RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 SKIP12755 728 aa10.9□□□□□ -0.66
IFT88-203ENST00000389373 KCNA4P22459 653 aa10.9□□□□□ -0.66
IFT88-203ENST00000389373 SNW1Q13573 536 aaKnown RBP10.9□□□□□ -0.66
IFT88-203ENST00000389373 UBXN2BQ14CS0 331 aa10.9□□□□□ -0.66
IFT88-203ENST00000389373 JAKMIP3Q5VZ66 844 aa10.9□□□□□ -0.66
IFT88-203ENST00000389373 DIEXFQ68CQ4 756 aaKnown RBP10.9□□□□□ -0.66
IFT88-203ENST00000389373 ELMSAN1Q6PJG2 1045 aa10.9□□□□□ -0.66
IFT88-203ENST00000389373 MAML2Q8IZL2 1156 aaPredicted RBP10.9□□□□□ -0.66
IFT88-203ENST00000389373 GPR161Q8N6U8 529 aaKnown RBP10.9□□□□□ -0.66
IFT88-203ENST00000389373 CMASQ8NFW8 434 aaPredicted RBP10.9□□□□□ -0.66
IFT88-203ENST00000389373 URGCPQ8TCY9 931 aa10.9□□□□□ -0.66
IFT88-203ENST00000389373 RUFY2Q8WXA3 655 aa10.9□□□□□ -0.66
IFT88-203ENST00000389373 SHDQ96IW2 340 aa10.9□□□□□ -0.66
IFT88-203ENST00000389373 BCO2Q9BYV7 579 aa10.9□□□□□ -0.66
IFT88-203ENST00000389373 RWDD1Q9H446 243 aaPredicted RBP10.9□□□□□ -0.66
IFT88-203ENST00000389373 CHST12Q9NRB3 414 aa10.9□□□□□ -0.66
IFT88-203ENST00000389373 PIN4Q9Y237 131 aaKnown RBP10.9□□□□□ -0.66
IFT88-203ENST00000389373 PCDHA10Q9Y5I2 948 aa10.9□□□□□ -0.66
IFT88-203ENST00000389373 SLC12A7Q9Y666 1083 aa10.9□□□□□ -0.66
IFT88-203ENST00000389373 GVINP1Q7Z2Y8 2422 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 DMDP11532 3685 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 A0A087WZ62 844 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 PRR5-ARHGAP8B1AHC4 643 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 SH2B2O14492 632 aaPredicted RBP10.89□□□□□ -0.67
IFT88-203ENST00000389373 B4GALT3O60512 393 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 LILRB3O75022 631 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 DDHD2O94830 711 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 GLUD1P00367 558 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 ADH1AP07327 375 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 LAMP2P13473 410 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 SREBF1P36956 1147 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 GPC5P78333 572 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 ARHGAP8P85298 464 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 NUCB1Q02818 461 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 TYW1BQ6NUM6 668 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 ZNF746Q6NUN9 644 aaPredicted RBP10.89□□□□□ -0.67
IFT88-203ENST00000389373 TMTC3Q6ZXV5 915 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 NIPA1Q7RTP0 329 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 TAS1R1Q7RTX1 841 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 MICU3Q86XE3 530 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 PALB2Q86YC2 1186 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 GLYCTKQ8IVS8 523 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 ZNF710Q8N1W2 664 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 LINC01465Q8N7H1 131 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 FANCBQ8NB91 859 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 PGBD4Q96DM1 585 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 FAM167AQ96KS9 214 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 FDXACB1Q9BRP7 624 aaPredicted RBP10.89□□□□□ -0.67
IFT88-203ENST00000389373 RTKNQ9BST9 563 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 LRRC2Q9BYS8 371 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 TBC1D22BQ9NU19 505 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 FAM105AQ9NUU6 356 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 DPP7Q9UHL4 492 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 PRG3Q9Y2Y8 225 aaPredicted RBP10.89□□□□□ -0.67
IFT88-203ENST00000389373 NUMBLQ9Y6R0 609 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 DENND4AQ7Z401 1863 aa10.89□□□□□ -0.67
IFT88-203ENST00000389373 KANSL1LA0AUZ9 987 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 FAM170BA6NMN3 283 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 NRP1O14786 923 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 SPTLC1O15269 473 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 TEX28O15482 410 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 POMCP01189 267 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 OATP04181 439 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 SFPQP23246 707 aaKnown RBP eCLIP10.88□□□□□ -0.67
IFT88-203ENST00000389373 MCM5P33992 734 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 STARD6P59095 220 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 LMNB2Q03252 620 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 AP3B2Q13367 1082 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 DRP2Q13474 957 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 CYP26C1Q6V0L0 522 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 SYNE3Q6ZMZ3 975 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 CATSPER4Q7RTX7 472 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 SMC5Q8IY18 1101 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 SMAP1Q8IYB5 467 aaPredicted RBP10.88□□□□□ -0.67
IFT88-203ENST00000389373 PHKBQ93100 1093 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 TMEM87BQ96K49 555 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 RPS6KC1Q96S38 1066 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 RPP25Q9BUL9 199 aaKnown RBP10.88□□□□□ -0.67
IFT88-203ENST00000389373 STK39Q9UEW8 545 aa10.88□□□□□ -0.67
IFT88-203ENST00000389373 RALYQ9UKM9 306 aaKnown RBP10.88□□□□□ -0.67
IFT88-203ENST00000389373 SMG5Q9UPR3 1016 aaKnown RBP10.88□□□□□ -0.67
IFT88-203ENST00000389373 MTF2Q9Y483 593 aaPredicted RBP10.88□□□□□ -0.67
IFT88-203ENST00000389373 V9GY48 417 aaPredicted RBP10.88□□□□□ -0.67
IFT88-203ENST00000389373 EP300Q09472 2414 aaPredicted RBP10.88□□□□□ -0.67
IFT88-203ENST00000389373 CACNA1BQ00975 2339 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 DMXL1Q9Y485 3027 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 CHMP2AO43633 222 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 GAS2O43903 313 aaKnown RBP10.87□□□□□ -0.67
IFT88-203ENST00000389373 ZNF862O60290 1169 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 IGHDP01880 384 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 SOD2P04179 222 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 ADRB1P08588 477 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 CD72P21854 359 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 OR1G1P47890 313 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 AFF1P51825 1210 aaKnown RBP10.87□□□□□ -0.67
IFT88-203ENST00000389373 PRKCEQ02156 737 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 HTR4Q13639 388 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 ZNF528Q3MIS6 628 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 MTERF2Q49AM1 385 aa10.87□□□□□ -0.67
IFT88-203ENST00000389373 TSSK4Q6SA08 328 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms