RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 UHRF1BP1LA0JNW5 1464 aa13.21□□□□□ -0.29
CHD3-203ENST00000380358 CYTH3O43739 400 aa13.21□□□□□ -0.3
CHD3-203ENST00000380358 HMOX2P30519 316 aa13.21□□□□□ -0.3
CHD3-203ENST00000380358 RC3H1Q5TC82 1133 aaKnown RBP13.21□□□□□ -0.3
CHD3-203ENST00000380358 SWSAP1Q6NVH7 229 aa13.21□□□□□ -0.3
CHD3-203ENST00000380358 PI16Q6UXB8 463 aa13.21□□□□□ -0.3
CHD3-203ENST00000380358 BEST2Q8NFU1 509 aa13.21□□□□□ -0.3
CHD3-203ENST00000380358 SAAL1Q96ER3 474 aa13.21□□□□□ -0.3
CHD3-203ENST00000380358 HES6Q96HZ4 224 aa13.21□□□□□ -0.3
CHD3-203ENST00000380358 YY1AP1Q9H869 796 aa13.21□□□□□ -0.3
CHD3-203ENST00000380358 WDR75Q8IWA0 830 aaKnown RBP13.21□□□□□ -0.3
CHD3-203ENST00000380358 SLC25A41Q8N5S1 370 aa13.21□□□□□ -0.3
CHD3-203ENST00000380358 MAGED4Q96JG8 741 aa13.21□□□□□ -0.3
CHD3-203ENST00000380358 RMDN3Q96TC7 470 aa13.21□□□□□ -0.3
CHD3-203ENST00000380358 NHEJ1Q9H9Q4 299 aaPredicted RBP13.21□□□□□ -0.3
CHD3-203ENST00000380358 STK17AQ9UEE5 414 aa13.21□□□□□ -0.3
CHD3-203ENST00000380358 FANCAO15360 1455 aa13.21□□□□□ -0.3
CHD3-203ENST00000380358 YEATS2Q9ULM3 1422 aa13.21□□□□□ -0.3
CHD3-203ENST00000380358 A8MXQ7 604 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 CYBBP04839 570 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 GYS2P54840 703 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 CEP78Q5JTW2 689 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 SPATA1Q5VX52 437 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 PDXDC1Q6P996 788 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 PDIK1LQ8N165 341 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 ALDH18A1P54886 795 aaKnown RBP13.2□□□□□ -0.3
CHD3-203ENST00000380358 GRIN1Q05586 938 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 TWF1Q12792 350 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 PPP2R5BQ15173 497 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 ASPRV1Q53RT3 343 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 BEND6Q5SZJ8 279 aaPredicted RBP13.2□□□□□ -0.3
CHD3-203ENST00000380358 TRIM69Q86WT6 500 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 LRRC37BQ96QE4 947 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 SH2D3AQ9BRG2 576 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 PGRMC1O00264 195 aaKnown RBP13.2□□□□□ -0.3
CHD3-203ENST00000380358 PLCG1P19174 1290 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 MTM1Q13496 603 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 SPATA2LQ8IUW3 424 aaPredicted RBP13.2□□□□□ -0.3
CHD3-203ENST00000380358 GSPT2Q8IYD1 628 aaKnown RBP13.2□□□□□ -0.3
CHD3-203ENST00000380358 COG1Q8WTW3 980 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 P2RX5Q93086 422 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 FAM167BQ9BTA0 163 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 BHMT2Q9H2M3 363 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 TRPM2O94759 1503 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 PLB1Q6P1J6 1458 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 SDE2Q6IQ49 451 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 LRRC8AQ8IWT6 810 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 ZNF280CQ8ND82 737 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 SMARCAD1Q9H4L7 1026 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 GGT7Q9UJ14 662 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 TCN1P20061 433 aaPredicted RBP13.2□□□□□ -0.3
CHD3-203ENST00000380358 PCYT1AP49585 367 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 NNTQ13423 1086 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 ERAP2Q6P179 960 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 DSCC1Q9BVC3 393 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 ADAM22Q9P0K1 906 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 MAP3K13O43283 966 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 TJP3O95049 919 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 TFRCP02786 760 aaKnown RBP13.2□□□□□ -0.3
CHD3-203ENST00000380358 NEK2P51955 445 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 LRRC14Q15048 493 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 SRRM1Q8IYB3 904 aaKnown RBP13.2□□□□□ -0.3
CHD3-203ENST00000380358 RUNDC3BQ96NL0 473 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 ATP11BQ9Y2G3 1177 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 PCDHA13Q9Y5I0 950 aa13.2□□□□□ -0.3
CHD3-203ENST00000380358 RASSF10A6NK89 507 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 GAP43P17677 238 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 MAPK6Q16659 721 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 PAN2Q504Q3 1202 aaKnown RBP13.19□□□□□ -0.3
CHD3-203ENST00000380358 MMS22LQ6ZRQ5 1243 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 IFNEQ86WN2 208 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 ANKMY2Q8IV38 441 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 WDR11Q9BZH6 1224 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 PRR12Q9ULL5 1215 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.19□□□□□ -0.3
CHD3-203ENST00000380358 FKBP9O95302 570 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 FKBP9P1Q75LS8 142 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 SCG3Q8WXD2 468 aaKnown RBP13.19□□□□□ -0.3
CHD3-203ENST00000380358 SPATS2LQ9NUQ6 558 aaKnown RBP13.19□□□□□ -0.3
CHD3-203ENST00000380358 SERPINB13Q9UIV8 391 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 PIN4Q9Y237 131 aaKnown RBP13.19□□□□□ -0.3
CHD3-203ENST00000380358 MAGI1Q96QZ7 1491 aaPredicted RBP13.19□□□□□ -0.3
CHD3-203ENST00000380358 PDGFRBP09619 1106 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 KRT4P19013 534 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 C6orf10Q5SRN2 563 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 HIBCHQ6NVY1 386 aaPredicted RBP13.19□□□□□ -0.3
CHD3-203ENST00000380358 FMO2Q99518 471 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 PITPNM3Q9BZ71 974 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 KCNH4Q9UQ05 1017 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 PKP3Q9Y446 797 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 ENDOD1O94919 500 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 KRT8P05787 483 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 KRT31Q15323 416 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 MGAT5BQ3V5L5 792 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 IYDQ6PHW0 289 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.19□□□□□ -0.3
CHD3-203ENST00000380358 ICA1LQ8NDH6 482 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 RRAGDQ9NQL2 400 aaPredicted RBP13.19□□□□□ -0.3
CHD3-203ENST00000380358 NFU1Q9UMS0 254 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 RASA4BC9J798 803 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms