RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 EMSYQ7Z589 1322 aa23.31■■□□□ 1.32
SPHK1-202ENST00000392496 ADGRA3Q8IWK6 1321 aa23.31■■□□□ 1.32
SPHK1-202ENST00000392496 IPO7O95373 1038 aaKnown RBP23.3■■□□□ 1.32
SPHK1-202ENST00000392496 MCCD1P59942 119 aaPredicted RBP23.3■■□□□ 1.32
SPHK1-202ENST00000392496 C1QTNF8P60827 252 aa23.3■■□□□ 1.32
SPHK1-202ENST00000392496 GCNT4Q9P109 453 aa23.3■■□□□ 1.32
SPHK1-202ENST00000392496 MYO6Q9UM54 1294 aa23.3■■□□□ 1.32
SPHK1-202ENST00000392496 A0A0U1RQJ8 604 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 SSU72P8A0A1W2PR75 194 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 KIF5CO60282 957 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 CNGA1P29973 690 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 ARHGAP25P42331 645 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 MAPK8IP2Q13387 824 aaPredicted RBP23.29■■□□□ 1.32
SPHK1-202ENST00000392496 DEFB115Q30KQ5 88 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 GPR142Q7Z601 462 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 ATRIPQ8WXE1 791 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 PDGFCQ9NRA1 345 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 RBM47A0AV96 593 aaKnown RBP23.29■■□□□ 1.32
SPHK1-202ENST00000392496 ANKRD63C9JTQ0 380 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 MAFO75444 373 aaPredicted RBP23.29■■□□□ 1.32
SPHK1-202ENST00000392496 ACTN1P12814 892 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 UCHL3P15374 230 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 MAPK4P31152 587 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 NAMPTP43490 491 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 SLC26A2P50443 739 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 GRB14Q14449 540 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 BRDTQ58F21 947 aaPredicted RBP23.29■■□□□ 1.32
SPHK1-202ENST00000392496 RDH13Q8NBN7 331 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 GLG1Q92896 1179 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 HAUS4Q9H6D7 363 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 L2HGDHQ9H9P8 463 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 SIX2Q9NPC8 291 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 AIPL1Q9NZN9 384 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 MYO1AQ9UBC5 1043 aa23.29■■□□□ 1.32
SPHK1-202ENST00000392496 LCA5LO95447 670 aa23.28■■□□□ 1.32
SPHK1-202ENST00000392496 SERPING1P05155 500 aa23.28■■□□□ 1.32
SPHK1-202ENST00000392496 ADSSP30520 456 aa23.28■■□□□ 1.32
SPHK1-202ENST00000392496 CASQ1P31415 396 aa23.28■■□□□ 1.32
SPHK1-202ENST00000392496 EIF4A3P38919 411 aaKnown RBP23.28■■□□□ 1.32
SPHK1-202ENST00000392496 APBA1Q02410 837 aa23.28■■□□□ 1.32
SPHK1-202ENST00000392496 SLC9C1Q4G0N8 1177 aa23.28■■□□□ 1.32
SPHK1-202ENST00000392496 HGSNATQ68CP4 663 aa23.28■■□□□ 1.32
SPHK1-202ENST00000392496 TAPT1Q6NXT6 567 aa23.28■■□□□ 1.32
SPHK1-202ENST00000392496 MAMDC4Q6UXC1 1216 aa23.28■■□□□ 1.32
SPHK1-202ENST00000392496 PLEKHH3Q7Z736 793 aa23.28■■□□□ 1.32
SPHK1-202ENST00000392496 EXOC8Q8IYI6 725 aa23.28■■□□□ 1.32
SPHK1-202ENST00000392496 ATP8B4Q8TF62 1192 aa23.28■■□□□ 1.32
SPHK1-202ENST00000392496 COPS5Q92905 334 aa23.28■■□□□ 1.32
SPHK1-202ENST00000392496 TMEM143Q96AN5 459 aa23.28■■□□□ 1.32
SPHK1-202ENST00000392496 DAAM1Q9Y4D1 1078 aa23.28■■□□□ 1.32
SPHK1-202ENST00000392496 PLEKP08567 350 aaPredicted RBP23.27■■□□□ 1.32
SPHK1-202ENST00000392496 TRIM49P0CI25 452 aa23.27■■□□□ 1.32
SPHK1-202ENST00000392496 TRIM49CP0CI26 452 aa23.27■■□□□ 1.32
SPHK1-202ENST00000392496 GLRA2P23416 452 aa23.27■■□□□ 1.32
SPHK1-202ENST00000392496 VAMP7P51809 220 aa23.27■■□□□ 1.32
SPHK1-202ENST00000392496 TAS1R3Q7RTX0 852 aa23.27■■□□□ 1.32
SPHK1-202ENST00000392496 RASAL3Q86YV0 1011 aa23.27■■□□□ 1.32
SPHK1-202ENST00000392496 ASAP3Q8TDY4 903 aa23.27■■□□□ 1.32
SPHK1-202ENST00000392496 WDR24Q96S15 920 aa23.27■■□□□ 1.32
SPHK1-202ENST00000392496 SMARCAD1Q9H4L7 1026 aa23.27■■□□□ 1.32
SPHK1-202ENST00000392496 ZCCHC17Q9NP64 241 aaKnown RBP23.27■■□□□ 1.32
SPHK1-202ENST00000392496 SIP14410 1827 aa23.27■■□□□ 1.32
SPHK1-202ENST00000392496 FANCGO15287 622 aa23.27■■□□□ 1.32
SPHK1-202ENST00000392496 P4HA2O15460 535 aa23.27■■□□□ 1.32
SPHK1-202ENST00000392496 TLR2O60603 784 aa23.27■■□□□ 1.32
SPHK1-202ENST00000392496 N4BP1O75113 896 aaKnown RBP23.27■■□□□ 1.32
SPHK1-202ENST00000392496 GARTP22102 1010 aa23.27■■□□□ 1.32
SPHK1-202ENST00000392496 KIF11P52732 1056 aa23.27■■□□□ 1.32
SPHK1-202ENST00000392496 LAMC2Q13753 1193 aa23.27■■□□□ 1.32
SPHK1-202ENST00000392496 SPA17Q15506 151 aa23.27■■□□□ 1.32
SPHK1-202ENST00000392496 SLC39A4Q6P5W5 647 aa23.27■■□□□ 1.32
SPHK1-202ENST00000392496 DEF6Q9H4E7 631 aa23.27■■□□□ 1.32
SPHK1-202ENST00000392496 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.27■■□□□ 1.32
SPHK1-202ENST00000392496 ZNF236Q9UL36 1845 aa23.27■■□□□ 1.31
SPHK1-202ENST00000392496 MANSC4A6NHS7 340 aaPredicted RBP23.26■■□□□ 1.31
SPHK1-202ENST00000392496 DYNC1I1O14576 645 aa23.26■■□□□ 1.31
SPHK1-202ENST00000392496 GAS2O43903 313 aaKnown RBP23.26■■□□□ 1.31
SPHK1-202ENST00000392496 MYL7Q01449 175 aa23.26■■□□□ 1.31
SPHK1-202ENST00000392496 RAPGEF1Q13905 1077 aa23.26■■□□□ 1.31
SPHK1-202ENST00000392496 PLCB4Q15147 1175 aa23.26■■□□□ 1.31
SPHK1-202ENST00000392496 ASTE1Q2TB18 679 aaPredicted RBP23.26■■□□□ 1.31
SPHK1-202ENST00000392496 CBWD6Q4V339 395 aa23.26■■□□□ 1.31
SPHK1-202ENST00000392496 CBWD3Q5JTY5 395 aa23.26■■□□□ 1.31
SPHK1-202ENST00000392496 CBWD5Q5RIA9 395 aa23.26■■□□□ 1.31
SPHK1-202ENST00000392496 KIAA1328Q86T90 577 aa23.26■■□□□ 1.31
SPHK1-202ENST00000392496 DPP9Q86TI2 863 aa23.26■■□□□ 1.31
SPHK1-202ENST00000392496 FBXL18Q96ME1 805 aa23.26■■□□□ 1.31
SPHK1-202ENST00000392496 KATNBL1Q9H079 304 aa23.26■■□□□ 1.31
SPHK1-202ENST00000392496 FHOD1Q9Y613 1164 aa23.26■■□□□ 1.31
SPHK1-202ENST00000392496 AKR1B10O60218 316 aa23.25■■□□□ 1.31
SPHK1-202ENST00000392496 GH1P01241 217 aa23.25■■□□□ 1.31
SPHK1-202ENST00000392496 HSPA6P17066 643 aa23.25■■□□□ 1.31
SPHK1-202ENST00000392496 ARHGAP1Q07960 439 aa23.25■■□□□ 1.31
SPHK1-202ENST00000392496 ASIC2Q16515 512 aa23.25■■□□□ 1.31
SPHK1-202ENST00000392496 DEPTORQ8TB45 409 aa23.25■■□□□ 1.31
SPHK1-202ENST00000392496 SPAG5Q96R06 1193 aa23.25■■□□□ 1.31
SPHK1-202ENST00000392496 IRX2Q9BZI1 471 aaPredicted RBP23.25■■□□□ 1.31
SPHK1-202ENST00000392496 ADGRA2Q96PE1 1338 aa23.25■■□□□ 1.31
SPHK1-202ENST00000392496 SLC15A5A6NIM6 579 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 HNRNPDLO14979 420 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms