RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 BHMG1C9JSJ3 638 aaPredicted RBP17.26■□□□□ 0.35
CHMP1A-201ENST00000397901 FGGP02679 453 aa17.26■□□□□ 0.35
CHMP1A-201ENST00000397901 NPR1P16066 1061 aa17.26■□□□□ 0.35
CHMP1A-201ENST00000397901 CDC25CP30307 473 aa17.26■□□□□ 0.35
CHMP1A-201ENST00000397901 COPB2P35606 906 aa17.26■□□□□ 0.35
CHMP1A-201ENST00000397901 GALCP54803 685 aa17.26■□□□□ 0.35
CHMP1A-201ENST00000397901 JAM2P57087 298 aa17.26■□□□□ 0.35
CHMP1A-201ENST00000397901 SNAP25P60880 206 aa17.26■□□□□ 0.35
CHMP1A-201ENST00000397901 MTMR3Q13615 1198 aa17.26■□□□□ 0.35
CHMP1A-201ENST00000397901 SLFN11Q7Z7L1 901 aa17.26■□□□□ 0.35
CHMP1A-201ENST00000397901 RASGEF1CQ8N431 466 aa17.26■□□□□ 0.35
CHMP1A-201ENST00000397901 CERS5Q8N5B7 392 aa17.26■□□□□ 0.35
CHMP1A-201ENST00000397901 SLC35C1Q96A29 364 aa17.26■□□□□ 0.35
CHMP1A-201ENST00000397901 P2RX7Q99572 595 aaKnown RBP17.26■□□□□ 0.35
CHMP1A-201ENST00000397901 NENFQ9UMX5 172 aa17.26■□□□□ 0.35
CHMP1A-201ENST00000397901 SFI1A8K8P3 1242 aa17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 PDXKO00764 312 aa17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 ASAP2O43150 1006 aa17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 SPATA31C1P0DKV0 1188 aa17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 ABCB4P21439 1286 aa17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 SPIRE1Q08AE8 756 aa17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 EPM2AIP1Q7L775 607 aaPredicted RBP17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 SLFN12Q8IYM2 578 aa17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 TEX9Q8N6V9 391 aa17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 LNX1Q8TBB1 728 aaPredicted RBP17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 SLITRK6Q9H5Y7 841 aa17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 ROR2Q01974 943 aaKnown RBP17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 SHROOM1Q2M3G4 852 aaPredicted RBP17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 ERMARDQ5T6L9 678 aa17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 GLYCTKQ8IVS8 523 aa17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 SYCE1Q8N0S2 351 aa17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 SYT2Q8N9I0 419 aaPredicted RBP17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 ANKRD27Q96NW4 1050 aa17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 XPO6Q96QU8 1125 aaKnown RBP17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 TSC22D3Q99576 134 aa17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 BHMT2Q9H2M3 363 aa17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 PAPOLBQ9NRJ5 636 aaKnown RBP17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 AMFRQ9UKV5 643 aa17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 ATP8A1Q9Y2Q0 1164 aa17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 UTP11Q9Y3A2 253 aaKnown RBP17.25■□□□□ 0.35
CHMP1A-201ENST00000397901 TTC36A6NLP5 189 aa17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 PLSCR1O15162 318 aa17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 EVI5O60447 810 aa17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 NQO1P15559 274 aaKnown RBP17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 TAL1P17542 331 aaPredicted RBP17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 ATP4AP20648 1035 aa17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 ARHGAP4P98171 946 aa17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 ERMNQ8TAM6 284 aa17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 ETNPPLQ8TBG4 499 aa17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 HES6Q96HZ4 224 aa17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 RUSC1Q9BVN2 902 aa17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 MXD3Q9BW11 206 aa17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 FAM129AQ9BZQ8 928 aa17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 TYW1Q9NV66 732 aaKnown RBP17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 GOLGA6L10A0A0M3HER8 536 aa17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 F8VZ95 297 aa17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 CCNG1P51959 295 aa17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 ZC3H12CQ9C0D7 883 aaKnown RBP17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 PPP1R9AQ9ULJ8 1098 aa17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 IGSF9BQ9UPX0 1349 aa17.24■□□□□ 0.35
CHMP1A-201ENST00000397901 CYP3A7-CYP3A51PA0A087WV96 503 aa17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 A0A0A6YYK5 440 aaPredicted RBP17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 TBCAO75347 108 aaKnown RBP17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 CYP3A7P24462 503 aa17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 GCLCP48506 637 aaPredicted RBP17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 SCNN1DP51172 638 aa17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 CCDC38Q502W7 563 aa17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 APLFQ8IW19 511 aaPredicted RBP17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 RPUSD2Q8IZ73 545 aaKnown RBP17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 SLC35G2Q8TBE7 412 aa17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 MDM1Q8TC05 714 aa17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 METTL14Q9HCE5 456 aaKnown RBP17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 USP40Q9NVE5 1235 aa17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 FAM196BA6NMK8 535 aa17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 MEIS2O14770 477 aa17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 RPL13P26373 211 aaKnown RBP17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 RPA1P27694 616 aa17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 PDE6BP35913 854 aa17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 STAT1P42224 750 aa17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 ZNF211Q13398 564 aaPredicted RBP17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 TBC1D25Q3MII6 688 aa17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 PIGWQ7Z7B1 504 aa17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 PSMD1Q99460 953 aa17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 FAM114A2Q9NRY5 505 aa17.23■□□□□ 0.35
CHMP1A-201ENST00000397901 ADAMTSL1Q8N6G6 1762 aa17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 POLD1P28340 1107 aa17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 ALDH1B1P30837 517 aa17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 USH1GQ495M9 461 aa17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 DCAF12L1Q5VU92 463 aa17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 TRPM8Q7Z2W7 1104 aa17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 ATP8B4Q8TF62 1192 aa17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 MBOAT7Q96N66 472 aa17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 ZNF317Q96PQ6 595 aaPredicted RBP17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 FMO2Q99518 471 aa17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 OSBPL1AQ9BXW6 950 aa17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 GOPCQ9HD26 462 aa17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 SEPT11Q9NVA2 429 aaKnown RBP17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 KIF13BQ9NQT8 1826 aa17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 FAM86B1E9PN63 330 aa17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 CTNND1O60716 968 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms