RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 SCLT1Q96NL6 688 aa25.91■■□□□ 1.74
TSPAN4-202ENST00000397396 FGFBP2Q9BYJ0 223 aa25.91■■□□□ 1.74
TSPAN4-202ENST00000397396 MCOLN1Q9GZU1 580 aa25.91■■□□□ 1.74
TSPAN4-202ENST00000397396 HTTP42858 3142 aa25.91■■□□□ 1.74
TSPAN4-202ENST00000397396 GRIN2DO15399 1336 aa25.91■■□□□ 1.74
TSPAN4-202ENST00000397396 ARVCFO00192 962 aa25.9■■□□□ 1.74
TSPAN4-202ENST00000397396 PDXKO00764 312 aa25.9■■□□□ 1.74
TSPAN4-202ENST00000397396 CALUO43852 315 aaPredicted RBP25.9■■□□□ 1.74
TSPAN4-202ENST00000397396 PRPF6O94906 941 aaKnown RBP25.9■■□□□ 1.74
TSPAN4-202ENST00000397396 PTGISQ16647 500 aa25.9■■□□□ 1.74
TSPAN4-202ENST00000397396 RPAINQ86UA6 219 aa25.9■■□□□ 1.74
TSPAN4-202ENST00000397396 SERINC5Q86VE9 423 aa25.9■■□□□ 1.74
TSPAN4-202ENST00000397396 IFNLR1Q8IU57 520 aaPredicted RBP25.9■■□□□ 1.74
TSPAN4-202ENST00000397396 NELFCDQ8IXH7 590 aa25.9■■□□□ 1.74
TSPAN4-202ENST00000397396 SYCP3Q8IZU3 236 aa25.9■■□□□ 1.74
TSPAN4-202ENST00000397396 GLIS3Q8NEA6 775 aa25.9■■□□□ 1.74
TSPAN4-202ENST00000397396 FAM49AQ9H0Q0 323 aaPredicted RBP25.9■■□□□ 1.74
TSPAN4-202ENST00000397396 TYW1Q9NV66 732 aaKnown RBP25.9■■□□□ 1.74
TSPAN4-202ENST00000397396 TBX20Q9UMR3 447 aa25.9■■□□□ 1.74
TSPAN4-202ENST00000397396 MROH7Q68CQ1 1323 aa25.9■■□□□ 1.74
TSPAN4-202ENST00000397396 K7ERI5 159 aa25.89■■□□□ 1.74
TSPAN4-202ENST00000397396 M0QZ92 97 aa25.89■■□□□ 1.74
TSPAN4-202ENST00000397396 FGFR1OPO95684 399 aaKnown RBP25.89■■□□□ 1.74
TSPAN4-202ENST00000397396 GPC3P51654 580 aa25.89■■□□□ 1.74
TSPAN4-202ENST00000397396 PTK7Q13308 1070 aa25.89■■□□□ 1.74
TSPAN4-202ENST00000397396 IQCB1Q15051 598 aa25.89■■□□□ 1.74
TSPAN4-202ENST00000397396 ZC2HC1CQ53FD0 456 aaPredicted RBP25.89■■□□□ 1.74
TSPAN4-202ENST00000397396 SPATA1Q5VX52 437 aa25.89■■□□□ 1.74
TSPAN4-202ENST00000397396 NOC3LQ8WTT2 800 aaKnown RBP25.89■■□□□ 1.74
TSPAN4-202ENST00000397396 NLRP7Q8WX94 980 aa25.89■■□□□ 1.74
TSPAN4-202ENST00000397396 ZBTB10Q96DT7 871 aa25.89■■□□□ 1.74
TSPAN4-202ENST00000397396 INO80BQ9C086 356 aaPredicted RBP25.89■■□□□ 1.74
TSPAN4-202ENST00000397396 GBP3Q9H0R5 595 aa25.89■■□□□ 1.74
TSPAN4-202ENST00000397396 TRAF3IP3Q9Y228 551 aa25.89■■□□□ 1.74
TSPAN4-202ENST00000397396 ADGRA3Q8IWK6 1321 aa25.89■■□□□ 1.74
TSPAN4-202ENST00000397396 CAND2O75155 1236 aa25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 SRGAP2CP0DJJ0 459 aa25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 PTENP60484 403 aa25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 HIC1Q14526 733 aa25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 PCBP1Q15365 356 aaKnown RBP eCLIP25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 MAPK6Q16659 721 aa25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 EDRF1Q3B7T1 1238 aa25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 RUFY4Q6ZNE9 571 aa25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 SRGAP1Q7Z6B7 1085 aa25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 DHX40Q8IX18 779 aaKnown RBP25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 RNF214Q8ND24 703 aa25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 DNAJB3Q8WWF6 145 aa25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 KIFC3Q9BVG8 833 aa25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 KCTD10Q9H3F6 313 aa25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 EVPLQ92817 2033 aa25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 VTNP04004 478 aa25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 STX17P56962 302 aa25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 ZNF200P98182 395 aaPredicted RBP25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 HSP90AA2PQ14568 343 aaPredicted RBP25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 TTI2Q6NXR4 508 aa25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 GCOM2Q9BZD3 368 aaPredicted RBP25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 RBSNQ9H1K0 784 aa25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 SEMA6BQ9H3T3 888 aa25.88■■□□□ 1.73
TSPAN4-202ENST00000397396 RPL13P26373 211 aaKnown RBP25.87■■□□□ 1.73
TSPAN4-202ENST00000397396 NLRP11P59045 1033 aaKnown RBP25.87■■□□□ 1.73
TSPAN4-202ENST00000397396 NFIL3Q16649 462 aa25.87■■□□□ 1.73
TSPAN4-202ENST00000397396 UVSSAQ2YD98 709 aa25.87■■□□□ 1.73
TSPAN4-202ENST00000397396 ZCWPW2Q504Y3 356 aa25.87■■□□□ 1.73
TSPAN4-202ENST00000397396 LUZP1Q86V48 1076 aa25.87■■□□□ 1.73
TSPAN4-202ENST00000397396 KSR1Q8IVT5 923 aa25.87■■□□□ 1.73
TSPAN4-202ENST00000397396 PPP1R13LQ8WUF5 828 aa25.87■■□□□ 1.73
TSPAN4-202ENST00000397396 PRIMPOLQ96LW4 560 aa25.87■■□□□ 1.73
TSPAN4-202ENST00000397396 PRMT7Q9NVM4 692 aaPredicted RBP25.87■■□□□ 1.73
TSPAN4-202ENST00000397396 NFE2L3Q9Y4A8 694 aa25.87■■□□□ 1.73
TSPAN4-202ENST00000397396 FKBP3Q00688 224 aaKnown RBP25.86■■□□□ 1.73
TSPAN4-202ENST00000397396 MYBPC2Q14324 1141 aa25.86■■□□□ 1.73
TSPAN4-202ENST00000397396 ANKRD40Q6AI12 368 aa25.86■■□□□ 1.73
TSPAN4-202ENST00000397396 FAM114A1Q8IWE2 563 aa25.86■■□□□ 1.73
TSPAN4-202ENST00000397396 CSGALNACT2Q8N6G5 542 aa25.86■■□□□ 1.73
TSPAN4-202ENST00000397396 CCDC155Q8N6L0 562 aa25.86■■□□□ 1.73
TSPAN4-202ENST00000397396 BICD1Q96G01 975 aa25.86■■□□□ 1.73
TSPAN4-202ENST00000397396 MRPL4Q9BYD3 311 aaKnown RBP25.86■■□□□ 1.73
TSPAN4-202ENST00000397396 CCDC113Q9H0I3 377 aa25.86■■□□□ 1.73
TSPAN4-202ENST00000397396 ZMYM2Q9UBW7 1377 aa25.85■■□□□ 1.73
TSPAN4-202ENST00000397396 SIP14410 1827 aa25.85■■□□□ 1.73
TSPAN4-202ENST00000397396 A0A087WZ62 844 aa25.85■■□□□ 1.73
TSPAN4-202ENST00000397396 FSD2A1L4K1 749 aa25.85■■□□□ 1.73
TSPAN4-202ENST00000397396 INO80B-WBP1J3KQ70 363 aa25.85■■□□□ 1.73
TSPAN4-202ENST00000397396 TLR3O15455 904 aaKnown RBP25.85■■□□□ 1.73
TSPAN4-202ENST00000397396 PIGRP01833 764 aa25.85■■□□□ 1.73
TSPAN4-202ENST00000397396 PRKCBP05771 671 aa25.85■■□□□ 1.73
TSPAN4-202ENST00000397396 MRPS6P82932 125 aaKnown RBP25.85■■□□□ 1.73
TSPAN4-202ENST00000397396 FAM187BQ17R55 369 aa25.85■■□□□ 1.73
TSPAN4-202ENST00000397396 ZPBP2Q6X784 338 aa25.85■■□□□ 1.73
TSPAN4-202ENST00000397396 CEP63Q96MT8 703 aa25.85■■□□□ 1.73
TSPAN4-202ENST00000397396 FDXACB1Q9BRP7 624 aaPredicted RBP25.85■■□□□ 1.73
TSPAN4-202ENST00000397396 ADAMTS10Q9H324 1103 aa25.85■■□□□ 1.73
TSPAN4-202ENST00000397396 IFT122Q9HBG6 1241 aa25.85■■□□□ 1.73
TSPAN4-202ENST00000397396 TRIM49BA6NDI0 452 aa25.84■■□□□ 1.73
TSPAN4-202ENST00000397396 HNRNPDLO14979 420 aaKnown RBP25.84■■□□□ 1.73
TSPAN4-202ENST00000397396 GPR32O75388 356 aa25.84■■□□□ 1.73
TSPAN4-202ENST00000397396 HOXD13P35453 343 aa25.84■■□□□ 1.73
TSPAN4-202ENST00000397396 LIG4P49917 911 aa25.84■■□□□ 1.73
TSPAN4-202ENST00000397396 CDK7P50613 346 aa25.84■■□□□ 1.73
TSPAN4-202ENST00000397396 CRYBB1P53674 252 aaPredicted RBP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms