RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 ARID5AQ03989 594 aa21.65■■□□□ 1.06
PDLIM5-205ENST00000380180 HSDL1Q3SXM5 330 aa21.65■■□□□ 1.06
PDLIM5-205ENST00000380180 ANKRD23Q86SG2 305 aa21.65■■□□□ 1.06
PDLIM5-205ENST00000380180 TMEM143Q96AN5 459 aa21.65■■□□□ 1.06
PDLIM5-205ENST00000380180 SPAG5Q96R06 1193 aa21.65■■□□□ 1.06
PDLIM5-205ENST00000380180 PCDHA13Q9Y5I0 950 aa21.65■■□□□ 1.06
PDLIM5-205ENST00000380180 VAMP7P51809 220 aa21.65■■□□□ 1.06
PDLIM5-205ENST00000380180 CCDC62Q6P9F0 684 aa21.65■■□□□ 1.06
PDLIM5-205ENST00000380180 ERO1AQ96HE7 468 aa21.65■■□□□ 1.06
PDLIM5-205ENST00000380180 GPR20Q99678 358 aa21.65■■□□□ 1.06
PDLIM5-205ENST00000380180 LOC102724159A0A0B4J2E5 919 aa21.64■■□□□ 1.05
PDLIM5-205ENST00000380180 MAPK13O15264 365 aa21.64■■□□□ 1.05
PDLIM5-205ENST00000380180 GFPT1Q06210 699 aaPredicted RBP21.64■■□□□ 1.05
PDLIM5-205ENST00000380180 PWP2Q15269 919 aaKnown RBP21.64■■□□□ 1.05
PDLIM5-205ENST00000380180 TARBP2Q15633 366 aaKnown RBP21.64■■□□□ 1.05
PDLIM5-205ENST00000380180 SPRYD7Q5W111 196 aa21.64■■□□□ 1.05
PDLIM5-205ENST00000380180 GJB7Q6PEY0 223 aa21.64■■□□□ 1.05
PDLIM5-205ENST00000380180 IFIH1Q9BYX4 1025 aaKnown RBP21.64■■□□□ 1.05
PDLIM5-205ENST00000380180 ARHGAP28Q9P2N2 729 aa21.64■■□□□ 1.05
PDLIM5-205ENST00000380180 AJAP1Q9UKB5 411 aaPredicted RBP21.64■■□□□ 1.05
PDLIM5-205ENST00000380180 GOLGA8IPA6NC78 632 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 ASB14A6NK59 587 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 GOLGA8JA6NMD2 632 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 ASIC2Q16515 512 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 SLC39A4Q6P5W5 647 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 DHX37Q8IY37 1157 aaKnown RBP21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 LRRN4CLQ8ND94 238 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 SLC7A3Q8WY07 619 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 AZI2Q9H6S1 392 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 PDGFCQ9NRA1 345 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 DUSP10Q9Y6W6 482 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 SIP14410 1827 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 CTAGE9A4FU28 777 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 NOP56O00567 594 aaKnown RBP21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 TXNP10599 105 aaKnown RBP21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 GCLCP48506 637 aaPredicted RBP21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 RBM10P98175 930 aaKnown RBP21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 KLHL30Q0D2K2 578 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 KIF5AQ12840 1032 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 TMEM63BQ5T3F8 832 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 TAS1R3Q7RTX0 852 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 IRF2BP2Q7Z5L9 587 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 COPS5Q92905 334 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 KCNG1Q9UIX4 513 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 MYO6Q9UM54 1294 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 MRFAP1Q9Y605 127 aa21.63■■□□□ 1.05
PDLIM5-205ENST00000380180 EMSYQ7Z589 1322 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 ADORA2AP29274 412 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 ARL2P36404 184 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 MYL7Q01449 175 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 NCBP1Q09161 790 aaKnown RBP21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 ENOX2Q16206 610 aaKnown RBP21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 ZNF792Q3KQV3 632 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 IQCEQ6IPM2 695 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 ARMCX2Q7L311 632 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 PLEKHO2Q8TD55 490 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 ASAP3Q8TDY4 903 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 GLG1Q92896 1179 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 SAAL1Q96ER3 474 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 SPATA33Q96N06 139 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 MORF4L1Q9UBU8 362 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 EVPLQ92817 2033 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 H0YCG3 227 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 ZBTB48P10074 688 aaPredicted RBP21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 GLRA2P23416 452 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 RFC5P40937 340 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 JAM2P57087 298 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 PPP3CAQ08209 521 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 SNRNP35Q16560 246 aaKnown RBP21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 BRDTQ58F21 947 aaPredicted RBP21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 C1orf220Q5T0J3 134 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 CBWD2Q8IUF1 395 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 PTPN18Q99952 460 aa21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 V9GYY5 206 aaPredicted RBP21.62■■□□□ 1.05
PDLIM5-205ENST00000380180 TRPM7Q96QT4 1865 aa21.61■■□□□ 1.05
PDLIM5-205ENST00000380180 RBAK-RBAKDNI3L0D1 243 aa21.61■■□□□ 1.05
PDLIM5-205ENST00000380180 HNRNPDLO14979 420 aaKnown RBP21.61■■□□□ 1.05
PDLIM5-205ENST00000380180 LGR5O75473 907 aa21.61■■□□□ 1.05
PDLIM5-205ENST00000380180 ADRB2P07550 413 aa21.61■■□□□ 1.05
PDLIM5-205ENST00000380180 MAGEA1P43355 309 aa21.61■■□□□ 1.05
PDLIM5-205ENST00000380180 TTLL4Q14679 1199 aa21.61■■□□□ 1.05
PDLIM5-205ENST00000380180 TRIM50Q86XT4 487 aa21.61■■□□□ 1.05
PDLIM5-205ENST00000380180 ZNF710Q8N1W2 664 aa21.61■■□□□ 1.05
PDLIM5-205ENST00000380180 POMGNT1Q8WZA1 660 aa21.61■■□□□ 1.05
PDLIM5-205ENST00000380180 NAPGQ99747 312 aaPredicted RBP21.61■■□□□ 1.05
PDLIM5-205ENST00000380180 CARD6Q9BX69 1037 aa21.61■■□□□ 1.05
PDLIM5-205ENST00000380180 TSGA10Q9BZW7 698 aa21.61■■□□□ 1.05
PDLIM5-205ENST00000380180 INTS2Q9H0H0 1204 aaKnown RBP21.61■■□□□ 1.05
PDLIM5-205ENST00000380180 STRNO43815 780 aa21.6■■□□□ 1.05
PDLIM5-205ENST00000380180 MARK3P27448 753 aa21.6■■□□□ 1.05
PDLIM5-205ENST00000380180 ABCD1P33897 745 aa21.6■■□□□ 1.05
PDLIM5-205ENST00000380180 CST9Q5W186 159 aa21.6■■□□□ 1.05
PDLIM5-205ENST00000380180 LMO3Q8TAP4 145 aa21.6■■□□□ 1.05
PDLIM5-205ENST00000380180 FAM167AQ96KS9 214 aa21.6■■□□□ 1.05
PDLIM5-205ENST00000380180 DOCK3Q8IZD9 2030 aa21.6■■□□□ 1.05
PDLIM5-205ENST00000380180 NAMPTP43490 491 aa21.6■■□□□ 1.05
PDLIM5-205ENST00000380180 GCLMP48507 274 aa21.6■■□□□ 1.05
PDLIM5-205ENST00000380180 MCCD1P59942 119 aaPredicted RBP21.6■■□□□ 1.05
PDLIM5-205ENST00000380180 EHBP1Q8NDI1 1231 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms