RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 RAD9AQ99638 391 aa23.44■■□□□ 1.34
TSPAN4-206ENST00000397408 PANK2Q9BZ23 570 aa23.44■■□□□ 1.34
TSPAN4-206ENST00000397408 AGPAT5Q9NUQ2 364 aa23.44■■□□□ 1.34
TSPAN4-206ENST00000397408 NPHP3-ACAD11A0A0J9YXS1 232 aa23.43■■□□□ 1.34
TSPAN4-206ENST00000397408 C9IYK1 514 aa23.43■■□□□ 1.34
TSPAN4-206ENST00000397408 ERLIN2O94905 339 aa23.43■■□□□ 1.34
TSPAN4-206ENST00000397408 STAT6P42226 847 aa23.43■■□□□ 1.34
TSPAN4-206ENST00000397408 CACNB1Q02641 598 aaPredicted RBP23.43■■□□□ 1.34
TSPAN4-206ENST00000397408 NAALADL2Q58DX5 795 aa23.43■■□□□ 1.34
TSPAN4-206ENST00000397408 ARSHQ5FYA8 562 aa23.43■■□□□ 1.34
TSPAN4-206ENST00000397408 ZNF697Q5TEC3 545 aa23.43■■□□□ 1.34
TSPAN4-206ENST00000397408 NPAS4Q8IUM7 802 aa23.43■■□□□ 1.34
TSPAN4-206ENST00000397408 ZBTB8OSQ8IWT0 167 aa23.43■■□□□ 1.34
TSPAN4-206ENST00000397408 YME1L1Q96TA2 773 aa23.43■■□□□ 1.34
TSPAN4-206ENST00000397408 KIFC3Q9BVG8 833 aa23.43■■□□□ 1.34
TSPAN4-206ENST00000397408 LCHNA4D1U4 455 aa23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 SCAND2PQ9GZW5 306 aaPredicted RBP23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 C2orf40Q9H1Z8 148 aa23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 CHST12Q9NRB3 414 aa23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 DACT1Q9NYF0 836 aa23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 INSL6Q9Y581 213 aa23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 ADGRA3Q8IWK6 1321 aa23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 TMEM265A0A087WTH1 108 aa23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 TSPAN1O60635 241 aa23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 STAG3L1P0CL83 205 aa23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 PEX3P56589 373 aa23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 HTRA4P83105 476 aaPredicted RBP23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 DMP1Q13316 513 aaPredicted RBP23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 PCBP1Q15365 356 aaKnown RBP eCLIP23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 PPP2R2DQ66LE6 453 aa23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 TWF2Q6IBS0 349 aaKnown RBP23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 Q7L0L9 218 aa23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 SLC28A3Q9HAS3 691 aa23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 LRFN2Q9ULH4 789 aa23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 CIZ1Q9ULV3 898 aaPredicted RBP23.42■■□□□ 1.34
TSPAN4-206ENST00000397408 SFI1A8K8P3 1242 aa23.41■■□□□ 1.34
TSPAN4-206ENST00000397408 KRT18P05783 430 aaKnown RBP23.41■■□□□ 1.34
TSPAN4-206ENST00000397408 AMHR2Q16671 573 aa23.41■■□□□ 1.34
TSPAN4-206ENST00000397408 CRIPAKQ8N1N5 446 aa23.41■■□□□ 1.34
TSPAN4-206ENST00000397408 REEP2Q9BRK0 252 aa23.41■■□□□ 1.34
TSPAN4-206ENST00000397408 TTYH1Q9H313 450 aaPredicted RBP23.41■■□□□ 1.34
TSPAN4-206ENST00000397408 CHD9Q3L8U1 2897 aa23.4■■□□□ 1.34
TSPAN4-206ENST00000397408 MYH11P35749 1972 aa23.4■■□□□ 1.34
TSPAN4-206ENST00000397408 CCDC169A6NNP5 214 aa23.4■■□□□ 1.34
TSPAN4-206ENST00000397408 ARHGEF15O94989 841 aa23.4■■□□□ 1.34
TSPAN4-206ENST00000397408 HOXA11P31270 313 aaPredicted RBP23.4■■□□□ 1.34
TSPAN4-206ENST00000397408 NPTX2P47972 431 aa23.4■■□□□ 1.34
TSPAN4-206ENST00000397408 RESP18Q5W5W9 173 aa23.4■■□□□ 1.34
TSPAN4-206ENST00000397408 FAM161BQ96MY7 647 aa23.4■■□□□ 1.34
TSPAN4-206ENST00000397408 C17orf75Q9HAS0 396 aa23.4■■□□□ 1.34
TSPAN4-206ENST00000397408 GDPD2Q9HCC8 539 aa23.4■■□□□ 1.34
TSPAN4-206ENST00000397408 PRMT7Q9NVM4 692 aaPredicted RBP23.4■■□□□ 1.34
TSPAN4-206ENST00000397408 FAM13BQ9NYF5 915 aa23.4■■□□□ 1.34
TSPAN4-206ENST00000397408 ODF2LQ9ULJ1 636 aa23.4■■□□□ 1.34
TSPAN4-206ENST00000397408 PCDHB7Q9Y5E2 793 aa23.4■■□□□ 1.34
TSPAN4-206ENST00000397408 B4GALT5O43286 388 aa23.39■■□□□ 1.33
TSPAN4-206ENST00000397408 PLS3P13797 630 aa23.39■■□□□ 1.33
TSPAN4-206ENST00000397408 LIG1P18858 919 aa23.39■■□□□ 1.33
TSPAN4-206ENST00000397408 FAM189BP81408 668 aa23.39■■□□□ 1.33
TSPAN4-206ENST00000397408 PPP4R3CPQ6ZMV5 832 aa23.39■■□□□ 1.33
TSPAN4-206ENST00000397408 SV2BQ7L1I2 683 aa23.39■■□□□ 1.33
TSPAN4-206ENST00000397408 ECHDC2Q86YB7 292 aa23.39■■□□□ 1.33
TSPAN4-206ENST00000397408 DEFB123Q8N688 67 aa23.39■■□□□ 1.33
TSPAN4-206ENST00000397408 DHX58Q96C10 678 aa23.39■■□□□ 1.33
TSPAN4-206ENST00000397408 CPB2Q96IY4 423 aa23.39■■□□□ 1.33
TSPAN4-206ENST00000397408 ZNF576Q9H609 170 aa23.39■■□□□ 1.33
TSPAN4-206ENST00000397408 RC3H2Q9HBD1 1191 aaKnown RBP23.39■■□□□ 1.33
TSPAN4-206ENST00000397408 KMT5AQ9NQR1 393 aa23.39■■□□□ 1.33
TSPAN4-206ENST00000397408 RNF216Q9NWF9 866 aaPredicted RBP23.39■■□□□ 1.33
TSPAN4-206ENST00000397408 TMEM161AQ9NX61 479 aa23.39■■□□□ 1.33
TSPAN4-206ENST00000397408 A0A0U1RQF3 1178 aa23.38■■□□□ 1.33
TSPAN4-206ENST00000397408 TBCAO75347 108 aaKnown RBP23.38■■□□□ 1.33
TSPAN4-206ENST00000397408 DGKIO75912 1065 aa23.38■■□□□ 1.33
TSPAN4-206ENST00000397408 PRKCBP05771 671 aa23.38■■□□□ 1.33
TSPAN4-206ENST00000397408 ARF4P18085 180 aaPredicted RBP23.38■■□□□ 1.33
TSPAN4-206ENST00000397408 AXLP30530 894 aa23.38■■□□□ 1.33
TSPAN4-206ENST00000397408 EFNA5P52803 228 aa23.38■■□□□ 1.33
TSPAN4-206ENST00000397408 NCBP1Q09161 790 aaKnown RBP23.38■■□□□ 1.33
TSPAN4-206ENST00000397408 GIT2Q14161 759 aa23.38■■□□□ 1.33
TSPAN4-206ENST00000397408 E2F4Q16254 413 aa23.38■■□□□ 1.33
TSPAN4-206ENST00000397408 MAPK6Q16659 721 aa23.38■■□□□ 1.33
TSPAN4-206ENST00000397408 RNF169Q8NCN4 708 aa23.38■■□□□ 1.33
TSPAN4-206ENST00000397408 SP7Q8TDD2 431 aaPredicted RBP23.38■■□□□ 1.33
TSPAN4-206ENST00000397408 PRIMPOLQ96LW4 560 aa23.38■■□□□ 1.33
TSPAN4-206ENST00000397408 TRAIPQ9BWF2 469 aa23.38■■□□□ 1.33
TSPAN4-206ENST00000397408 CCDC113Q9H0I3 377 aa23.38■■□□□ 1.33
TSPAN4-206ENST00000397408 FZD8Q9H461 694 aa23.38■■□□□ 1.33
TSPAN4-206ENST00000397408 ELAC1Q9H777 363 aaKnown RBP23.38■■□□□ 1.33
TSPAN4-206ENST00000397408 COL4A6Q14031 1691 aa23.37■■□□□ 1.33
TSPAN4-206ENST00000397408 FAM13AO94988 1023 aa23.37■■□□□ 1.33
TSPAN4-206ENST00000397408 GATMP50440 423 aa23.37■■□□□ 1.33
TSPAN4-206ENST00000397408 TAP1Q03518 808 aa23.37■■□□□ 1.33
TSPAN4-206ENST00000397408 FAM187BQ17R55 369 aa23.37■■□□□ 1.33
TSPAN4-206ENST00000397408 ADALQ6DHV7 355 aa23.37■■□□□ 1.33
TSPAN4-206ENST00000397408 NOTUMQ6P988 496 aa23.37■■□□□ 1.33
TSPAN4-206ENST00000397408 SEMA6BQ9H3T3 888 aa23.37■■□□□ 1.33
TSPAN4-206ENST00000397408 FAM105AQ9NUU6 356 aa23.37■■□□□ 1.33
TSPAN4-206ENST00000397408 LARSQ9P2J5 1176 aaKnown RBP23.37■■□□□ 1.33
TSPAN4-206ENST00000397408 ARHGAP28Q9P2N2 729 aa23.37■■□□□ 1.33
TSPAN4-206ENST00000397408 PHLPP2Q6ZVD8 1323 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms