RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 PHKA2P46019 1235 aa25.45■■□□□ 1.66
VLDLR-201ENST00000382096 NONOQ15233 471 aaKnown RBP eCLIP25.45■■□□□ 1.66
VLDLR-201ENST00000382096 KIAA1841Q6NSI8 718 aa25.45■■□□□ 1.66
VLDLR-201ENST00000382096 KRT25Q7Z3Z0 450 aa25.45■■□□□ 1.66
VLDLR-201ENST00000382096 ZDHHC14Q8IZN3 488 aa25.45■■□□□ 1.66
VLDLR-201ENST00000382096 VPS52Q8N1B4 723 aa25.45■■□□□ 1.66
VLDLR-201ENST00000382096 CEP89Q96ST8 783 aa25.45■■□□□ 1.66
VLDLR-201ENST00000382096 PHF20Q9BVI0 1012 aa25.45■■□□□ 1.66
VLDLR-201ENST00000382096 NIFKQ9BYG3 293 aaKnown RBP25.45■■□□□ 1.66
VLDLR-201ENST00000382096 RIF1Q5UIP0 2472 aaKnown RBP25.44■■□□□ 1.66
VLDLR-201ENST00000382096 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.44■■□□□ 1.66
VLDLR-201ENST00000382096 CSDE1O75534 798 aaKnown RBP25.44■■□□□ 1.66
VLDLR-201ENST00000382096 POLGP54098 1239 aaPredicted RBP25.44■■□□□ 1.66
VLDLR-201ENST00000382096 ANAPC15P60006 121 aa25.44■■□□□ 1.66
VLDLR-201ENST00000382096 CDC42EP1Q00587 391 aa25.44■■□□□ 1.66
VLDLR-201ENST00000382096 DRP2Q13474 957 aa25.44■■□□□ 1.66
VLDLR-201ENST00000382096 RARS2Q5T160 578 aaKnown RBP25.44■■□□□ 1.66
VLDLR-201ENST00000382096 MIER3Q7Z3K6 550 aa25.44■■□□□ 1.66
VLDLR-201ENST00000382096 TMEM173Q86WV6 379 aaPredicted RBP25.44■■□□□ 1.66
VLDLR-201ENST00000382096 GCOM2Q9BZD3 368 aaPredicted RBP25.44■■□□□ 1.66
VLDLR-201ENST00000382096 WDR87Q6ZQQ6 2873 aa25.43■■□□□ 1.66
VLDLR-201ENST00000382096 PFKFB2O60825 505 aa25.43■■□□□ 1.66
VLDLR-201ENST00000382096 ZC3H11AO75152 810 aaKnown RBP eCLIP25.43■■□□□ 1.66
VLDLR-201ENST00000382096 WEE2P0C1S8 567 aa25.43■■□□□ 1.66
VLDLR-201ENST00000382096 CA8P35219 290 aa25.43■■□□□ 1.66
VLDLR-201ENST00000382096 GIT2Q14161 759 aa25.43■■□□□ 1.66
VLDLR-201ENST00000382096 XKR3Q5GH77 459 aa25.43■■□□□ 1.66
VLDLR-201ENST00000382096 DDX53Q86TM3 631 aaKnown RBP25.43■■□□□ 1.66
VLDLR-201ENST00000382096 TMEM105Q8N8V8 129 aa25.43■■□□□ 1.66
VLDLR-201ENST00000382096 TDRD5Q8NAT2 981 aaKnown RBP25.43■■□□□ 1.66
VLDLR-201ENST00000382096 SMOC2Q9H3U7 446 aa25.43■■□□□ 1.66
VLDLR-201ENST00000382096 TPCN1Q9ULQ1 816 aa25.43■■□□□ 1.66
VLDLR-201ENST00000382096 KCNJ14Q9UNX9 436 aa25.43■■□□□ 1.66
VLDLR-201ENST00000382096 USTQ9Y2C2 406 aa25.43■■□□□ 1.66
VLDLR-201ENST00000382096 IGKV6-21A0A0C4DH24 114 aa25.42■■□□□ 1.66
VLDLR-201ENST00000382096 CTSAP10619 480 aa25.42■■□□□ 1.66
VLDLR-201ENST00000382096 SFPQP23246 707 aaKnown RBP eCLIP25.42■■□□□ 1.66
VLDLR-201ENST00000382096 INF2Q27J81 1249 aa25.42■■□□□ 1.66
VLDLR-201ENST00000382096 C12orf76Q8N812 135 aaPredicted RBP25.42■■□□□ 1.66
VLDLR-201ENST00000382096 SLC22A17Q8WUG5 538 aa25.42■■□□□ 1.66
VLDLR-201ENST00000382096 AUTS2Q8WXX7 1259 aa25.42■■□□□ 1.66
VLDLR-201ENST00000382096 IGSF21Q96ID5 467 aa25.42■■□□□ 1.66
VLDLR-201ENST00000382096 SLKQ9H2G2 1235 aaPredicted RBP25.42■■□□□ 1.66
VLDLR-201ENST00000382096 DDX25Q9UHL0 483 aaKnown RBP25.42■■□□□ 1.66
VLDLR-201ENST00000382096 FAM186AA6NE01 2351 aa25.42■■□□□ 1.66
VLDLR-201ENST00000382096 PTPRZ1P23471 2315 aaPredicted RBP25.42■■□□□ 1.66
VLDLR-201ENST00000382096 SLC37A4O43826 429 aa25.41■■□□□ 1.66
VLDLR-201ENST00000382096 ASGR2P07307 311 aa25.41■■□□□ 1.66
VLDLR-201ENST00000382096 SKIP12755 728 aa25.41■■□□□ 1.66
VLDLR-201ENST00000382096 EPCAMP16422 314 aa25.41■■□□□ 1.66
VLDLR-201ENST00000382096 ATAT1Q5SQI0 421 aa25.41■■□□□ 1.66
VLDLR-201ENST00000382096 PLCD3Q8N3E9 789 aa25.41■■□□□ 1.66
VLDLR-201ENST00000382096 TBC1D13Q9NVG8 400 aa25.41■■□□□ 1.66
VLDLR-201ENST00000382096 PPP4R2Q9NY27 417 aa25.41■■□□□ 1.66
VLDLR-201ENST00000382096 SEPT9Q9UHD8 586 aaPredicted RBP25.41■■□□□ 1.66
VLDLR-201ENST00000382096 DBR1Q9UK59 544 aaKnown RBP25.41■■□□□ 1.66
VLDLR-201ENST00000382096 A0A087WZ62 844 aa25.4■■□□□ 1.66
VLDLR-201ENST00000382096 DNM2P50570 870 aa25.4■■□□□ 1.66
VLDLR-201ENST00000382096 MTERF2Q49AM1 385 aa25.4■■□□□ 1.66
VLDLR-201ENST00000382096 ASTLQ6HA08 431 aaPredicted RBP25.4■■□□□ 1.66
VLDLR-201ENST00000382096 TWF2Q6IBS0 349 aaKnown RBP25.4■■□□□ 1.66
VLDLR-201ENST00000382096 PPP4R3AQ6IN85 833 aa25.4■■□□□ 1.66
VLDLR-201ENST00000382096 KANK3Q6NY19 840 aa25.4■■□□□ 1.66
VLDLR-201ENST00000382096 GLB1LQ6UWU2 654 aa25.4■■□□□ 1.66
VLDLR-201ENST00000382096 ZNF410Q86VK4 478 aa25.4■■□□□ 1.66
VLDLR-201ENST00000382096 TMEM87AQ8NBN3 555 aa25.4■■□□□ 1.66
VLDLR-201ENST00000382096 BCL7CQ8WUZ0 217 aaPredicted RBP25.4■■□□□ 1.66
VLDLR-201ENST00000382096 LPPQ93052 612 aa25.4■■□□□ 1.66
VLDLR-201ENST00000382096 FAM20AQ96MK3 541 aa25.4■■□□□ 1.66
VLDLR-201ENST00000382096 FDXACB1Q9BRP7 624 aaPredicted RBP25.4■■□□□ 1.66
VLDLR-201ENST00000382096 NRDE2Q9H7Z3 1164 aa25.4■■□□□ 1.66
VLDLR-201ENST00000382096 KCNMB3Q9NPA1 279 aa25.4■■□□□ 1.66
VLDLR-201ENST00000382096 LIMD1Q9UGP4 676 aa25.4■■□□□ 1.66
VLDLR-201ENST00000382096 ZNF623O75123 536 aa25.39■■□□□ 1.66
VLDLR-201ENST00000382096 CTDNEP1O95476 244 aa25.39■■□□□ 1.66
VLDLR-201ENST00000382096 GALTP07902 379 aa25.39■■□□□ 1.66
VLDLR-201ENST00000382096 GCFC2P16383 781 aaKnown RBP25.39■■□□□ 1.66
VLDLR-201ENST00000382096 XBP1P17861 261 aa25.39■■□□□ 1.66
VLDLR-201ENST00000382096 NBL1P41271 181 aa25.39■■□□□ 1.66
VLDLR-201ENST00000382096 RAB27AP51159 221 aa25.39■■□□□ 1.66
VLDLR-201ENST00000382096 PPP2R5CQ13362 524 aa25.39■■□□□ 1.66
VLDLR-201ENST00000382096 NOMO2Q5JPE7 1267 aa25.39■■□□□ 1.66
VLDLR-201ENST00000382096 ERICH6BQ5W0A0 696 aa25.39■■□□□ 1.66
VLDLR-201ENST00000382096 INO80BQ9C086 356 aaPredicted RBP25.39■■□□□ 1.66
VLDLR-201ENST00000382096 FAM105AQ9NUU6 356 aa25.39■■□□□ 1.66
VLDLR-201ENST00000382096 VAV3Q9UKW4 847 aa25.39■■□□□ 1.66
VLDLR-201ENST00000382096 PIN4Q9Y237 131 aaKnown RBP25.39■■□□□ 1.66
VLDLR-201ENST00000382096 CCDC194A0A1B0GVG4 234 aa25.38■■□□□ 1.65
VLDLR-201ENST00000382096 TMEM150BA6NC51 233 aa25.38■■□□□ 1.65
VLDLR-201ENST00000382096 PSMC5P62195 406 aa25.38■■□□□ 1.65
VLDLR-201ENST00000382096 ANKRD1Q15327 319 aa25.38■■□□□ 1.65
VLDLR-201ENST00000382096 LETM2Q2VYF4 491 aa25.38■■□□□ 1.65
VLDLR-201ENST00000382096 NEK8Q86SG6 692 aa25.38■■□□□ 1.65
VLDLR-201ENST00000382096 PPFIBP1Q86W92 1011 aa25.38■■□□□ 1.65
VLDLR-201ENST00000382096 VN1R3Q9BXE9 311 aa25.38■■□□□ 1.65
VLDLR-201ENST00000382096 MEIS3P2A8K0S8 358 aa25.37■■□□□ 1.65
VLDLR-201ENST00000382096 EML1O00423 815 aa25.37■■□□□ 1.65
VLDLR-201ENST00000382096 CLCN5P51795 746 aa25.37■■□□□ 1.65
VLDLR-201ENST00000382096 PTPN14Q15678 1187 aa25.37■■□□□ 1.65
VLDLR-201ENST00000382096 LONRF3Q496Y0 759 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms