.3■□□□□ 0.52
SSBP3-205ENST00000417664 ASTE1Q2TB18 679 aaPredicted RBP18.3■□□□□ 0.52
SSBP3-205ENST00000417664 CHADLQ6NUI6 762 aa18.3■□□□□ 0.52
SSBP3-205ENST00000417664 GPR142Q7Z601 462 aa18.3■□□□□ 0.52
SSBP3-205ENST00000417664 TCP11Q8WWU5 503 aa18.3■□□□□ 0.52
SSBP3-205ENST00000417664 PCIF1Q9H4Z3 704 aa18.3■□□□□ 0.52
SSBP3-205ENST00000417664 KIAA1586Q9HCI6 787 aa18.3■□□□□ 0.52
SSBP3-205ENST00000417664 SLC5A4Q9NY91 659 aa18.3■□□□□ 0.52
SSBP3-205ENST00000417664 PLXNB2O15031 1838 aa18.3■□□□□ 0.52
SSBP3-205ENST00000417664 RBAK-RBAKDNI3L0D1 243 aa18.29■□□□□ 0.52
SSBP3-205ENST00000417664 ADSSP30520 456 aa18.29■□□□□ 0.52
SSBP3-205ENST00000417664 MYL7Q01449 175 aa18.29■□□□□ 0.52
SSBP3-205ENST00000417664 ASIC2Q16515 512 aa18.29■□□□□ 0.52
SSBP3-205ENST00000417664 PLEKHH3Q7Z736 793 aa18.29■□□□□ 0.52
SSBP3-205ENST00000417664 MSL3Q8N5Y2 521 aaKnown RBP18.29■□□□□ 0.52
SSBP3-205ENST00000417664 EMID1Q96A84 441 aaPredicted RBP18.29■□□□□ 0.52
SSBP3-205ENST00000417664 WDR24Q96S15 920 aa18.29■□□□□ 0.52
SSBP3-205ENST00000417664 PTPN18Q99952 460 aa18.29■□□□□ 0.52
SSBP3-205ENST00000417664 KIFC3Q9BVG8 833 aa18.29■□□□□ 0.52
SSBP3-205ENST00000417664 TMEM134Q9H6X4 195 aa18.29■□□□□ 0.52
SSBP3-205ENST00000417664 SIX2Q9NPC8 291 aa18.29■□□□□ 0.52
SSBP3-205ENST00000417664 ADGRA3Q8IWK6 1321 aa18.29■□□□□ 0.52
SSBP3-205ENST00000417664 PLXNA1Q9UIW2 1896 aa18.29■□□□□ 0.52
SSBP3-205ENST00000417664 MANSC4A6NHS7 340 aaPredicted RBP18.28■□□□□ 0.52
SSBP3-205ENST00000417664 HNRNPDLO14979 420 aaKnown RBP18.28■□□□□ 0.52
SSBP3-205ENST00000417664 SLU7O95391 586 aaKnown RBP18.28■□□□□ 0.52
SSBP3-205ENST00000417664 PIGRP01833 764 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 GLRA2P23416 452 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 SOX10P56693 466 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 KIF5AQ12840 1032 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 IRF5Q13568 498 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 RAPGEF1Q13905 1077 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 SNRNP35Q16560 246 aaKnown RBP18.28■□□□□ 0.52
SSBP3-205ENST00000417664 TDRD12Q587J7 1177 aaKnown RBP18.28■□□□□ 0.52
SSBP3-205ENST00000417664 CCDC122Q5T0U0 273 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 IER5Q5VY09 327 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 RDH13Q8NBN7 331 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 DEPTORQ8TB45 409 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 TMC2Q8TDI7 906 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 TRPM7Q96QT4 1865 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 SLC15A5A6NIM6 579 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 TISP43B9A030 160 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 ANKRD63C9JTQ0 380 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 HBP1O60381 514 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 TLR2O60603 784 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 GH1P01241 217 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 ACTN1P12814 892 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 GTF2H1P32780 548 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 PRKCIP41743 596 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 JAM2P57087 298 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 KLHL30Q0D2K2 578 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 MXD4Q14582 209 aaPredicted RBP18.28■□□□□ 0.52
SSBP3-205ENST00000417664 ZNF569Q5MCW4 686 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 SLFN12LQ6IEE8 588 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 TAPT1Q6NXT6 567 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 DPP9Q86TI2 863 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 POMGNT1Q8WZA1 660 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 JAKMIP2Q96AA8 810 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 TMEM143Q96AN5 459 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 IFIH1Q9BYX4 1025 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms