RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 GTPBP10A4D1E9 387 aaKnown RBP19.45■□□□□ 0.7
GNE-201ENST00000377902 ATMINO43313 823 aaPredicted RBP19.45■□□□□ 0.7
GNE-201ENST00000377902 VIMP08670 466 aaKnown RBP19.45■□□□□ 0.7
GNE-201ENST00000377902 LRRC14Q15048 493 aa19.45■□□□□ 0.7
GNE-201ENST00000377902 TRAPPC3LQ5T215 181 aa19.45■□□□□ 0.7
GNE-201ENST00000377902 ARMC9Q7Z3E5 817 aa19.45■□□□□ 0.7
GNE-201ENST00000377902 TBC1D22AQ8WUA7 517 aa19.45■□□□□ 0.7
GNE-201ENST00000377902 POP1Q99575 1024 aaKnown RBP19.45■□□□□ 0.7
GNE-201ENST00000377902 BAIAP2L1Q9UHR4 511 aa19.45■□□□□ 0.7
GNE-201ENST00000377902 FAM13AO94988 1023 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 KCNJ1P48048 391 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 MSL1Q68DK7 614 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 CDC42EP5Q6NZY7 148 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 BANK1Q8NDB2 785 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 TCP11Q8WWU5 503 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 BTBD6Q96KE9 485 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 ACP6Q9NPH0 428 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 INTS9Q9NV88 658 aaKnown RBP19.44■□□□□ 0.7
GNE-201ENST00000377902 CD2APQ9Y5K6 639 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 SMCHD1A6NHR9 2005 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 NRAPQ86VF7 1730 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 MGRN1O60291 552 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 RPSAP08865 295 aaKnown RBP19.44■□□□□ 0.7
GNE-201ENST00000377902 SCP2P22307 547 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 DLG4P78352 724 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 ACCSLQ4AC99 568 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 Q4G0T1 1027 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 OTUD6AQ7L8S5 288 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 CENPTQ96BT3 561 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 HOOK2Q96ED9 719 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 ABCF3Q9NUQ8 709 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 CTTNBP2NLQ9P2B4 639 aa19.44■□□□□ 0.7
GNE-201ENST00000377902 DNAJC8O75937 253 aaPredicted RBP19.43■□□□□ 0.7
GNE-201ENST00000377902 EYA4O95677 639 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 CREB1P16220 341 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 ELF1P32519 619 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 NF2P35240 595 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 IKQ13123 557 aaPredicted RBP19.43■□□□□ 0.7
GNE-201ENST00000377902 PIGWQ7Z7B1 504 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 TBC1D1Q86TI0 1168 aaPredicted RBP19.43■□□□□ 0.7
GNE-201ENST00000377902 CCDC25Q86WR0 208 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 MGARPQ8TDB4 240 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 PGM2Q96G03 612 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 APEX2Q9UBZ4 518 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 AGAP1Q9UPQ3 857 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 TRPC6Q9Y210 931 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 TISP43B9A030 160 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 PPP1R12BO60237 982 aaPredicted RBP19.43■□□□□ 0.7
GNE-201ENST00000377902 FTLP02792 175 aaPredicted RBP19.43■□□□□ 0.7
GNE-201ENST00000377902 CLTAP09496 248 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 MESDQ14696 234 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 DOK7Q18PE1 504 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 FAM196AQ6ZSG2 479 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 SIAH1Q8IUQ4 282 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 DYDC2Q96IM9 177 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 MLXIPLQ9NP71 852 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 FRMPD4Q14CM0 1322 aa19.43■□□□□ 0.7
GNE-201ENST00000377902 ANKRD62A6NC57 917 aa19.42■□□□□ 0.7
GNE-201ENST00000377902 CCDC169A6NNP5 214 aa19.42■□□□□ 0.7
GNE-201ENST00000377902 ATP6V1G2O95670 118 aa19.42■□□□□ 0.7
GNE-201ENST00000377902 ZNF76P36508 570 aa19.42■□□□□ 0.7
GNE-201ENST00000377902 UBXN2AP68543 259 aa19.42■□□□□ 0.7
GNE-201ENST00000377902 PNMA8AQ86V59 439 aaPredicted RBP19.42■□□□□ 0.7
GNE-201ENST00000377902 OLFML3Q9NRN5 406 aa19.42■□□□□ 0.7
GNE-201ENST00000377902 EP400Q96L91 3159 aa19.42■□□□□ 0.7
GNE-201ENST00000377902 FOCADQ5VW36 1801 aa19.42■□□□□ 0.7
GNE-201ENST00000377902 ATP8B3O60423 1300 aa19.42■□□□□ 0.7
GNE-201ENST00000377902 FAM187AA6NFU0 413 aa19.42■□□□□ 0.7
GNE-201ENST00000377902 SLITRK3O94933 977 aa19.42■□□□□ 0.7
GNE-201ENST00000377902 PYGMP11217 842 aa19.42■□□□□ 0.7
GNE-201ENST00000377902 CCDC137Q6PK04 289 aaKnown RBP19.42■□□□□ 0.7
GNE-201ENST00000377902 C1orf186Q6ZWK4 172 aa19.42■□□□□ 0.7
GNE-201ENST00000377902 FIZ1Q96SL8 496 aa19.42■□□□□ 0.7
GNE-201ENST00000377902 NOD2Q9HC29 1040 aa19.42■□□□□ 0.7
GNE-201ENST00000377902 WRAP73Q9P2S5 460 aaPredicted RBP19.42■□□□□ 0.7
GNE-201ENST00000377902 PCDHA3Q9Y5H8 950 aa19.42■□□□□ 0.7
GNE-201ENST00000377902 PHF2O75151 1096 aa19.41■□□□□ 0.7
GNE-201ENST00000377902 GHRP10912 638 aa19.41■□□□□ 0.7
GNE-201ENST00000377902 AP3B2Q13367 1082 aa19.41■□□□□ 0.7
GNE-201ENST00000377902 DHX34Q14147 1143 aaKnown RBP19.41■□□□□ 0.7
GNE-201ENST00000377902 MAEAQ7L5Y9 396 aa19.41■□□□□ 0.7
GNE-201ENST00000377902 ANKS4BQ8N8V4 417 aa19.41■□□□□ 0.7
GNE-201ENST00000377902 KAT5Q92993 513 aa19.41■□□□□ 0.7
GNE-201ENST00000377902 NAP1L3Q99457 506 aaPredicted RBP19.41■□□□□ 0.7
GNE-201ENST00000377902 AGPAT1Q99943 283 aa19.41■□□□□ 0.7
GNE-201ENST00000377902 DDX23Q9BUQ8 820 aaKnown RBP19.41■□□□□ 0.7
GNE-201ENST00000377902 PCIF1Q9H4Z3 704 aa19.41■□□□□ 0.7
GNE-201ENST00000377902 UBE2TQ9NPD8 197 aaPredicted RBP19.41■□□□□ 0.7
GNE-201ENST00000377902 AGPAT3Q9NRZ7 376 aa19.41■□□□□ 0.7
GNE-201ENST00000377902 SUFUQ9UMX1 484 aa19.41■□□□□ 0.7
GNE-201ENST00000377902 ADAMTSL1Q8N6G6 1762 aa19.41■□□□□ 0.7
GNE-201ENST00000377902 COMTP21964 271 aa19.41■□□□□ 0.7
GNE-201ENST00000377902 SREBF1P36956 1147 aa19.41■□□□□ 0.7
GNE-201ENST00000377902 MYL7Q01449 175 aa19.41■□□□□ 0.7
GNE-201ENST00000377902 LONRF1Q17RB8 773 aa19.41■□□□□ 0.7
GNE-201ENST00000377902 MOXD1Q6UVY6 613 aa19.41■□□□□ 0.7
GNE-201ENST00000377902 ARHGEF19Q8IW93 802 aa19.41■□□□□ 0.7
GNE-201ENST00000377902 AMNQ9BXJ7 453 aa19.41■□□□□ 0.7
GNE-201ENST00000377902 SLC12A4Q9UP95 1085 aa19.41■□□□□ 0.7
GNE-201ENST00000377902 DIS3Q9Y2L1 958 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms