RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 A0A087WZ62 844 aa13.5□□□□□ -0.25
GAPDH-202ENST00000396856 FSD2A1L4K1 749 aa13.5□□□□□ -0.25
GAPDH-202ENST00000396856 DTNBO60941 627 aa13.5□□□□□ -0.25
GAPDH-202ENST00000396856 SKIP12755 728 aa13.5□□□□□ -0.25
GAPDH-202ENST00000396856 DNAJB1P25685 340 aa13.5□□□□□ -0.25
GAPDH-202ENST00000396856 PPM1AP35813 382 aa13.5□□□□□ -0.25
GAPDH-202ENST00000396856 NUBP1P53384 320 aa13.5□□□□□ -0.25
GAPDH-202ENST00000396856 POLGP54098 1239 aaPredicted RBP13.5□□□□□ -0.25
GAPDH-202ENST00000396856 NCAPH2Q6IBW4 605 aa13.5□□□□□ -0.25
GAPDH-202ENST00000396856 PDE12Q6L8Q7 609 aaKnown RBP13.5□□□□□ -0.25
GAPDH-202ENST00000396856 RHPN2Q8IUC4 686 aa13.5□□□□□ -0.25
GAPDH-202ENST00000396856 DIS3L2Q8IYB7 885 aaKnown RBP13.5□□□□□ -0.25
GAPDH-202ENST00000396856 THNSL1Q8IYQ7 743 aa13.5□□□□□ -0.25
GAPDH-202ENST00000396856 COLGALT1Q8NBJ5 622 aa13.5□□□□□ -0.25
GAPDH-202ENST00000396856 CASD1Q96PB1 797 aa13.5□□□□□ -0.25
GAPDH-202ENST00000396856 FDXACB1Q9BRP7 624 aaPredicted RBP13.5□□□□□ -0.25
GAPDH-202ENST00000396856 TRAIPQ9BWF2 469 aa13.5□□□□□ -0.25
GAPDH-202ENST00000396856 IGFLR1Q9H665 355 aa13.5□□□□□ -0.25
GAPDH-202ENST00000396856 DHX33Q9H6R0 707 aaKnown RBP13.5□□□□□ -0.25
GAPDH-202ENST00000396856 CWH43Q9H720 699 aa13.5□□□□□ -0.25
GAPDH-202ENST00000396856 PCDHA12Q9UN75 941 aa13.5□□□□□ -0.25
GAPDH-202ENST00000396856 LZTS1Q9Y250 596 aa13.5□□□□□ -0.25
GAPDH-202ENST00000396856 CARNS1A5YM72 827 aa13.49□□□□□ -0.25
GAPDH-202ENST00000396856 FAM205CA6NFA0 338 aa13.49□□□□□ -0.25
GAPDH-202ENST00000396856 BTBD18B2RXH4 712 aa13.49□□□□□ -0.25
GAPDH-202ENST00000396856 JAK2O60674 1132 aa13.49□□□□□ -0.25
GAPDH-202ENST00000396856 FGF18O76093 207 aa13.49□□□□□ -0.25
GAPDH-202ENST00000396856 CSPG5O95196 566 aa13.49□□□□□ -0.25
GAPDH-202ENST00000396856 SEC24BO95487 1268 aa13.49□□□□□ -0.25
GAPDH-202ENST00000396856 PDGFBP01127 241 aaPredicted RBP13.49□□□□□ -0.25
GAPDH-202ENST00000396856 FGFR4P22455 802 aa13.49□□□□□ -0.25
GAPDH-202ENST00000396856 YWHABP31946 246 aaKnown RBP13.49□□□□□ -0.25
GAPDH-202ENST00000396856 NPEPPSP55786 919 aa13.49□□□□□ -0.25
GAPDH-202ENST00000396856 SPIRE1Q08AE8 756 aa13.49□□□□□ -0.25
GAPDH-202ENST00000396856 SAFBQ15424 915 aaKnown RBP eCLIP13.49□□□□□ -0.25
GAPDH-202ENST00000396856 CALCRLQ16602 461 aa13.49□□□□□ -0.25
GAPDH-202ENST00000396856 EFHBQ8N7U6 833 aa13.49□□□□□ -0.25
GAPDH-202ENST00000396856 RNF169Q8NCN4 708 aa13.49□□□□□ -0.25
GAPDH-202ENST00000396856 TCP11Q8WWU5 503 aa13.49□□□□□ -0.25
GAPDH-202ENST00000396856 PSPC1Q8WXF1 523 aaKnown RBP13.49□□□□□ -0.25
GAPDH-202ENST00000396856 NLRP4Q96MN2 994 aa13.49□□□□□ -0.25
GAPDH-202ENST00000396856 LLPHQ9BRT6 129 aaKnown RBP13.49□□□□□ -0.25
GAPDH-202ENST00000396856 MRPL9Q9BYD2 267 aaKnown RBP13.49□□□□□ -0.25
GAPDH-202ENST00000396856 WRAP73Q9P2S5 460 aaPredicted RBP13.49□□□□□ -0.25
GAPDH-202ENST00000396856 PUF60Q9UHX1 559 aaKnown RBP13.49□□□□□ -0.25
GAPDH-202ENST00000396856 COL4A3BPQ9Y5P4 624 aa13.49□□□□□ -0.25
GAPDH-202ENST00000396856 KMT2BQ9UMN6 2715 aaPredicted RBP13.49□□□□□ -0.25
GAPDH-202ENST00000396856 KIAA1671Q9BY89 1806 aa13.48□□□□□ -0.25
GAPDH-202ENST00000396856 ASAP2O43150 1006 aa13.48□□□□□ -0.25
GAPDH-202ENST00000396856 GALR2O43603 387 aaPredicted RBP13.48□□□□□ -0.25
GAPDH-202ENST00000396856 NEMFO60524 1076 aa13.48□□□□□ -0.25
GAPDH-202ENST00000396856 CSDE1O75534 798 aaKnown RBP13.48□□□□□ -0.25
GAPDH-202ENST00000396856 GLP2RO95838 553 aa13.48□□□□□ -0.25
GAPDH-202ENST00000396856 NDUFV1P49821 464 aa13.48□□□□□ -0.25
GAPDH-202ENST00000396856 RAB27AP51159 221 aa13.48□□□□□ -0.25
GAPDH-202ENST00000396856 PLCB3Q01970 1234 aa13.48□□□□□ -0.25
GAPDH-202ENST00000396856 TWF2Q6IBS0 349 aaKnown RBP13.48□□□□□ -0.25
GAPDH-202ENST00000396856 CATSPER4Q7RTX7 472 aa13.48□□□□□ -0.25
GAPDH-202ENST00000396856 ADGRD2Q7Z7M1 963 aa13.48□□□□□ -0.25
GAPDH-202ENST00000396856 ZNF598Q86UK7 904 aaKnown RBP13.48□□□□□ -0.25
GAPDH-202ENST00000396856 MICAL1Q8TDZ2 1067 aa13.48□□□□□ -0.25
GAPDH-202ENST00000396856 DYDC2Q96IM9 177 aa13.48□□□□□ -0.25
GAPDH-202ENST00000396856 ZSCAN31Q96LW9 406 aaPredicted RBP13.48□□□□□ -0.25
GAPDH-202ENST00000396856 ZNF558Q96NG5 402 aa13.48□□□□□ -0.25
GAPDH-202ENST00000396856 CDCA3Q99618 268 aaPredicted RBP13.48□□□□□ -0.25
GAPDH-202ENST00000396856 TTC12Q9H892 705 aaPredicted RBP13.48□□□□□ -0.25
GAPDH-202ENST00000396856 RNF19AQ9NV58 838 aa13.48□□□□□ -0.25
GAPDH-202ENST00000396856 RGL1Q9NZL6 768 aa13.48□□□□□ -0.25
GAPDH-202ENST00000396856 PIN4Q9Y237 131 aaKnown RBP13.48□□□□□ -0.25
GAPDH-202ENST00000396856 FNDC1Q4ZHG4 1894 aaPredicted RBP13.48□□□□□ -0.25
GAPDH-202ENST00000396856 FRYLO94915 3013 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 SLITRK3O94933 977 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 LYPLA2O95372 231 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 PHKA2P46019 1235 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 ID4P47928 161 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 NRIP1P48552 1158 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 CYP4A11Q02928 519 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 KRT17Q04695 432 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 CTTNQ14247 550 aaKnown RBP13.47□□□□□ -0.25
GAPDH-202ENST00000396856 EMC2Q15006 297 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 XKR9Q5GH70 373 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 CLLU1OSQ5K130 101 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 KCNT2Q6UVM3 1135 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 LRRC55Q6ZSA7 311 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 SRGAP1Q7Z6B7 1085 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 TPH2Q8IWU9 490 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 PRPF31Q8WWY3 499 aaKnown RBP13.47□□□□□ -0.25
GAPDH-202ENST00000396856 SUSD6Q92537 303 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 MRPS27Q92552 414 aaKnown RBP13.47□□□□□ -0.25
GAPDH-202ENST00000396856 EIF2AK1Q9BQI3 630 aaKnown RBP13.47□□□□□ -0.25
GAPDH-202ENST00000396856 PHF7Q9BWX1 381 aaPredicted RBP13.47□□□□□ -0.25
GAPDH-202ENST00000396856 TLE6Q9H808 572 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 IFT122Q9HBG6 1241 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 HCSTQ9UBK5 93 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 USP15Q9Y4E8 981 aaPredicted RBP13.47□□□□□ -0.25
GAPDH-202ENST00000396856 EPG5Q9HCE0 2579 aa13.47□□□□□ -0.25
GAPDH-202ENST00000396856 ZNF623O75123 536 aa13.46□□□□□ -0.25
GAPDH-202ENST00000396856 ATF7P17544 494 aaPredicted RBP13.46□□□□□ -0.25
GAPDH-202ENST00000396856 TXKP42681 527 aa13.46□□□□□ -0.25
GAPDH-202ENST00000396856 FOSBP53539 338 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms