RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 AMPD3Q01432 767 aa21.21■□□□□ 0.99
HOXA9-202ENST00000396345 MBTD1Q05BQ5 628 aa21.21■□□□□ 0.99
HOXA9-202ENST00000396345 CDCA2Q69YH5 1023 aaPredicted RBP21.21■□□□□ 0.99
HOXA9-202ENST00000396345 DYMQ7RTS9 669 aa21.21■□□□□ 0.99
HOXA9-202ENST00000396345 CEP57L1Q8IYX8 460 aa21.21■□□□□ 0.99
HOXA9-202ENST00000396345 DDX12PQ92771 950 aa21.21■□□□□ 0.99
HOXA9-202ENST00000396345 STAMQ92783 540 aa21.21■□□□□ 0.99
HOXA9-202ENST00000396345 GOLPH3LQ9H4A5 285 aa21.21■□□□□ 0.99
HOXA9-202ENST00000396345 KBTBD4Q9NVX7 518 aa21.21■□□□□ 0.99
HOXA9-202ENST00000396345 USP25Q9UHP3 1055 aa21.21■□□□□ 0.99
HOXA9-202ENST00000396345 SERTAD1Q9UHV2 236 aa21.21■□□□□ 0.99
HOXA9-202ENST00000396345 KCNG1Q9UIX4 513 aa21.21■□□□□ 0.99
HOXA9-202ENST00000396345 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.2■□□□□ 0.98
HOXA9-202ENST00000396345 DENND3A2RUS2 1198 aa21.2■□□□□ 0.98
HOXA9-202ENST00000396345 ENPP3O14638 875 aa21.2■□□□□ 0.98
HOXA9-202ENST00000396345 PCBP1Q15365 356 aaKnown RBP eCLIP21.2■□□□□ 0.98
HOXA9-202ENST00000396345 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.2■□□□□ 0.98
HOXA9-202ENST00000396345 LINC01599Q8WXQ3 324 aa21.2■□□□□ 0.98
HOXA9-202ENST00000396345 KIFC3Q9BVG8 833 aa21.2■□□□□ 0.98
HOXA9-202ENST00000396345 TSPYL2Q9H2G4 693 aaPredicted RBP21.2■□□□□ 0.98
HOXA9-202ENST00000396345 ZHX3Q9H4I2 956 aa21.2■□□□□ 0.98
HOXA9-202ENST00000396345 LARSQ9P2J5 1176 aaKnown RBP21.2■□□□□ 0.98
HOXA9-202ENST00000396345 MGEA5O60502 916 aa21.19■□□□□ 0.98
HOXA9-202ENST00000396345 ERLIN2O94905 339 aa21.19■□□□□ 0.98
HOXA9-202ENST00000396345 AMHP03971 560 aa21.19■□□□□ 0.98
HOXA9-202ENST00000396345 SLFN14P0C7P3 912 aa21.19■□□□□ 0.98
HOXA9-202ENST00000396345 ZSCAN20P17040 1043 aaPredicted RBP21.19■□□□□ 0.98
HOXA9-202ENST00000396345 ZNF131P52739 623 aa21.19■□□□□ 0.98
HOXA9-202ENST00000396345 SMTNP53814 917 aa21.19■□□□□ 0.98
HOXA9-202ENST00000396345 DSC3Q14574 896 aa21.19■□□□□ 0.98
HOXA9-202ENST00000396345 LONRF3Q496Y0 759 aa21.19■□□□□ 0.98
HOXA9-202ENST00000396345 RTN4RL1Q86UN2 441 aaPredicted RBP21.19■□□□□ 0.98
HOXA9-202ENST00000396345 MYCT1Q8N699 235 aa21.19■□□□□ 0.98
HOXA9-202ENST00000396345 TMEM87AQ8NBN3 555 aa21.19■□□□□ 0.98
HOXA9-202ENST00000396345 SPIRE2Q8WWL2 714 aa21.19■□□□□ 0.98
HOXA9-202ENST00000396345 DNAJC19Q96DA6 116 aa21.19■□□□□ 0.98
HOXA9-202ENST00000396345 SLC9A7Q96T83 725 aa21.19■□□□□ 0.98
HOXA9-202ENST00000396345 ADAM2Q99965 735 aa21.19■□□□□ 0.98
HOXA9-202ENST00000396345 PARVGQ9HBI0 331 aa21.19■□□□□ 0.98
HOXA9-202ENST00000396345 KMT5AQ9NQR1 393 aa21.19■□□□□ 0.98
HOXA9-202ENST00000396345 CHST12Q9NRB3 414 aa21.19■□□□□ 0.98
HOXA9-202ENST00000396345 ACTN4O43707 911 aaKnown RBP21.18■□□□□ 0.98
HOXA9-202ENST00000396345 ATP2A2P16615 1042 aaKnown RBP21.18■□□□□ 0.98
HOXA9-202ENST00000396345 EFNA5P52803 228 aa21.18■□□□□ 0.98
HOXA9-202ENST00000396345 DEFB103AP81534 67 aa21.18■□□□□ 0.98
HOXA9-202ENST00000396345 NCBP1Q09161 790 aaKnown RBP21.18■□□□□ 0.98
HOXA9-202ENST00000396345 PHOSPHO2Q8TCD6 241 aa21.18■□□□□ 0.98
HOXA9-202ENST00000396345 NTPCRQ9BSD7 190 aaKnown RBP21.18■□□□□ 0.98
HOXA9-202ENST00000396345 RGS18Q9NS28 235 aa21.18■□□□□ 0.98
HOXA9-202ENST00000396345 PRMT7Q9NVM4 692 aaPredicted RBP21.18■□□□□ 0.98
HOXA9-202ENST00000396345 PIN4Q9Y237 131 aaKnown RBP21.18■□□□□ 0.98
HOXA9-202ENST00000396345 ADGRA3Q8IWK6 1321 aa21.18■□□□□ 0.98
HOXA9-202ENST00000396345 SLC16A4O15374 487 aa21.17■□□□□ 0.98
HOXA9-202ENST00000396345 AFMP43652 599 aa21.17■□□□□ 0.98
HOXA9-202ENST00000396345 AMHR2Q16671 573 aa21.17■□□□□ 0.98
HOXA9-202ENST00000396345 CLEC17AQ6ZS10 378 aa21.17■□□□□ 0.98
HOXA9-202ENST00000396345 MYOCDQ8IZQ8 938 aa21.17■□□□□ 0.98
HOXA9-202ENST00000396345 C7orf25Q9BPX7 421 aa21.17■□□□□ 0.98
HOXA9-202ENST00000396345 TRIM9Q9C026 710 aa21.17■□□□□ 0.98
HOXA9-202ENST00000396345 CCDC113Q9H0I3 377 aa21.17■□□□□ 0.98
HOXA9-202ENST00000396345 FZD8Q9H461 694 aa21.17■□□□□ 0.98
HOXA9-202ENST00000396345 C1orf112Q9NSG2 853 aa21.17■□□□□ 0.98
HOXA9-202ENST00000396345 AGPAT5Q9NUQ2 364 aa21.17■□□□□ 0.98
HOXA9-202ENST00000396345 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.16■□□□□ 0.98
HOXA9-202ENST00000396345 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.16■□□□□ 0.98
HOXA9-202ENST00000396345 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.16■□□□□ 0.98
HOXA9-202ENST00000396345 K7ERI5 159 aa21.16■□□□□ 0.98
HOXA9-202ENST00000396345 TSPAN1O60635 241 aa21.16■□□□□ 0.98
HOXA9-202ENST00000396345 GADD45BO75293 160 aaPredicted RBP21.16■□□□□ 0.98
HOXA9-202ENST00000396345 ZNF202O95125 648 aa21.16■□□□□ 0.98
HOXA9-202ENST00000396345 PRKCBP05771 671 aa21.16■□□□□ 0.98
HOXA9-202ENST00000396345 IDEP14735 1019 aa21.16■□□□□ 0.98
HOXA9-202ENST00000396345 GAP43P17677 238 aa21.16■□□□□ 0.98
HOXA9-202ENST00000396345 LIG1P18858 919 aa21.16■□□□□ 0.98
HOXA9-202ENST00000396345 AXLP30530 894 aa21.16■□□□□ 0.98
HOXA9-202ENST00000396345 MAPK6Q16659 721 aa21.16■□□□□ 0.98
HOXA9-202ENST00000396345 FAM187BQ17R55 369 aa21.16■□□□□ 0.98
HOXA9-202ENST00000396345 LRIT3Q3SXY7 679 aa21.16■□□□□ 0.98
HOXA9-202ENST00000396345 PPP4R3CPQ6ZMV5 832 aa21.16■□□□□ 0.98
HOXA9-202ENST00000396345 PAGE5Q96GU1 130 aa21.16■□□□□ 0.98
HOXA9-202ENST00000396345 PRIMPOLQ96LW4 560 aa21.16■□□□□ 0.98
HOXA9-202ENST00000396345 TMEM134Q9H6X4 195 aa21.16■□□□□ 0.98
HOXA9-202ENST00000396345 DACT1Q9NYF0 836 aa21.16■□□□□ 0.98
HOXA9-202ENST00000396345 ARHGAP28Q9P2N2 729 aa21.16■□□□□ 0.98
HOXA9-202ENST00000396345 PTPRSQ13332 1948 aa21.16■□□□□ 0.98
HOXA9-202ENST00000396345 PHLPP2Q6ZVD8 1323 aa21.15■□□□□ 0.98
HOXA9-202ENST00000396345 GRXCR1A8MXD5 290 aa21.15■□□□□ 0.98
HOXA9-202ENST00000396345 H0YCG3 227 aa21.15■□□□□ 0.98
HOXA9-202ENST00000396345 ACKR2O00590 384 aa21.15■□□□□ 0.98
HOXA9-202ENST00000396345 TRAK2O60296 914 aa21.15■□□□□ 0.98
HOXA9-202ENST00000396345 IBSPP21815 317 aaPredicted RBP21.15■□□□□ 0.98
HOXA9-202ENST00000396345 HOXA11P31270 313 aaPredicted RBP21.15■□□□□ 0.98
HOXA9-202ENST00000396345 NCKAP1LP55160 1127 aa21.15■□□□□ 0.98
HOXA9-202ENST00000396345 ASIC1P78348 528 aa21.15■□□□□ 0.98
HOXA9-202ENST00000396345 TWF2Q6IBS0 349 aaKnown RBP21.15■□□□□ 0.98
HOXA9-202ENST00000396345 FAM109BQ6ICB4 259 aaPredicted RBP21.15■□□□□ 0.98
HOXA9-202ENST00000396345 CNNM4Q6P4Q7 775 aa21.15■□□□□ 0.98
HOXA9-202ENST00000396345 KRBA2Q6ZNG9 492 aa21.15■□□□□ 0.98
HOXA9-202ENST00000396345 SLC24A5Q71RS6 500 aa21.15■□□□□ 0.98
HOXA9-202ENST00000396345 TMCO2Q7Z6W1 182 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms