RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 PSMC5P62195 406 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 PPP2R2AP63151 447 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 FSCBQ5H9T9 825 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 MTRQ99707 1265 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 POLD4Q9HCU8 107 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 USP27XA6NNY8 438 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 HUS1O60921 280 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 TRIM72Q6ZMU5 477 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 RFFLQ8WZ73 363 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 WNT8AQ9H1J5 351 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 CAPN11Q9UMQ6 739 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 ESYT3A0FGR9 886 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 GMNCA6NCL1 334 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 MYO1CO00159 1063 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 MYBL1P10243 752 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 EEF1B2P24534 225 aaKnown RBP17.11■□□□□ 0.33
COL2A1-202ENST00000380518 GPC3P51654 580 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 EXOSC10Q01780 885 aaKnown RBP17.11■□□□□ 0.33
COL2A1-202ENST00000380518 DEUP1Q05D60 604 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 TRIM59Q8IWR1 403 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 TTC39CQ8N584 583 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 FBXL13Q8NEE6 735 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 GIPC2Q8TF65 315 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 KRT82Q9NSB4 513 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 IP6K2Q9UHH9 426 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 ZHX2Q9Y6X8 837 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 A2ML1A8K2U0 1454 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 MAP3K4Q9Y6R4 1608 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 ELF1P32519 619 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 FOXO4P98177 505 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 PRPF38AQ8NAV1 312 aaKnown RBP17.1■□□□□ 0.33
COL2A1-202ENST00000380518 FOXN1O15353 648 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 SPAG7O75391 227 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 RHOT1Q8IXI2 618 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 GSPT2Q8IYD1 628 aaKnown RBP17.1■□□□□ 0.33
COL2A1-202ENST00000380518 LXNQ9BS40 222 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 TTC7AQ9ULT0 858 aaPredicted RBP17.1■□□□□ 0.33
COL2A1-202ENST00000380518 SLC8A2Q9UPR5 921 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 MRFAP1Q9Y605 127 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 PFDN1O60925 122 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 NFKBIAP25963 317 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 PDXDC1Q6P996 788 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 PIP4K2CQ8TBX8 421 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 ZNF302Q9NR11 478 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 HDAC6Q9UBN7 1215 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 GABBR1Q9UBS5 961 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 BRAFP15056 766 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 GNA15P30679 374 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 STAT3P40763 770 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 YWHAHQ04917 246 aaPredicted RBP17.1■□□□□ 0.33
COL2A1-202ENST00000380518 HP1BP3Q5SSJ5 553 aaPredicted RBP17.1■□□□□ 0.33
COL2A1-202ENST00000380518 ZNF746Q6NUN9 644 aaPredicted RBP17.1■□□□□ 0.33
COL2A1-202ENST00000380518 FRMD5Q7Z6J6 570 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 GLYCTKQ8IVS8 523 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 THOC1Q96FV9 657 aaKnown RBP17.1■□□□□ 0.33
COL2A1-202ENST00000380518 FAM84BQ96KN1 310 aaPredicted RBP17.1■□□□□ 0.33
COL2A1-202ENST00000380518 STAP1Q9ULZ2 295 aa17.1■□□□□ 0.33
COL2A1-202ENST00000380518 ECE2O60344 883 aa17.09■□□□□ 0.33
COL2A1-202ENST00000380518 FDX1P10109 184 aa17.09■□□□□ 0.33
COL2A1-202ENST00000380518 GNAT1P11488 350 aa17.09■□□□□ 0.33
COL2A1-202ENST00000380518 BEST2Q8NFU1 509 aa17.09■□□□□ 0.33
COL2A1-202ENST00000380518 TRIM15Q9C019 465 aa17.09■□□□□ 0.33
COL2A1-202ENST00000380518 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.09■□□□□ 0.33
COL2A1-202ENST00000380518 FBXO2Q9UK22 296 aaPredicted RBP17.09■□□□□ 0.33
COL2A1-202ENST00000380518 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.09■□□□□ 0.33
COL2A1-202ENST00000380518 PSMC1P62191 440 aaKnown RBP17.09■□□□□ 0.33
COL2A1-202ENST00000380518 PDIA5Q14554 519 aa17.09■□□□□ 0.33
COL2A1-202ENST00000380518 RABL6Q3YEC7 729 aaPredicted RBP17.09■□□□□ 0.33
COL2A1-202ENST00000380518 STOX1Q6ZVD7 989 aa17.09■□□□□ 0.33
COL2A1-202ENST00000380518 THEM5Q8N1Q8 247 aa17.09■□□□□ 0.33
COL2A1-202ENST00000380518 ZC3H15Q8WU90 426 aaKnown RBP17.09■□□□□ 0.33
COL2A1-202ENST00000380518 NRBF2Q96F24 287 aa17.09■□□□□ 0.33
COL2A1-202ENST00000380518 CCSER1Q9C0I3 900 aa17.09■□□□□ 0.33
COL2A1-202ENST00000380518 GGPS1O95749 300 aa17.09■□□□□ 0.33
COL2A1-202ENST00000380518 SCARF1Q14162 830 aa17.09■□□□□ 0.33
COL2A1-202ENST00000380518 METTL16Q86W50 562 aaKnown RBP17.09■□□□□ 0.33
COL2A1-202ENST00000380518 NDUFAF2Q8N183 169 aa17.09■□□□□ 0.33
COL2A1-202ENST00000380518 WRNIP1Q96S55 665 aa17.09■□□□□ 0.33
COL2A1-202ENST00000380518 ZBTB18Q99592 522 aa17.09■□□□□ 0.33
COL2A1-202ENST00000380518 BEND6Q5SZJ8 279 aaPredicted RBP17.09■□□□□ 0.33
COL2A1-202ENST00000380518 SWSAP1Q6NVH7 229 aa17.09■□□□□ 0.33
COL2A1-202ENST00000380518 EIF2AK1Q9BQI3 630 aaKnown RBP17.09■□□□□ 0.33
COL2A1-202ENST00000380518 HECW2Q9P2P5 1572 aa17.09■□□□□ 0.33
COL2A1-202ENST00000380518 ABCC3O15438 1527 aa17.09■□□□□ 0.33
COL2A1-202ENST00000380518 FCER1AP12319 257 aa17.08■□□□□ 0.33
COL2A1-202ENST00000380518 MMS22LQ6ZRQ5 1243 aa17.08■□□□□ 0.33
COL2A1-202ENST00000380518 EXT2Q93063 718 aa17.08■□□□□ 0.33
COL2A1-202ENST00000380518 CYTH2Q99418 400 aa17.08■□□□□ 0.33
COL2A1-202ENST00000380518 GOLGA8MH3BSY2 632 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 PDXKO00764 312 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 CHUKO15111 745 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 GPSM2P81274 684 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 EPHA7Q15375 998 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 ACAD11Q709F0 780 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 ST13P4Q8IZP2 240 aaPredicted RBP17.08■□□□□ 0.32
COL2A1-202ENST00000380518 VPS11Q9H270 941 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 PIM2Q9P1W9 311 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 LIMA1Q9UHB6 759 aaKnown RBP17.08■□□□□ 0.32
COL2A1-202ENST00000380518 PCSK1NQ9UHG2 260 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 TRIM49P0CI25 452 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms