RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 FOXN3O00409 490 aaPredicted RBP11.56□□□□□ -0.56
ABCF1-202ENST00000376545 MTA2O94776 668 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 ERLIN2O94905 339 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 CFBP00751 764 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 TRIM49P0CI25 452 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 TRIM49CP0CI26 452 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 EPC2Q52LR7 807 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 ODR4Q5SWX8 454 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 C1orf220Q5T0J3 134 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 CC2D2BQ6DHV5 1058 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 SUGP1Q8IWZ8 645 aaKnown RBP11.56□□□□□ -0.56
ABCF1-202ENST00000376545 RHOT2Q8IXI1 618 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 C7orf43Q8WVR3 580 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 KAT2BQ92831 832 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 TLCD1Q96CP7 247 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 CSRNP1Q96S65 589 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 NAP1L3Q99457 506 aaPredicted RBP11.56□□□□□ -0.56
ABCF1-202ENST00000376545 CELF4Q9BZC1 486 aaKnown RBP11.56□□□□□ -0.56
ABCF1-202ENST00000376545 EPB41L4BQ9H329 900 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 RABEP2Q9H5N1 569 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 ARHGEF10LQ9HCE6 1279 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 RPTORQ8N122 1335 aa11.56□□□□□ -0.56
ABCF1-202ENST00000376545 ZNFX1Q9P2E3 1918 aaKnown RBP11.56□□□□□ -0.56
ABCF1-202ENST00000376545 GOLGA6L10A6NI86 522 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 TRAPPC3O43617 180 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 GHRHRQ02643 423 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 ALCAMQ13740 583 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 DHX34Q14147 1143 aaKnown RBP11.55□□□□□ -0.56
ABCF1-202ENST00000376545 SKIDA1Q1XH10 827 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 SPICE1Q8N0Z3 855 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 BANK1Q8NDB2 785 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 ACER1Q8TDN7 264 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 ERP44Q9BS26 406 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 ZNF577Q9BSK1 485 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 RAB17Q9H0T7 212 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 EHMT1Q9H9B1 1298 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 GOPCQ9HD26 462 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 MRPL11Q9Y3B7 192 aaKnown RBP11.55□□□□□ -0.56
ABCF1-202ENST00000376545 PFASO15067 1338 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 C5orf60A6NFR6 353 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 CHMP2AO43633 222 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 HIP1RO75146 1068 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 NUDT17P0C025 328 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 TNFAIP3P21580 790 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 CYP2J2P51589 502 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 HSD17B4P51659 736 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 EIF3BP55884 814 aaKnown RBP11.55□□□□□ -0.56
ABCF1-202ENST00000376545 MXRA8Q9BRK3 442 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 LXNQ9BS40 222 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 TEKT3Q9BXF9 490 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 ST6GALNAC4Q9H4F1 302 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 ERVK-5Q9HDB9 667 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 PTGIRP43119 386 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 SEC24CP53992 1094 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 PPP2R2AP63151 447 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 INTS8Q75QN2 995 aaKnown RBP11.55□□□□□ -0.56
ABCF1-202ENST00000376545 NIPA1Q7RTP0 329 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 CHURC1Q8WUH1 139 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 ALG3Q92685 438 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.55□□□□□ -0.56
ABCF1-202ENST00000376545 CNOT8Q9UFF9 292 aaKnown RBP11.55□□□□□ -0.56
ABCF1-202ENST00000376545 DBR1Q9UK59 544 aaKnown RBP11.55□□□□□ -0.56
ABCF1-202ENST00000376545 PCDHA3Q9Y5H8 950 aa11.55□□□□□ -0.56
ABCF1-202ENST00000376545 MIF4GDA9UHW6 222 aaKnown RBP11.54□□□□□ -0.56
ABCF1-202ENST00000376545 DHX15O43143 795 aaKnown RBP11.54□□□□□ -0.56
ABCF1-202ENST00000376545 MMP10P09238 476 aa11.54□□□□□ -0.56
ABCF1-202ENST00000376545 CTNNA2P26232 953 aa11.54□□□□□ -0.56
ABCF1-202ENST00000376545 INPP5BP32019 993 aa11.54□□□□□ -0.56
ABCF1-202ENST00000376545 SNRPFP62306 86 aaKnown RBP11.54□□□□□ -0.56
ABCF1-202ENST00000376545 DLG4P78352 724 aa11.54□□□□□ -0.56
ABCF1-202ENST00000376545 EP400NLQ6ZTU2 488 aa11.54□□□□□ -0.56
ABCF1-202ENST00000376545 MICALCLQ6ZW33 695 aa11.54□□□□□ -0.56
ABCF1-202ENST00000376545 MICALL1Q8N3F8 863 aa11.54□□□□□ -0.56
ABCF1-202ENST00000376545 PRPF38AQ8NAV1 312 aaKnown RBP11.54□□□□□ -0.56
ABCF1-202ENST00000376545 CD101Q93033 1021 aa11.54□□□□□ -0.56
ABCF1-202ENST00000376545 RPS6KC1Q96S38 1066 aa11.54□□□□□ -0.56
ABCF1-202ENST00000376545 TMEM206Q9H813 350 aa11.54□□□□□ -0.56
ABCF1-202ENST00000376545 ALG6Q9Y672 507 aa11.54□□□□□ -0.56
ABCF1-202ENST00000376545 IPO5O00410 1097 aaKnown RBP11.54□□□□□ -0.56
ABCF1-202ENST00000376545 ALAS1P13196 640 aa11.54□□□□□ -0.56
ABCF1-202ENST00000376545 LIG3P49916 1009 aa11.54□□□□□ -0.56
ABCF1-202ENST00000376545 PEX5P50542 639 aa11.54□□□□□ -0.56
ABCF1-202ENST00000376545 DR1Q01658 176 aa11.54□□□□□ -0.56
ABCF1-202ENST00000376545 DHX9Q08211 1270 aaKnown RBP11.54□□□□□ -0.56
ABCF1-202ENST00000376545 UBLCP1Q8WVY7 318 aaPredicted RBP11.54□□□□□ -0.56
ABCF1-202ENST00000376545 CENPTQ96BT3 561 aa11.54□□□□□ -0.56
ABCF1-202ENST00000376545 LRRC4CQ9HCJ2 640 aa11.54□□□□□ -0.56
ABCF1-202ENST00000376545 PCYOX1Q9UHG3 505 aa11.54□□□□□ -0.56
ABCF1-202ENST00000376545 CNTNAP1P78357 1384 aa11.54□□□□□ -0.56
ABCF1-202ENST00000376545 GMNCA6NCL1 334 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 EXOC3O60645 756 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 LYPLA2O95372 231 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 HSPA6P17066 643 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 ABCB4P21439 1286 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 PPP3CAQ08209 521 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 ZDHHC24Q6UX98 284 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 FAM160B2Q86V87 743 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 ARHGEF19Q8IW93 802 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 MORC4Q8TE76 937 aa11.53□□□□□ -0.56
ABCF1-202ENST00000376545 HOOK2Q96ED9 719 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms