RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 ZNF710Q8N1W2 664 aa17.6■□□□□ 0.41
HMGA1-204ENST00000401473 TMEM161BQ8NDZ6 487 aa17.6■□□□□ 0.41
HMGA1-204ENST00000401473 SPIRE2Q8WWL2 714 aa17.6■□□□□ 0.41
HMGA1-204ENST00000401473 SCLT1Q96NL6 688 aa17.6■□□□□ 0.41
HMGA1-204ENST00000401473 NFKBIZQ9BYH8 718 aa17.6■□□□□ 0.41
HMGA1-204ENST00000401473 KMT5AQ9NQR1 393 aa17.6■□□□□ 0.41
HMGA1-204ENST00000401473 ARHGAP28Q9P2N2 729 aa17.6■□□□□ 0.41
HMGA1-204ENST00000401473 MAGEA10P43363 369 aaPredicted RBP17.59■□□□□ 0.41
HMGA1-204ENST00000401473 SARSP49591 514 aaKnown RBP17.59■□□□□ 0.41
HMGA1-204ENST00000401473 CASP5P51878 434 aa17.59■□□□□ 0.41
HMGA1-204ENST00000401473 EPHB4P54760 987 aa17.59■□□□□ 0.41
HMGA1-204ENST00000401473 TFDP1Q14186 410 aa17.59■□□□□ 0.41
HMGA1-204ENST00000401473 PPP2R5AQ15172 486 aa17.59■□□□□ 0.41
HMGA1-204ENST00000401473 CDCA2Q69YH5 1023 aaPredicted RBP17.59■□□□□ 0.41
HMGA1-204ENST00000401473 TAS1R3Q7RTX0 852 aa17.59■□□□□ 0.41
HMGA1-204ENST00000401473 ZNF720Q7Z2F6 126 aa17.59■□□□□ 0.41
HMGA1-204ENST00000401473 GCOM2Q9BZD3 368 aaPredicted RBP17.59■□□□□ 0.41
HMGA1-204ENST00000401473 USP20Q9Y2K6 914 aa17.59■□□□□ 0.41
HMGA1-204ENST00000401473 TANC1Q9C0D5 1861 aa17.59■□□□□ 0.41
HMGA1-204ENST00000401473 NCKAP1LP55160 1127 aa17.58■□□□□ 0.41
HMGA1-204ENST00000401473 MBTD1Q05BQ5 628 aa17.58■□□□□ 0.41
HMGA1-204ENST00000401473 ZC2HC1CQ53FD0 456 aaPredicted RBP17.58■□□□□ 0.41
HMGA1-204ENST00000401473 C16orf59Q7L2K0 433 aa17.58■□□□□ 0.41
HMGA1-204ENST00000401473 DEFB128Q7Z7B8 93 aa17.58■□□□□ 0.41
HMGA1-204ENST00000401473 FAM228AQ86W67 206 aa17.58■□□□□ 0.41
HMGA1-204ENST00000401473 FAM178BQ8IXR5 827 aa17.58■□□□□ 0.41
HMGA1-204ENST00000401473 DEPTORQ8TB45 409 aa17.58■□□□□ 0.41
HMGA1-204ENST00000401473 CLSTN2Q9H4D0 955 aa17.58■□□□□ 0.41
HMGA1-204ENST00000401473 OLFML3Q9NRN5 406 aa17.58■□□□□ 0.41
HMGA1-204ENST00000401473 PADI3Q9ULW8 664 aa17.58■□□□□ 0.41
HMGA1-204ENST00000401473 LTBP2Q14767 1821 aa17.58■□□□□ 0.41
HMGA1-204ENST00000401473 TTLL13PA6NNM8 815 aa17.58■□□□□ 0.4
HMGA1-204ENST00000401473 INO80B-WBP1J3KQ70 363 aa17.58■□□□□ 0.4
HMGA1-204ENST00000401473 MBD3O95983 291 aa17.58■□□□□ 0.4
HMGA1-204ENST00000401473 EDN1P05305 212 aa17.58■□□□□ 0.4
HMGA1-204ENST00000401473 GAP43P17677 238 aa17.58■□□□□ 0.4
HMGA1-204ENST00000401473 CD52P31358 61 aa17.58■□□□□ 0.4
HMGA1-204ENST00000401473 SMTNP53814 917 aa17.58■□□□□ 0.4
HMGA1-204ENST00000401473 STK4Q13043 487 aa17.58■□□□□ 0.4
HMGA1-204ENST00000401473 TCTN1Q2MV58 587 aa17.58■□□□□ 0.4
HMGA1-204ENST00000401473 HAUS6Q7Z4H7 955 aa17.58■□□□□ 0.4
HMGA1-204ENST00000401473 SRGAP1Q7Z6B7 1085 aa17.58■□□□□ 0.4
HMGA1-204ENST00000401473 CCDC34Q96HJ3 373 aa17.58■□□□□ 0.4
HMGA1-204ENST00000401473 STRA6Q9BX79 667 aa17.58■□□□□ 0.4
HMGA1-204ENST00000401473 INO80BQ9C086 356 aaPredicted RBP17.58■□□□□ 0.4
HMGA1-204ENST00000401473 CCDC113Q9H0I3 377 aa17.58■□□□□ 0.4
HMGA1-204ENST00000401473 FZD8Q9H461 694 aa17.58■□□□□ 0.4
HMGA1-204ENST00000401473 SEL1LQ9UBV2 794 aa17.58■□□□□ 0.4
HMGA1-204ENST00000401473 ST3GAL5Q9UNP4 418 aa17.58■□□□□ 0.4
HMGA1-204ENST00000401473 RPS6KA5O75582 802 aa17.57■□□□□ 0.4
HMGA1-204ENST00000401473 CXCL10P02778 98 aa17.57■□□□□ 0.4
HMGA1-204ENST00000401473 PHKA2P46019 1235 aa17.57■□□□□ 0.4
HMGA1-204ENST00000401473 KCNA1Q09470 495 aa17.57■□□□□ 0.4
HMGA1-204ENST00000401473 AMHR2Q16671 573 aa17.57■□□□□ 0.4
HMGA1-204ENST00000401473 NT5DC1Q5TFE4 455 aa17.57■□□□□ 0.4
HMGA1-204ENST00000401473 TMEM199Q8N511 208 aa17.57■□□□□ 0.4
HMGA1-204ENST00000401473 DBF4BQ8NFT6 615 aa17.57■□□□□ 0.4
HMGA1-204ENST00000401473 GDF15Q99988 308 aa17.57■□□□□ 0.4
HMGA1-204ENST00000401473 MRPL44Q9H9J2 332 aaKnown RBP17.57■□□□□ 0.4
HMGA1-204ENST00000401473 TMEM63CQ9P1W3 806 aa17.57■□□□□ 0.4
HMGA1-204ENST00000401473 SQORQ9Y6N5 450 aa17.57■□□□□ 0.4
HMGA1-204ENST00000401473 DENND3A2RUS2 1198 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 K7ERI5 159 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 PPP1R37O75864 691 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 RHOBTB3O94955 611 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 MYBP10242 640 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 ACRP10323 421 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 MAPTP10636 758 aaKnown RBP17.56■□□□□ 0.4
HMGA1-204ENST00000401473 NFX1Q12986 1120 aaKnown RBP17.56■□□□□ 0.4
HMGA1-204ENST00000401473 PLEKHG4Q58EX7 1191 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 ISM2Q6H9L7 571 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 TSHZ1Q6ZSZ6 1077 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 GSDMAQ96QA5 445 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 LBHD1Q9BQE6 289 aaPredicted RBP17.56■□□□□ 0.4
HMGA1-204ENST00000401473 IFIH1Q9BYX4 1025 aaKnown RBP17.56■□□□□ 0.4
HMGA1-204ENST00000401473 NUP62CLQ9H1M0 184 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 SLC39A2Q9NP94 309 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 KIAA1468Q9P260 1216 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 KCNG1Q9UIX4 513 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 HOOK1Q9UJC3 728 aaKnown RBP17.56■□□□□ 0.4
HMGA1-204ENST00000401473 B4GALT5O43286 388 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 PARNO95453 639 aaKnown RBP17.56■□□□□ 0.4
HMGA1-204ENST00000401473 HOXA11P31270 313 aaPredicted RBP17.56■□□□□ 0.4
HMGA1-204ENST00000401473 GTF2BQ00403 316 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 FPGSQ05932 587 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 KCNB1Q14721 858 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 FAM26FQ5R3K3 315 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 USP38Q8NB14 1042 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 KIAA0895Q8NCT3 520 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 IKZF4Q9H2S9 585 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 TMX1Q9H3N1 280 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 ST6GALNAC4Q9H4F1 302 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 TMEM134Q9H6X4 195 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 ERVK-5Q9HDB9 667 aa17.56■□□□□ 0.4
HMGA1-204ENST00000401473 K7ENM7 598 aa17.55■□□□□ 0.4
HMGA1-204ENST00000401473 BMP6P22004 513 aa17.55■□□□□ 0.4
HMGA1-204ENST00000401473 EFNA5P52803 228 aa17.55■□□□□ 0.4
HMGA1-204ENST00000401473 KLHL40Q2TBA0 621 aa17.55■□□□□ 0.4
HMGA1-204ENST00000401473 ZBTB8OSQ8IWT0 167 aa17.55■□□□□ 0.4
HMGA1-204ENST00000401473 KCNN1Q92952 543 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms