RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 KLRG1Q96E93 195 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 SEC16BQ96JE7 1060 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 C12orf42Q96LP6 360 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 MXRA8Q9BRK3 442 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 SLITRK6Q9H5Y7 841 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 COL20A1Q9P218 1284 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 RBBP6Q7Z6E9 1792 aaKnown RBP9.69□□□□□ -0.86
GPNMB-202ENST00000381990 C19orf81C9J6K1 198 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 PGRMC1O00264 195 aaKnown RBP9.69□□□□□ -0.86
GPNMB-202ENST00000381990 TLR2O60603 784 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 DNAJC8O75937 253 aaPredicted RBP9.69□□□□□ -0.86
GPNMB-202ENST00000381990 BCRP11274 1271 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 PSMC6P62333 389 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 PABPC4Q13310 644 aaKnown RBP eCLIP9.69□□□□□ -0.86
GPNMB-202ENST00000381990 ARSHQ5FYA8 562 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 NIPA1Q7RTP0 329 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 HSD17B14Q9BPX1 270 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 ZNF577Q9BSK1 485 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 ATP6V0A4Q9HBG4 840 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 ZHX2Q9Y6X8 837 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 PHIPQ8WWQ0 1821 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 POLR2AP24928 1970 aaKnown RBP9.69□□□□□ -0.86
GPNMB-202ENST00000381990 VWA5AO00534 786 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 NOL4O94818 638 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 KIF4AO95239 1232 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 EYA4O95677 639 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 ARP10275 920 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 ERCC3P19447 782 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 MUTP22033 750 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 SCTRP47872 440 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 CYP4A11Q02928 519 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 CRYMQ14894 314 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 LRRC41Q15345 812 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 UAP1Q16222 522 aaPredicted RBP9.69□□□□□ -0.86
GPNMB-202ENST00000381990 ZCWPW2Q504Y3 356 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 HERC4Q5GLZ8 1057 aaPredicted RBP9.69□□□□□ -0.86
GPNMB-202ENST00000381990 NOL9Q5SY16 702 aaKnown RBP9.69□□□□□ -0.86
GPNMB-202ENST00000381990 SYTL5Q8TDW5 730 aaPredicted RBP9.69□□□□□ -0.86
GPNMB-202ENST00000381990 SEC14L1Q92503 715 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 N4BP2L2Q92802 583 aaPredicted RBP9.69□□□□□ -0.86
GPNMB-202ENST00000381990 RIT2Q99578 217 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.69□□□□□ -0.86
GPNMB-202ENST00000381990 FHDC1Q9C0D6 1143 aaPredicted RBP9.69□□□□□ -0.86
GPNMB-202ENST00000381990 CENPHQ9H3R5 247 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 RGL1Q9NZL6 768 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 PCDHA2Q9Y5H9 948 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 FRMPD4Q14CM0 1322 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 SSC5DA1L4H1 1573 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 NPHP3-ACAD11A0A0J9YXS1 232 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 IPO5O00410 1097 aaKnown RBP9.68□□□□□ -0.86
GPNMB-202ENST00000381990 KCNK3O14649 394 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 KLHL30Q0D2K2 578 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 KLHL7Q8IXQ5 586 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 ANKS4BQ8N8V4 417 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 GLIS3Q8NEA6 775 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 CCDC26Q8TAB7 109 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 LMBR1Q8WVP7 490 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 MIEF2Q96C03 454 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 ATG4CQ96DT6 458 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 TEKT3Q9BXF9 490 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 NLRC4Q9NPP4 1024 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 HOMER2Q9NSB8 354 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 RLFQ13129 1914 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 A0A087X0T9 212 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 A0A1B0GUA9 196 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 DNM1LO00429 736 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 SART1O43290 800 aaKnown RBP9.68□□□□□ -0.86
GPNMB-202ENST00000381990 MGRN1O60291 552 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 SLITRK3O94933 977 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 GSTA1P08263 222 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 FAM228BP0C875 321 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 ITGB5P18084 799 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 HMGCS2P54868 508 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 POLR2FP61218 127 aaKnown RBP9.68□□□□□ -0.86
GPNMB-202ENST00000381990 GIT2Q14161 759 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 PCNX4Q63HM2 1172 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 B3GNT9Q6UX72 402 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 CPLX4Q7Z7G2 160 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 CCT6BQ92526 530 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 FAM114A2Q9NRY5 505 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 FZD1Q9UP38 647 aa9.68□□□□□ -0.86
GPNMB-202ENST00000381990 CHMP2AO43633 222 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 OAZ1P54368 228 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 RPS6P62753 249 aaKnown RBP9.67□□□□□ -0.86
GPNMB-202ENST00000381990 CACNB1Q02641 598 aaPredicted RBP9.67□□□□□ -0.86
GPNMB-202ENST00000381990 EPHA7Q15375 998 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 ASIC2Q16515 512 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 PPP2R5EQ16537 467 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 CRELD2Q6UXH1 353 aaPredicted RBP9.67□□□□□ -0.86
GPNMB-202ENST00000381990 TMC3Q7Z5M5 1100 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 HOOK3Q86VS8 718 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 SYCE1Q8N0S2 351 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 IL31RAQ8NI17 732 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 RAPGEF5Q92565 580 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 DYDC2Q96IM9 177 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 REEP2Q9BRK0 252 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.67□□□□□ -0.86
GPNMB-202ENST00000381990 LSM14BQ9BX40 385 aaKnown RBP9.67□□□□□ -0.86
GPNMB-202ENST00000381990 BHMT2Q9H2M3 363 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 UNC45AQ9H3U1 944 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms