RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 KCTD6Q8NC69 237 aa13.92□□□□□ -0.18
PTPRN2-203ENST00000389418 NOL3O60936 208 aaKnown RBP13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 UPP2O95045 317 aa13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 SLC25A27O95847 323 aa13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 NPEPPSP55786 919 aa13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 GRIN1Q05586 938 aa13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 TFDP2Q14188 446 aa13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 TTC13Q8NBP0 860 aa13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 LRRC53A6NM62 1247 aa13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 PPP6R3Q5H9R7 873 aaPredicted RBP13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 CAPS2Q9BXY5 557 aa13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 TMEM60Q9H2L4 133 aa13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 LRRD1A4D1F6 860 aa13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 PIK3R2O00459 728 aa13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 ZNF189O75820 626 aaPredicted RBP13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 CLCN6P51797 869 aa13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 PDE1BQ01064 536 aa13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 KRT39Q6A163 491 aa13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 TRIM72Q6ZMU5 477 aa13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 POLR3FQ9H1D9 316 aaPredicted RBP13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 SIGLEC1Q9BZZ2 1709 aa13.91□□□□□ -0.18
PTPRN2-203ENST00000389418 SNAPC2Q13487 334 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 ZNF699Q32M78 642 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 XKR3Q5GH77 459 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 TMEM270Q6UE05 265 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 ARHGEF18Q6ZSZ5 1173 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 DPF2Q92785 391 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 RBM41Q96IZ5 413 aaKnown RBP13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 JPH1Q9HDC5 661 aaPredicted RBP13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 ATP8A1Q9Y2Q0 1164 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 NOC2LQ9Y3T9 749 aaKnown RBP13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 DGAT1O75907 488 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 PGK2P07205 417 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 RARBP10826 455 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 GPC3P51654 580 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 LRRC71Q8N4P6 559 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 VCX3BQ9H321 246 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 ADAM22Q9P0K1 906 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 USP27XA6NNY8 438 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 F5H423 210 aaPredicted RBP13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 PDXKO00764 312 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 CTNND1O60716 968 aaKnown RBP13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 SLC7A5Q01650 507 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 TTC19Q6DKK2 380 aaPredicted RBP13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 CYP4F22Q6NT55 531 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 CFAP57Q96MR6 1250 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 TRIM9Q9C026 710 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 JMJD4Q9H9V9 463 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 MYO5BQ9ULV0 1848 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 KIF13AQ9H1H9 1805 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 ESYT2A0FGR8 921 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 STAT5BP51692 787 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 VAMP7P51809 220 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 TSPY1Q01534 308 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 IQCB1Q15051 598 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 FBXO38Q6PIJ6 1188 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 GLYCTKQ8IVS8 523 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 TEX2Q8IWB9 1127 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 SKA2Q8WVK7 121 aaPredicted RBP13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 PARK7Q99497 189 aaKnown RBP13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 TRIM62Q9BVG3 475 aa13.9□□□□□ -0.18
PTPRN2-203ENST00000389418 A0A1W2PQC6 194 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 ANO9A1A5B4 782 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 CPP00450 1065 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 ACOT2P49753 483 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 RNF10Q8N5U6 811 aaKnown RBP13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 URGCPQ8TCY9 931 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 MORC4Q8TE76 937 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 MTFR1LQ9H019 292 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 LRRC4BQ9NT99 713 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 WHAMMQ8TF30 809 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 PRPF31Q8WWY3 499 aaKnown RBP13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 AP1M1Q9BXS5 423 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 MID2Q9UJV3 735 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 HPS5Q9UPZ3 1129 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 PFASO15067 1338 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 TJP3O95049 919 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 ACTN1P12814 892 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 RPS6P62753 249 aaKnown RBP13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 IRX4P78413 519 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 GLE1Q53GS7 698 aaKnown RBP13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 DARS2Q6PI48 645 aaKnown RBP13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 FRMD5Q7Z6J6 570 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 ARHGEF2Q92974 986 aaKnown RBP13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 RSRC1Q96IZ7 334 aaKnown RBP13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 ZWILCHQ9H900 591 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 MAP2P11137 1827 aaKnown RBP13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 PODXLO00592 558 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 HIP1RO75146 1068 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 GTF2A1P52655 376 aaPredicted RBP13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 GPC5P78333 572 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 IL9RQ01113 521 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 CACNB2Q08289 660 aaPredicted RBP13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 KCNH4Q9UQ05 1017 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 ADGRG1Q9Y653 693 aa13.89□□□□□ -0.19
PTPRN2-203ENST00000389418 SYNGAP1Q96PV0 1343 aa13.88□□□□□ -0.19
PTPRN2-203ENST00000389418 POC1B-GALNT4F8VUJ3 575 aa13.88□□□□□ -0.19
PTPRN2-203ENST00000389418 SRGAP2O75044 1071 aa13.88□□□□□ -0.19
PTPRN2-203ENST00000389418 IFNAR2P48551 515 aa13.88□□□□□ -0.19
PTPRN2-203ENST00000389418 NDUFAF2Q8N183 169 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms