RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 TCP11X1B4DZS4 312 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 PPP1R11O60927 126 aaPredicted RBP10.04□□□□□ -0.8
UCA1-201ENST00000397381 GAP43P17677 238 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 ABCB4P21439 1286 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 RFX1P22670 979 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 RPA1P27694 616 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 PSMC2P35998 433 aaKnown RBP10.04□□□□□ -0.8
UCA1-201ENST00000397381 CASP4P49662 377 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 ATP11AP98196 1134 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 ICA1Q05084 483 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 GRIK5Q16478 980 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 CYP1B1Q16678 543 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 EP400NLQ6ZTU2 488 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 EXOC3L1Q86VI1 746 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 FAM186BQ8IYM0 893 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 KCTD17Q8N5Z5 321 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 C18orf8Q96DM3 657 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 ACSBG1Q96GR2 724 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 ZNF570Q96NI8 536 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 RPS6KC1Q96S38 1066 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 TRIM7Q9C029 511 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 CCDC113Q9H0I3 377 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 RXFP1Q9HBX9 757 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 MTUS1Q9ULD2 1270 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 ALG6Q9Y672 507 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 FRMPD4Q14CM0 1322 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 MYO3BQ8WXR4 1341 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 PASKQ96RG2 1323 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 ZNF831Q5JPB2 1677 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 IGKV6D-41A0A0C4DH26 115 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 ZBTB5O15062 677 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 TBX3O15119 743 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 TBCAO75347 108 aaKnown RBP10.04□□□□□ -0.8
UCA1-201ENST00000397381 ECM2O94769 699 aaPredicted RBP10.04□□□□□ -0.8
UCA1-201ENST00000397381 MKRN4PQ13434 485 aaPredicted RBP10.04□□□□□ -0.8
UCA1-201ENST00000397381 KIF22Q14807 665 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 GPATCH4Q5T3I0 446 aaKnown RBP10.04□□□□□ -0.8
UCA1-201ENST00000397381 SEL1L2Q5TEA6 688 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 CHADLQ6NUI6 762 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 C15orf52Q6ZUT6 534 aaKnown RBP10.04□□□□□ -0.8
UCA1-201ENST00000397381 ASRGL1Q7L266 308 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 SPATA21Q7Z572 469 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 CATSPER3Q86XQ3 398 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 SLF2Q8IX21 1173 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 CKAP2Q8WWK9 683 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 VTI1AQ96AJ9 217 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 ZSWIM1Q9BR11 485 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 THAP2Q9H0W7 228 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 SLC5A4Q9NY91 659 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 CORO1CQ9ULV4 474 aaPredicted RBP10.04□□□□□ -0.8
UCA1-201ENST00000397381 CD2APQ9Y5K6 639 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 COL24A1Q17RW2 1714 aa10.04□□□□□ -0.8
UCA1-201ENST00000397381 EIF3DO15371 548 aaKnown RBP eCLIP10.03□□□□□ -0.8
UCA1-201ENST00000397381 DIAPH2O60879 1101 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 SMNDC1O75940 238 aaKnown RBP eCLIP10.03□□□□□ -0.8
UCA1-201ENST00000397381 GCNT3O95395 438 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 KRT16P08779 473 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 FGFR4P22455 802 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 RFC4P35249 363 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 STAT3P40763 770 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 MSH2P43246 934 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 SLCO1A2P46721 670 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 FMO5P49326 533 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 CCDC15Q0P6D6 951 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 PABPC4Q13310 644 aaKnown RBP eCLIP10.03□□□□□ -0.84e-6■■□□□ 12.4
UCA1-201ENST00000397381 KCTD19Q17RG1 926 aaPredicted RBP10.03□□□□□ -0.8
UCA1-201ENST00000397381 ZNF568Q3ZCX4 644 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 TBC1D9BQ66K14 1250 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 CDCA2Q69YH5 1023 aaPredicted RBP10.03□□□□□ -0.8
UCA1-201ENST00000397381 CAPRIN2Q6IMN6 1127 aaKnown RBP10.03□□□□□ -0.8
UCA1-201ENST00000397381 TTC27Q6P3X3 843 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 CCDC137Q6PK04 289 aaKnown RBP10.03□□□□□ -0.8
UCA1-201ENST00000397381 KIRREL3Q8IZU9 778 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 LRRC47Q8N1G4 583 aaKnown RBP10.03□□□□□ -0.8
UCA1-201ENST00000397381 SPDL1Q96EA4 605 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 FAM163AQ96GL9 167 aaPredicted RBP10.03□□□□□ -0.8
UCA1-201ENST00000397381 RAB3IPQ96QF0 476 aaPredicted RBP10.03□□□□□ -0.8
UCA1-201ENST00000397381 WNT8AQ9H1J5 351 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 OLFML3Q9NRN5 406 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 USP40Q9NVE5 1235 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 FGFR1OP2Q9NVK5 253 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 TMOD4Q9NZQ9 345 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 PRKAG3Q9UGI9 489 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 DBR1Q9UK59 544 aaKnown RBP10.03□□□□□ -0.8
UCA1-201ENST00000397381 COG5Q9UP83 839 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 PCDHB13Q9Y5F0 798 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 TTLL1O95922 423 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 ATP2A2P16615 1042 aaKnown RBP10.03□□□□□ -0.8
UCA1-201ENST00000397381 GCKP35557 465 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 PDE6BP35913 854 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 COILP38432 576 aaPredicted RBP10.03□□□□□ -0.8
UCA1-201ENST00000397381 C11orf91Q3C1V1 193 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 RNF43Q68DV7 783 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 NBPF5PQ86XG9 351 aaPredicted RBP10.03□□□□□ -0.8
UCA1-201ENST00000397381 C12orf50Q8NA57 414 aaPredicted RBP10.03□□□□□ -0.8
UCA1-201ENST00000397381 UHMK1Q8TAS1 419 aaKnown RBP10.03□□□□□ -0.8
UCA1-201ENST00000397381 ARHGEF2Q92974 986 aaKnown RBP10.03□□□□□ -0.8
UCA1-201ENST00000397381 GRAMD1AQ96CP6 724 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 GPR88Q9GZN0 384 aa10.03□□□□□ -0.8
UCA1-201ENST00000397381 INTS2Q9H0H0 1204 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms