RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 GEN1Q17RS7 908 aa17.99■□□□□ 0.47
VARS-215ENST00000375663 TUBB6Q9BUF5 446 aa17.99■□□□□ 0.47
VARS-215ENST00000375663 PACSIN1Q9BY11 444 aa17.99■□□□□ 0.47
VARS-215ENST00000375663 SLC40A1Q9NP59 571 aa17.99■□□□□ 0.47
VARS-215ENST00000375663 SCINQ9Y6U3 715 aa17.99■□□□□ 0.47
VARS-215ENST00000375663 PLEKHG2Q9H7P9 1386 aa17.99■□□□□ 0.47
VARS-215ENST00000375663 NR1H3Q13133 447 aa17.99■□□□□ 0.47
VARS-215ENST00000375663 ARHGEF1Q92888 912 aaKnown RBP17.99■□□□□ 0.47
VARS-215ENST00000375663 DUSP9Q99956 384 aaKnown RBP17.99■□□□□ 0.47
VARS-215ENST00000375663 SUCLA2Q9P2R7 463 aaPredicted RBP17.99■□□□□ 0.47
VARS-215ENST00000375663 SCOCQ9UIL1 159 aa17.99■□□□□ 0.47
VARS-215ENST00000375663 GPSM2P81274 684 aa17.99■□□□□ 0.47
VARS-215ENST00000375663 ARHGAP27Q6ZUM4 889 aa17.99■□□□□ 0.47
VARS-215ENST00000375663 TRIM42Q8IWZ5 723 aa17.99■□□□□ 0.47
VARS-215ENST00000375663 MDM1Q8TC05 714 aa17.99■□□□□ 0.47
VARS-215ENST00000375663 MIPOL1Q8TD10 442 aa17.99■□□□□ 0.47
VARS-215ENST00000375663 DDX23Q9BUQ8 820 aaKnown RBP17.99■□□□□ 0.47
VARS-215ENST00000375663 TRIM4Q9C037 500 aa17.99■□□□□ 0.47
VARS-215ENST00000375663 GINM1Q9NU53 330 aa17.99■□□□□ 0.47
VARS-215ENST00000375663 DBR1Q9UK59 544 aaKnown RBP17.99■□□□□ 0.47
VARS-215ENST00000375663 ANKRD26Q9UPS8 1709 aa17.98■□□□□ 0.47
VARS-215ENST00000375663 TJP3O95049 919 aa17.98■□□□□ 0.47
VARS-215ENST00000375663 KLRK1P26718 216 aa17.98■□□□□ 0.47
VARS-215ENST00000375663 SERPINB6P35237 376 aa17.98■□□□□ 0.47
VARS-215ENST00000375663 AARSP49588 968 aaKnown RBP eCLIP17.98■□□□□ 0.473e-8■■■■■ 29.1
VARS-215ENST00000375663 KRT17Q04695 432 aa17.98■□□□□ 0.47
VARS-215ENST00000375663 HP1BP3Q5SSJ5 553 aaPredicted RBP17.98■□□□□ 0.47
VARS-215ENST00000375663 PASD1Q8IV76 773 aa17.98■□□□□ 0.47
VARS-215ENST00000375663 INTUQ9ULD6 942 aa17.98■□□□□ 0.47
VARS-215ENST00000375663 ZSCAN5CA6NGD5 496 aaPredicted RBP17.98■□□□□ 0.47
VARS-215ENST00000375663 PHF2O75151 1096 aa17.98■□□□□ 0.47
VARS-215ENST00000375663 TMEM139Q8IV31 216 aa17.98■□□□□ 0.47
VARS-215ENST00000375663 SMC1BQ8NDV3 1235 aa17.98■□□□□ 0.47
VARS-215ENST00000375663 TPCN2Q8NHX9 752 aa17.98■□□□□ 0.47
VARS-215ENST00000375663 LXNQ9BS40 222 aa17.98■□□□□ 0.47
VARS-215ENST00000375663 YARSP54577 528 aaKnown RBP17.98■□□□□ 0.47
VARS-215ENST00000375663 PDE1BQ01064 536 aa17.98■□□□□ 0.47
VARS-215ENST00000375663 MTERF2Q49AM1 385 aa17.98■□□□□ 0.47
VARS-215ENST00000375663 SPATA21Q7Z572 469 aa17.98■□□□□ 0.47
VARS-215ENST00000375663 FAM160B2Q86V87 743 aa17.98■□□□□ 0.47
VARS-215ENST00000375663 SNF8Q96H20 258 aa17.98■□□□□ 0.47
VARS-215ENST00000375663 SLC24A3Q9HC58 644 aa17.98■□□□□ 0.47
VARS-215ENST00000375663 IPO5O00410 1097 aaKnown RBP17.97■□□□□ 0.47
VARS-215ENST00000375663 SMARCA1P28370 1054 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 KRT39Q6A163 491 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 NIM1KQ8IY84 436 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 CAVIN3Q969G5 261 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 SGSM3Q96HU1 749 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 FAM167BQ9BTA0 163 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 TRIM55Q9BYV6 548 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 BCAP29Q9UHQ4 241 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 ALG6Q9Y672 507 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.97■□□□□ 0.47
VARS-215ENST00000375663 PITPNM2Q9BZ72 1349 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 CYP26A1O43174 497 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 TFAMQ00059 246 aaKnown RBP17.97■□□□□ 0.47
VARS-215ENST00000375663 MEA1Q16626 185 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 MIS12Q9H081 205 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 NXF1Q9UBU9 619 aaKnown RBP17.97■□□□□ 0.47
VARS-215ENST00000375663 TMEM253P0C7T8 217 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 COPB2P35606 906 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 PRKG1Q13976 671 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 SLC29A2Q14542 456 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 RINT1Q6NUQ1 792 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 SYT2Q8N9I0 419 aaPredicted RBP17.97■□□□□ 0.47
VARS-215ENST00000375663 KIAA0895Q8NCT3 520 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 TLR10Q9BXR5 811 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 JMJD4Q9H9V9 463 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 DCTN4Q9UJW0 460 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 ARL2BPQ9Y2Y0 163 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 RTN2O75298 545 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 TNFAIP1Q13829 316 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 GJB7Q6PEY0 223 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 MAML1Q92585 1016 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 TTC17Q96AE7 1141 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 SAAL1Q96ER3 474 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 RBM41Q96IZ5 413 aaKnown RBP17.97■□□□□ 0.47
VARS-215ENST00000375663 DAGLAQ9Y4D2 1042 aa17.97■□□□□ 0.47
VARS-215ENST00000375663 USP15Q9Y4E8 981 aaPredicted RBP17.97■□□□□ 0.47
VARS-215ENST00000375663 CCT8L1PA6NM43 557 aa17.96■□□□□ 0.47
VARS-215ENST00000375663 PDE2AO00408 941 aaPredicted RBP17.96■□□□□ 0.47
VARS-215ENST00000375663 GYG2O15488 501 aa17.96■□□□□ 0.47
VARS-215ENST00000375663 NOL3O60936 208 aaKnown RBP17.96■□□□□ 0.47
VARS-215ENST00000375663 ELF1P32519 619 aa17.96■□□□□ 0.47
VARS-215ENST00000375663 MKRN4PQ13434 485 aaPredicted RBP17.96■□□□□ 0.47
VARS-215ENST00000375663 LONRF1Q17RB8 773 aa17.96■□□□□ 0.47
VARS-215ENST00000375663 DARS2Q6PI48 645 aaKnown RBP17.96■□□□□ 0.47
VARS-215ENST00000375663 TRPM8Q7Z2W7 1104 aa17.96■□□□□ 0.47
VARS-215ENST00000375663 CREG2Q8IUH2 290 aa17.96■□□□□ 0.47
VARS-215ENST00000375663 NRBP2Q9NSY0 501 aa17.96■□□□□ 0.47
VARS-215ENST00000375663 CLEC11AQ9Y240 323 aa17.96■□□□□ 0.47
VARS-215ENST00000375663 KCNJ1P48048 391 aa17.96■□□□□ 0.47
VARS-215ENST00000375663 MAP7Q14244 749 aa17.96■□□□□ 0.47
VARS-215ENST00000375663 CDKL2Q92772 493 aa17.96■□□□□ 0.47
VARS-215ENST00000375663 RNF34Q969K3 372 aa17.96■□□□□ 0.47
VARS-215ENST00000375663 CARD9Q9H257 536 aa17.96■□□□□ 0.47
VARS-215ENST00000375663 HESX1Q9UBX0 185 aa17.96■□□□□ 0.47
VARS-215ENST00000375663 CYP11B2P19099 503 aa17.96■□□□□ 0.47
VARS-215ENST00000375663 IZUMO3Q5VZ72 239 aa17.96■□□□□ 0.47
VARS-215ENST00000375663 MIGA2Q7L4E1 593 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms