RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 IQCA1LA6NCM1 817 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 UNC119BA6NIH7 251 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 LEFTY2O00292 366 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 HOXA3O43365 443 aaPredicted RBP2.56□□□□□ -2
RNU6-239P-201ENST00000390990 C1QL1O75973 258 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 PDIA4P13667 645 aaKnown RBP2.56□□□□□ -2
RNU6-239P-201ENST00000390990 HNRNPLP14866 589 aaKnown RBP eCLIP2.56□□□□□ -2
RNU6-239P-201ENST00000390990 SDHAP31040 664 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 MPLP40238 635 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 DGKDQ16760 1214 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 BEAN1Q3B7T3 259 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 LCE1EQ5T753 118 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 BRAPQ7Z569 592 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 GRASPQ7Z6J2 395 aaPredicted RBP2.56□□□□□ -2
RNU6-239P-201ENST00000390990 CISD2Q8N5K1 135 aaKnown RBP2.56□□□□□ -2
RNU6-239P-201ENST00000390990 OR52N2Q8NGI0 321 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 SLC7A14Q8TBB6 771 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 ZNF384Q8TF68 577 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 PTPRN2Q92932 1015 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 WDR92Q96MX6 357 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 FOXB1Q99853 325 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 CPPED1Q9BRF8 314 aaPredicted RBP2.56□□□□□ -2
RNU6-239P-201ENST00000390990 NDC1Q9BTX1 674 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 TEX101Q9BY14 249 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 HAPLN2Q9GZV7 340 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 DNAI1Q9UI46 699 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 TLK1Q9UKI8 766 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 CHST2Q9Y4C5 530 aa2.56□□□□□ -2
RNU6-239P-201ENST00000390990 LRRC3CA6NJW4 275 aa2.55□□□□□ -2
RNU6-239P-201ENST00000390990 CGB1A6NKQ9 187 aa2.55□□□□□ -2
RNU6-239P-201ENST00000390990 RNASET2O00584 256 aaKnown RBP2.55□□□□□ -2
RNU6-239P-201ENST00000390990 GSTA4O15217 222 aa2.55□□□□□ -2
RNU6-239P-201ENST00000390990 ESRRBO95718 433 aa2.55□□□□□ -2
RNU6-239P-201ENST00000390990 C6orf222P0C671 652 aaPredicted RBP2.55□□□□□ -2
RNU6-239P-201ENST00000390990 VAMP1P23763 118 aa2.55□□□□□ -2
RNU6-239P-201ENST00000390990 KIR2DL3P43628 341 aa2.55□□□□□ -2
RNU6-239P-201ENST00000390990 SLC6A3Q01959 620 aa2.55□□□□□ -2
RNU6-239P-201ENST00000390990 VPS72Q15906 364 aa2.55□□□□□ -2
RNU6-239P-201ENST00000390990 FAM47CQ5HY64 1035 aa2.55□□□□□ -2
RNU6-239P-201ENST00000390990 GDF7Q7Z4P5 450 aa2.55□□□□□ -2
RNU6-239P-201ENST00000390990 ASB10Q8WXI3 467 aa2.55□□□□□ -2
RNU6-239P-201ENST00000390990 DYDC2Q96IM9 177 aa2.55□□□□□ -2
RNU6-239P-201ENST00000390990 LSM14BQ9BX40 385 aaKnown RBP2.55□□□□□ -2
RNU6-239P-201ENST00000390990 TGIF2Q9GZN2 237 aa2.55□□□□□ -2
RNU6-239P-201ENST00000390990 ENKD1Q9H0I2 346 aa2.55□□□□□ -2
RNU6-239P-201ENST00000390990 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.55□□□□□ -2
RNU6-239P-201ENST00000390990 CRTAMO95727 393 aa2.54□□□□□ -2
RNU6-239P-201ENST00000390990 PRLP01236 227 aa2.54□□□□□ -2
RNU6-239P-201ENST00000390990 HOXB6P17509 224 aaKnown RBP2.54□□□□□ -2
RNU6-239P-201ENST00000390990 BMPR1AP36894 532 aa2.54□□□□□ -2
RNU6-239P-201ENST00000390990 GUCY1B3Q02153 619 aa2.54□□□□□ -2
RNU6-239P-201ENST00000390990 TP53BP2Q13625 1128 aa2.54□□□□□ -2
RNU6-239P-201ENST00000390990 DDR2Q16832 855 aa2.54□□□□□ -2
RNU6-239P-201ENST00000390990 METTL24Q5JXM2 366 aa2.54□□□□□ -2
RNU6-239P-201ENST00000390990 IQSEC1Q6DN90 963 aa2.54□□□□□ -2
RNU6-239P-201ENST00000390990 SH2D3CQ8N5H7 860 aa2.54□□□□□ -2
RNU6-239P-201ENST00000390990 CPEB3Q8NE35 698 aaKnown RBP2.54□□□□□ -2
RNU6-239P-201ENST00000390990 CAGE1Q8TC20 777 aa2.54□□□□□ -2
RNU6-239P-201ENST00000390990 HNRNPLLQ8WVV9 542 aaKnown RBP2.54□□□□□ -2
RNU6-239P-201ENST00000390990 ADAM2Q99965 735 aa2.54□□□□□ -2
RNU6-239P-201ENST00000390990 C14orf93Q9H972 538 aaKnown RBP2.54□□□□□ -2
RNU6-239P-201ENST00000390990 ZNF408Q9H9D4 720 aa2.54□□□□□ -2
RNU6-239P-201ENST00000390990 SEMA4GQ9NTN9 838 aa2.54□□□□□ -2
RNU6-239P-201ENST00000390990 KCMF1Q9P0J7 381 aa2.54□□□□□ -2
RNU6-239P-201ENST00000390990 GAGE12BA1L429 117 aa2.53□□□□□ -2
RNU6-239P-201ENST00000390990 GAGE12HA6NDE8 117 aa2.53□□□□□ -2
RNU6-239P-201ENST00000390990 MGST3O14880 152 aa2.53□□□□□ -2
RNU6-239P-201ENST00000390990 DAPK3O43293 454 aa2.53□□□□□ -2
RNU6-239P-201ENST00000390990 DNAJC6O75061 913 aa2.53□□□□□ -2
RNU6-239P-201ENST00000390990 ZFPL1O95159 310 aa2.53□□□□□ -2
RNU6-239P-201ENST00000390990 EGR2P11161 476 aaPredicted RBP2.53□□□□□ -2
RNU6-239P-201ENST00000390990 ZSCAN20P17040 1043 aaPredicted RBP2.53□□□□□ -2
RNU6-239P-201ENST00000390990 RNASE9P60153 205 aaKnown RBP2.53□□□□□ -2
RNU6-239P-201ENST00000390990 ZNF425Q6IV72 752 aa2.53□□□□□ -2
RNU6-239P-201ENST00000390990 ARHGEF25Q86VW2 580 aa2.53□□□□□ -2
RNU6-239P-201ENST00000390990 SYT12Q8IV01 421 aa2.53□□□□□ -2
RNU6-239P-201ENST00000390990 SLC44A3Q8N4M1 653 aa2.53□□□□□ -2
RNU6-239P-201ENST00000390990 DCLRE1CQ96SD1 692 aaKnown RBP2.53□□□□□ -2
RNU6-239P-201ENST00000390990 PDCD2LQ9BRP1 358 aa2.53□□□□□ -2
RNU6-239P-201ENST00000390990 DUSP26Q9BV47 211 aa2.53□□□□□ -2
RNU6-239P-201ENST00000390990 KIAA1586Q9HCI6 787 aa2.53□□□□□ -2
RNU6-239P-201ENST00000390990 POLR3BQ9NW08 1133 aaPredicted RBP2.53□□□□□ -2
RNU6-239P-201ENST00000390990 ING3Q9NXR8 418 aa2.53□□□□□ -2
RNU6-239P-201ENST00000390990 COQ6Q9Y2Z9 468 aa2.53□□□□□ -2
RNU6-239P-201ENST00000390990 SLC12A8A0AV02 714 aa2.52□□□□□ -2.01
RNU6-239P-201ENST00000390990 WDR91A4D1P6 747 aa2.52□□□□□ -2.01
RNU6-239P-201ENST00000390990 MTSS1O43312 755 aa2.52□□□□□ -2.01
RNU6-239P-201ENST00000390990 KCNAB3O43448 404 aa2.52□□□□□ -2.01
RNU6-239P-201ENST00000390990 SPDEFO95238 335 aa2.52□□□□□ -2.01
RNU6-239P-201ENST00000390990 DDX6P26196 483 aaKnown RBP eCLIP2.52□□□□□ -2.01
RNU6-239P-201ENST00000390990 SIM1P81133 766 aaPredicted RBP2.52□□□□□ -2.01
RNU6-239P-201ENST00000390990 ROM1Q03395 351 aa2.52□□□□□ -2.01
RNU6-239P-201ENST00000390990 SRSF4Q08170 494 aaKnown RBP2.52□□□□□ -2.01
RNU6-239P-201ENST00000390990 MPP3Q13368 585 aa2.52□□□□□ -2.01
RNU6-239P-201ENST00000390990 PDCD4Q53EL6 469 aaKnown RBP2.52□□□□□ -2.01
RNU6-239P-201ENST00000390990 FAM209AQ5JX71 171 aa2.52□□□□□ -2.01
RNU6-239P-201ENST00000390990 ABHD17BQ5VST6 288 aa2.52□□□□□ -2.01
RNU6-239P-201ENST00000390990 FOXB2Q5VYV0 432 aa2.52□□□□□ -2.01
RNU6-239P-201ENST00000390990 SLFN12LQ6IEE8 588 aa2.52□□□□□ -2.01
RNU6-239P-201ENST00000390990 OVCH1Q7RTY7 1134 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms