RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 PCDHA10Q9Y5I2 948 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 USH1CQ9Y6N9 552 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 GOLGA8QA0A0J9YX86 632 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 GOLGA8OA6NCC3 632 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 ANKRD65E5RJM6 399 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 GOLGA8NF8WBI6 632 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 GGPS1O95749 300 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 PLS3P13797 630 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 UCHL3P15374 230 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 GUCY2CP25092 1073 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 DHX34Q14147 1143 aaKnown RBP12.07□□□□□ -0.48
RPGR-203ENST00000378505 HHIPL2Q6UWX4 724 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 SMIM5Q71RC9 77 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 WRNIP1Q96S55 665 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 MAPK13O15264 365 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 OATP04181 439 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 PPP4CP60510 307 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 PASD1Q8IV76 773 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 TRIM59Q8IWR1 403 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 SAAL1Q96ER3 474 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 STK33Q9BYT3 514 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 TLK1Q9UKI8 766 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 RASA4BC9J798 803 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 RASA4O43374 803 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 ZNF699Q32M78 642 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 METTL23Q86XA0 190 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 CLEC10AQ8IUN9 316 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 SIX6OS1Q8N1H7 587 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 RNPC3Q96LT9 517 aaKnown RBP12.07□□□□□ -0.48
RPGR-203ENST00000378505 TTC25Q96NG3 672 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 AGPAT1Q99943 283 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 AMACRQ9UHK6 382 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 GPR75-ASB3A0A0A6YYF3 556 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 WDR91A4D1P6 747 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 PSMD14O00487 310 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 GPR162Q16538 588 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 RHOT1Q8IXI2 618 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 BBS5Q8N3I7 341 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 GJD4Q96KN9 370 aaPredicted RBP12.07□□□□□ -0.48
RPGR-203ENST00000378505 ERGIC2Q96RQ1 377 aa12.07□□□□□ -0.48
RPGR-203ENST00000378505 A0A1W2PQJ5 194 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 MYBL1P10243 752 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 SERPINB6P35237 376 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 FXR2P51116 673 aaKnown RBP eCLIP12.06□□□□□ -0.48
RPGR-203ENST00000378505 CCDC137Q6PK04 289 aaKnown RBP12.06□□□□□ -0.48
RPGR-203ENST00000378505 RNF25Q96BH1 459 aaPredicted RBP12.06□□□□□ -0.48
RPGR-203ENST00000378505 MTRQ99707 1265 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 ZNF185O15231 689 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 CCNI2Q6ZMN8 369 aaPredicted RBP12.06□□□□□ -0.48
RPGR-203ENST00000378505 SRRM1Q8IYB3 904 aaKnown RBP12.06□□□□□ -0.48
RPGR-203ENST00000378505 REEP2Q9BRK0 252 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 TIPINQ9BVW5 301 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 KLC2Q9H0B6 622 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 SMYD2Q9NRG4 433 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 MID2Q9UJV3 735 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 FBXL5Q9UKA1 691 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 NPHP3-ACAD11A0A0J9YXS1 232 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 ARHGEF37A1IGU5 675 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 ZNF18P17022 549 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 TNFAIP2Q03169 654 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 ZNF568Q3ZCX4 644 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 MMEL1Q495T6 779 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 CATSPER4Q7RTX7 472 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 LINC00116Q8NCU8 138 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 L2HGDHQ9H9P8 463 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 VCX3AQ9NNX9 186 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 ZNF302Q9NR11 478 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 SPATA31A1Q5TZJ5 1347 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 PITPNM2Q9BZ72 1349 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 NEURL4Q96JN8 1562 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 ENTPD3O75355 529 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 CDO1Q16878 200 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 DAGLBQ8NCG7 672 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 OR6B3Q8NGW1 331 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 C2orf40Q9H1Z8 148 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 ASNSD1Q9NWL6 643 aa12.06□□□□□ -0.48
RPGR-203ENST00000378505 OPHN1O60890 802 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 KRT7P08729 469 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 GNA15P30679 374 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 GCKP35557 465 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 GALCP54803 685 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 PPP6R3Q5H9R7 873 aaPredicted RBP12.05□□□□□ -0.48
RPGR-203ENST00000378505 ATG16L1Q676U5 607 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 CDC42EP5Q6NZY7 148 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 TBC1D1Q86TI0 1168 aaPredicted RBP12.05□□□□□ -0.48
RPGR-203ENST00000378505 GPD1LQ8N335 351 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 KCTD17Q8N5Z5 321 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 HSPH1Q92598 858 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 MYCBPQ99417 103 aaPredicted RBP12.05□□□□□ -0.48
RPGR-203ENST00000378505 KCND2Q9NZV8 630 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 TRIM10Q9UDY6 481 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 IP6K2Q9UHH9 426 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 UBE4BO95155 1302 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 TOM1L1O75674 476 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 RPSAP08865 295 aaKnown RBP12.05□□□□□ -0.48
RPGR-203ENST00000378505 ESRRAP11474 423 aaPredicted RBP12.05□□□□□ -0.48
RPGR-203ENST00000378505 PHKA2P46019 1235 aa12.05□□□□□ -0.48
RPGR-203ENST00000378505 SH3BGRP55822 239 aaPredicted RBP12.05□□□□□ -0.48
RPGR-203ENST00000378505 SPOUT1Q5T280 376 aaKnown RBP12.05□□□□□ -0.48
RPGR-203ENST00000378505 FBXL16Q8N461 479 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms