RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 USP17L5A8MUK1 530 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 POTECB2RU33 542 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 E7ENQ6 273 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 PPP1R11O60927 126 aaPredicted RBP8.47□□□□□ -1.05
VRK2-203ENST00000417641 MED24O75448 989 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 TCEA3O75764 348 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 SNUPNO95149 360 aaKnown RBP8.47□□□□□ -1.05
VRK2-203ENST00000417641 GGPS1O95749 300 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 XRCC5P13010 732 aaKnown RBP8.47□□□□□ -1.05
VRK2-203ENST00000417641 PECAM1P16284 738 aaPredicted RBP8.47□□□□□ -1.05
VRK2-203ENST00000417641 PEX19P40855 299 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 CRKLP46109 303 aaKnown RBP8.47□□□□□ -1.05
VRK2-203ENST00000417641 CDK8P49336 464 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 CASP4P49662 377 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 RAB27AP51159 221 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 RWDD2BP57060 319 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 LACTBP83111 547 aaPredicted RBP8.47□□□□□ -1.05
VRK2-203ENST00000417641 MAP2K1Q02750 393 aaPredicted RBP8.47□□□□□ -1.05
VRK2-203ENST00000417641 MKRN3Q13064 507 aaKnown RBP8.47□□□□□ -1.05
VRK2-203ENST00000417641 PRPF4BQ13523 1007 aaKnown RBP8.47□□□□□ -1.05
VRK2-203ENST00000417641 RRP1BQ14684 758 aaKnown RBP8.47□□□□□ -1.05
VRK2-203ENST00000417641 TAF11Q15544 211 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 NBPF20Q3BBV1 942 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 NUGGCQ68CJ6 796 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 C11orf63Q6NUN7 778 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 POTEBQ6S5H4 581 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 BRINP3Q76B58 766 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 PALB2Q86YC2 1186 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 ENDOVQ8N8Q3 282 aaKnown RBP8.47□□□□□ -1.05
VRK2-203ENST00000417641 KRT35Q92764 455 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 ARHGEF2Q92974 986 aaKnown RBP8.47□□□□□ -1.05
VRK2-203ENST00000417641 MBOAT7Q96N66 472 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 RUNDC3BQ96NL0 473 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 STK33Q9BYT3 514 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 THAP2Q9H0W7 228 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 RNPEPL1Q9HAU8 725 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 TAS2R14Q9NYV8 317 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 TMOD4Q9NZQ9 345 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 MTRF1LQ9UGC7 380 aaKnown RBP8.47□□□□□ -1.05
VRK2-203ENST00000417641 ATF5Q9Y2D1 282 aaPredicted RBP8.47□□□□□ -1.05
VRK2-203ENST00000417641 STK38LQ9Y2H1 464 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 ASB3Q9Y575 518 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 ANKRD62A6NC57 917 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 MAP3K13O43283 966 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 NPTXRO95502 500 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 EYA4O95677 639 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 TPBGLP0DKB5 382 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 SNHG28P0DPA3 235 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 GM2AP17900 193 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 CALB2P22676 271 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 RXRBP28702 533 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 COILP38432 576 aaPredicted RBP8.47□□□□□ -1.05
VRK2-203ENST00000417641 MARCKSL1P49006 195 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 ATP11AP98196 1134 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 MTFR1Q15390 333 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 SGSM1Q2NKQ1 1148 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 SLC10A5Q5PT55 438 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 THEMIS2Q5TEJ8 643 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 PPP1R18Q6NYC8 613 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 TXNRD3Q86VQ6 643 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 CD101Q93033 1021 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 ZBTB10Q96DT7 871 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 NLRP3Q96P20 1036 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 TMEM237Q96Q45 408 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 EYA3Q99504 573 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 FAM167BQ9BTA0 163 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 OSBPL1AQ9BXW6 950 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 YIPF3Q9GZM5 350 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 LRMDAQ9H2I8 198 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 CDC42EP4Q9H3Q1 356 aaKnown RBP8.47□□□□□ -1.05
VRK2-203ENST00000417641 ETAA1Q9NY74 926 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 GCNT4Q9P109 453 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 CTNNAL1Q9UBT7 734 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 ZMYND8Q9ULU4 1186 aaPredicted RBP8.47□□□□□ -1.05
VRK2-203ENST00000417641 PCDHA12Q9UN75 941 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 ALG6Q9Y672 507 aa8.47□□□□□ -1.05
VRK2-203ENST00000417641 ABCA3Q99758 1704 aa8.46□□□□□ -1.05
VRK2-203ENST00000417641 TAF1P21675 1872 aa8.46□□□□□ -1.05
VRK2-203ENST00000417641 SYNGAP1Q96PV0 1343 aa8.46□□□□□ -1.05
VRK2-203ENST00000417641 MIF4GDA9UHW6 222 aaKnown RBP8.46□□□□□ -1.06
VRK2-203ENST00000417641 UBAP1LF5GYI3 381 aa8.46□□□□□ -1.06
VRK2-203ENST00000417641 CALUO43852 315 aaPredicted RBP8.46□□□□□ -1.06
VRK2-203ENST00000417641 NR3C1P04150 777 aa8.46□□□□□ -1.06
VRK2-203ENST00000417641 PLCG2P16885 1265 aa8.46□□□□□ -1.06
VRK2-203ENST00000417641 BRD2P25440 801 aaKnown RBP8.46□□□□□ -1.06
VRK2-203ENST00000417641 RFC4P35249 363 aa8.46□□□□□ -1.06
VRK2-203ENST00000417641 TUBP50607 506 aa8.46□□□□□ -1.06
VRK2-203ENST00000417641 SPIRE1Q08AE8 756 aa8.46□□□□□ -1.06
VRK2-203ENST00000417641 LBRQ14739 615 aaKnown RBP8.46□□□□□ -1.06
VRK2-203ENST00000417641 DRAP1Q14919 205 aaPredicted RBP8.46□□□□□ -1.06
VRK2-203ENST00000417641 GRIK5Q16478 980 aa8.46□□□□□ -1.06
VRK2-203ENST00000417641 UBE2SQ16763 222 aa8.46□□□□□ -1.06
VRK2-203ENST00000417641 LONRF1Q17RB8 773 aa8.46□□□□□ -1.06
VRK2-203ENST00000417641 AP1ARQ63HQ0 302 aa8.46□□□□□ -1.06
VRK2-203ENST00000417641 SPTY2D1Q68D10 685 aaPredicted RBP8.46□□□□□ -1.06
VRK2-203ENST00000417641 CWF19L1Q69YN2 538 aaKnown RBP8.46□□□□□ -1.06
VRK2-203ENST00000417641 APLFQ8IW19 511 aaPredicted RBP8.46□□□□□ -1.06
VRK2-203ENST00000417641 C12orf50Q8NA57 414 aaPredicted RBP8.46□□□□□ -1.06
VRK2-203ENST00000417641 MGARPQ8TDB4 240 aa8.46□□□□□ -1.06
VRK2-203ENST00000417641 KCNV2Q8TDN2 545 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms