RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 ZNF341Q9BYN7 854 aa13.34□□□□□ -0.27
RFC5-201ENST00000392542 PCIF1Q9H4Z3 704 aa13.34□□□□□ -0.27
RFC5-201ENST00000392542 ZNF277Q9NRM2 450 aaPredicted RBP13.34□□□□□ -0.27
RFC5-201ENST00000392542 FEZ2Q9UHY8 353 aaPredicted RBP13.34□□□□□ -0.27
RFC5-201ENST00000392542 LRRN2O75325 713 aa13.33□□□□□ -0.27
RFC5-201ENST00000392542 LYPLA2O95372 231 aa13.33□□□□□ -0.27
RFC5-201ENST00000392542 QARSP47897 775 aaKnown RBP13.33□□□□□ -0.27
RFC5-201ENST00000392542 VAMP7P51809 220 aa13.33□□□□□ -0.27
RFC5-201ENST00000392542 CETN1Q12798 172 aa13.33□□□□□ -0.27
RFC5-201ENST00000392542 PCNX4Q63HM2 1172 aa13.33□□□□□ -0.27
RFC5-201ENST00000392542 LRIG3Q6UXM1 1119 aa13.33□□□□□ -0.27
RFC5-201ENST00000392542 PRPF38AQ8NAV1 312 aaKnown RBP13.33□□□□□ -0.27
RFC5-201ENST00000392542 CCDC26Q8TAB7 109 aa13.33□□□□□ -0.27
RFC5-201ENST00000392542 SEPT11Q9NVA2 429 aaKnown RBP13.33□□□□□ -0.27
RFC5-201ENST00000392542 TAS2R14Q9NYV8 317 aa13.33□□□□□ -0.27
RFC5-201ENST00000392542 PPP1R9AQ9ULJ8 1098 aa13.33□□□□□ -0.27
RFC5-201ENST00000392542 PLAAQ9Y263 795 aa13.33□□□□□ -0.27
RFC5-201ENST00000392542 TISP43B9A030 160 aa13.33□□□□□ -0.28
RFC5-201ENST00000392542 WDR46O15213 610 aaKnown RBP13.33□□□□□ -0.28
RFC5-201ENST00000392542 MRPS9P82933 396 aaKnown RBP13.33□□□□□ -0.28
RFC5-201ENST00000392542 PPP3CAQ08209 521 aa13.33□□□□□ -0.28
RFC5-201ENST00000392542 EPC2Q52LR7 807 aa13.33□□□□□ -0.28
RFC5-201ENST00000392542 DNAJC21Q5F1R6 531 aaKnown RBP13.33□□□□□ -0.28
RFC5-201ENST00000392542 KCTD16Q68DU8 428 aa13.33□□□□□ -0.28
RFC5-201ENST00000392542 ZNF772Q68DY9 489 aaPredicted RBP13.33□□□□□ -0.28
RFC5-201ENST00000392542 KDM7AQ6ZMT4 941 aa13.33□□□□□ -0.28
RFC5-201ENST00000392542 MAATS1Q7Z4T9 603 aa13.33□□□□□ -0.28
RFC5-201ENST00000392542 DDX42Q86XP3 938 aaKnown RBP eCLIP13.33□□□□□ -0.28
RFC5-201ENST00000392542 PALB2Q86YC2 1186 aa13.33□□□□□ -0.28
RFC5-201ENST00000392542 ARHGEF19Q8IW93 802 aa13.33□□□□□ -0.28
RFC5-201ENST00000392542 AGBL3Q8NEM8 1001 aa13.33□□□□□ -0.28
RFC5-201ENST00000392542 LRRC45Q96CN5 670 aa13.33□□□□□ -0.28
RFC5-201ENST00000392542 CBWD1Q9BRT8 395 aa13.33□□□□□ -0.28
RFC5-201ENST00000392542 THAP2Q9H0W7 228 aa13.33□□□□□ -0.28
RFC5-201ENST00000392542 UBE2TQ9NPD8 197 aaPredicted RBP13.33□□□□□ -0.28
RFC5-201ENST00000392542 AMACRQ9UHK6 382 aa13.33□□□□□ -0.28
RFC5-201ENST00000392542 SAMM50Q9Y512 469 aa13.33□□□□□ -0.28
RFC5-201ENST00000392542 XXYLT1Q8NBI6 393 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 PROCA1Q8NCQ7 364 aaPredicted RBP13.32□□□□□ -0.28
RFC5-201ENST00000392542 SYTL5Q8TDW5 730 aaPredicted RBP13.32□□□□□ -0.28
RFC5-201ENST00000392542 ZBED3Q96IU2 234 aaPredicted RBP13.32□□□□□ -0.28
RFC5-201ENST00000392542 CARD9Q9H257 536 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 NEUROG2Q9H2A3 272 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 ST6GALNAC4Q9H4F1 302 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 HSPBP1Q9NZL4 362 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 MAPK13O15264 365 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 FGGP02679 453 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 ALAS1P13196 640 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 HSD17B3P37058 310 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 HADHBP55084 474 aaKnown RBP13.32□□□□□ -0.28
RFC5-201ENST00000392542 SNRPFP62306 86 aaKnown RBP13.32□□□□□ -0.28
RFC5-201ENST00000392542 GTF2BQ00403 316 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 MTMR1Q13613 665 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 C1orf220Q5T0J3 134 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 EMC10Q5UCC4 262 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 DCAF12L1Q5VU92 463 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 RHOT2Q8IXI1 618 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 SLC20A1Q8WUM9 679 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 SEC14L1Q92503 715 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 ATP6V1G3Q96LB4 118 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 TIPINQ9BVW5 301 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 TBC1D22BQ9NU19 505 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 STK32BQ9NY57 414 aa13.32□□□□□ -0.28
RFC5-201ENST00000392542 HMGB1P1B2RPK0 211 aaPredicted RBP13.31□□□□□ -0.28
RFC5-201ENST00000392542 TRIM66O15016 1216 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 TTI1O43156 1089 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 YWHABP31946 246 aaKnown RBP13.31□□□□□ -0.28
RFC5-201ENST00000392542 GCLMP48507 274 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 POU5F1Q01860 360 aaKnown RBP13.31□□□□□ -0.28
RFC5-201ENST00000392542 SPP2Q13103 211 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 UAP1Q16222 522 aaPredicted RBP13.31□□□□□ -0.28
RFC5-201ENST00000392542 HAUS6Q7Z4H7 955 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 C10orf67Q8IYJ2 551 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 CPXCR1Q8N123 301 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 PLEKHO2Q8TD55 490 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 BCAS4Q8TDM0 211 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 LPAR1Q92633 364 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 MAP3K20Q9NYL2 800 aaKnown RBP13.31□□□□□ -0.28
RFC5-201ENST00000392542 ZNRF3Q9ULT6 936 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 COG5Q9UP83 839 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 DAPK3O43293 454 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 NR1D1P20393 614 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 NCKAP1LP55160 1127 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 PDCLQ13371 301 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 TCEAL1Q15170 157 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 CEP85LQ5SZL2 805 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 TTC19Q6DKK2 380 aaPredicted RBP13.31□□□□□ -0.28
RFC5-201ENST00000392542 RNPC3Q96LT9 517 aaKnown RBP13.31□□□□□ -0.28
RFC5-201ENST00000392542 IWS1Q96ST2 819 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 NAP1L3Q99457 506 aaPredicted RBP13.31□□□□□ -0.28
RFC5-201ENST00000392542 VPS33BQ9H267 617 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 SLC38A10Q9HBR0 1119 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 TMBIM4Q9HC24 238 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 RAVER2Q9HCJ3 691 aaKnown RBP13.31□□□□□ -0.28
RFC5-201ENST00000392542 FAM114A2Q9NRY5 505 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 BCS1LQ9Y276 419 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 FER1L6Q2WGJ9 1857 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 PFASO15067 1338 aa13.31□□□□□ -0.28
RFC5-201ENST00000392542 ASTN2O75129 1339 aaPredicted RBP13.31□□□□□ -0.28
RFC5-201ENST00000392542 PHF20L1A8MW92 1017 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms