RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 MYO5CQ9NQX4 1742 aa21.04■□□□□ 0.96
COL15A1-201ENST00000375001 FOXN1O15353 648 aa21.04■□□□□ 0.96
COL15A1-201ENST00000375001 TSPY1Q01534 308 aa21.04■□□□□ 0.96
COL15A1-201ENST00000375001 POU5F1BQ06416 359 aa21.04■□□□□ 0.96
COL15A1-201ENST00000375001 ASPRV1Q53RT3 343 aa21.04■□□□□ 0.96
COL15A1-201ENST00000375001 ARL6IP4Q66PJ3 421 aaKnown RBP21.04■□□□□ 0.96
COL15A1-201ENST00000375001 KRT39Q6A163 491 aa21.04■□□□□ 0.96
COL15A1-201ENST00000375001 RBM41Q96IZ5 413 aaKnown RBP21.04■□□□□ 0.96
COL15A1-201ENST00000375001 CHN1P15882 459 aa21.04■□□□□ 0.96
COL15A1-201ENST00000375001 SZRD1Q7Z422 152 aa21.04■□□□□ 0.96
COL15A1-201ENST00000375001 AMNQ9BXJ7 453 aa21.04■□□□□ 0.96
COL15A1-201ENST00000375001 PARVGQ9HBI0 331 aa21.04■□□□□ 0.96
COL15A1-201ENST00000375001 SLC40A1Q9NP59 571 aa21.04■□□□□ 0.96
COL15A1-201ENST00000375001 NEDD4P46934 1319 aa21.04■□□□□ 0.96
COL15A1-201ENST00000375001 INO80B-WBP1J3KQ70 363 aa21.04■□□□□ 0.96
COL15A1-201ENST00000375001 PJA2O43164 708 aa21.04■□□□□ 0.96
COL15A1-201ENST00000375001 CHRNA3P32297 505 aa21.04■□□□□ 0.96
COL15A1-201ENST00000375001 LRRC8BQ6P9F7 803 aa21.04■□□□□ 0.96
COL15A1-201ENST00000375001 RNF25Q96BH1 459 aaPredicted RBP21.04■□□□□ 0.96
COL15A1-201ENST00000375001 SEC16BQ96JE7 1060 aa21.04■□□□□ 0.96
COL15A1-201ENST00000375001 NACC1Q96RE7 527 aa21.04■□□□□ 0.96
COL15A1-201ENST00000375001 INO80BQ9C086 356 aaPredicted RBP21.04■□□□□ 0.96
COL15A1-201ENST00000375001 OLFML3Q9NRN5 406 aa21.04■□□□□ 0.96
COL15A1-201ENST00000375001 NOC2LQ9Y3T9 749 aaKnown RBP21.04■□□□□ 0.96
COL15A1-201ENST00000375001 ZSCAN20P17040 1043 aaPredicted RBP21.03■□□□□ 0.96
COL15A1-201ENST00000375001 USP17L3A6NCW0 530 aa21.03■□□□□ 0.96
COL15A1-201ENST00000375001 USP17L4A6NCW7 530 aa21.03■□□□□ 0.96
COL15A1-201ENST00000375001 S100A5P33763 92 aa21.03■□□□□ 0.96
COL15A1-201ENST00000375001 GPC5P78333 572 aa21.03■□□□□ 0.96
COL15A1-201ENST00000375001 TBCCQ15814 346 aa21.03■□□□□ 0.96
COL15A1-201ENST00000375001 USP17L1Q7RTZ2 530 aa21.03■□□□□ 0.96
COL15A1-201ENST00000375001 LARGE2Q8N3Y3 721 aa21.03■□□□□ 0.96
COL15A1-201ENST00000375001 ASPSCR1Q9BZE9 553 aa21.03■□□□□ 0.96
COL15A1-201ENST00000375001 HACD3Q9P035 362 aa21.03■□□□□ 0.96
COL15A1-201ENST00000375001 ADAM22Q9P0K1 906 aa21.03■□□□□ 0.96
COL15A1-201ENST00000375001 USP15Q9Y4E8 981 aaPredicted RBP21.03■□□□□ 0.96
COL15A1-201ENST00000375001 FAM47CQ5HY64 1035 aa21.03■□□□□ 0.96
COL15A1-201ENST00000375001 DDX42Q86XP3 938 aaKnown RBP eCLIP21.03■□□□□ 0.96
COL15A1-201ENST00000375001 DPF2Q92785 391 aa21.03■□□□□ 0.96
COL15A1-201ENST00000375001 LRRC4Q9HBW1 653 aa21.03■□□□□ 0.96
COL15A1-201ENST00000375001 H7C1W4 665 aa21.03■□□□□ 0.96
COL15A1-201ENST00000375001 PRCPP42785 496 aa21.03■□□□□ 0.96
COL15A1-201ENST00000375001 DLGAP5Q15398 846 aa21.03■□□□□ 0.96
COL15A1-201ENST00000375001 ZNF710Q8N1W2 664 aa21.03■□□□□ 0.96
COL15A1-201ENST00000375001 SYNDIG1LA6NDD5 238 aa21.02■□□□□ 0.96
COL15A1-201ENST00000375001 PAPOLAP51003 745 aaKnown RBP21.02■□□□□ 0.96
COL15A1-201ENST00000375001 MECOMQ03112 1051 aa21.02■□□□□ 0.96
COL15A1-201ENST00000375001 GPS1Q13098 491 aa21.02■□□□□ 0.96
COL15A1-201ENST00000375001 MTF1Q14872 753 aa21.02■□□□□ 0.96
COL15A1-201ENST00000375001 SMAD1Q15797 465 aaKnown RBP21.02■□□□□ 0.96
COL15A1-201ENST00000375001 ZNF579Q8NAF0 562 aaKnown RBP21.02■□□□□ 0.96
COL15A1-201ENST00000375001 SERPINB1P30740 379 aa21.02■□□□□ 0.96
COL15A1-201ENST00000375001 CCDC137Q6PK04 289 aaKnown RBP21.02■□□□□ 0.96
COL15A1-201ENST00000375001 EXOC8Q8IYI6 725 aa21.02■□□□□ 0.96
COL15A1-201ENST00000375001 SPICE1Q8N0Z3 855 aa21.02■□□□□ 0.96
COL15A1-201ENST00000375001 SCG3Q8WXD2 468 aaKnown RBP21.02■□□□□ 0.96
COL15A1-201ENST00000375001 NEUROG2Q9H2A3 272 aa21.02■□□□□ 0.96
COL15A1-201ENST00000375001 AMACRQ9UHK6 382 aa21.02■□□□□ 0.96
COL15A1-201ENST00000375001 ATP10DQ9P241 1426 aa21.02■□□□□ 0.96
COL15A1-201ENST00000375001 FAM187AA6NFU0 413 aa21.02■□□□□ 0.96
COL15A1-201ENST00000375001 CDC27P30260 824 aa21.02■□□□□ 0.96
COL15A1-201ENST00000375001 CRKLP46109 303 aaKnown RBP21.02■□□□□ 0.96
COL15A1-201ENST00000375001 TRIP10Q15642 601 aa21.02■□□□□ 0.96
COL15A1-201ENST00000375001 UBE2SQ16763 222 aa21.02■□□□□ 0.96
COL15A1-201ENST00000375001 PPP4R4Q6NUP7 873 aa21.02■□□□□ 0.96
COL15A1-201ENST00000375001 SLC7A3Q8WY07 619 aa21.02■□□□□ 0.96
COL15A1-201ENST00000375001 HEXIM2Q96MH2 286 aaKnown RBP21.02■□□□□ 0.96
COL15A1-201ENST00000375001 HEY1Q9Y5J3 304 aa21.02■□□□□ 0.96
COL15A1-201ENST00000375001 XPO1O14980 1071 aaKnown RBP21.02■□□□□ 0.96
COL15A1-201ENST00000375001 GPATCH4Q5T3I0 446 aaKnown RBP21.02■□□□□ 0.96
COL15A1-201ENST00000375001 MARCH10Q8NA82 808 aaPredicted RBP21.02■□□□□ 0.96
COL15A1-201ENST00000375001 EME1Q96AY2 570 aa21.02■□□□□ 0.96
COL15A1-201ENST00000375001 MTBPQ96DY7 904 aa21.02■□□□□ 0.96
COL15A1-201ENST00000375001 SF3B3Q15393 1217 aaKnown RBP21.01■□□□□ 0.95
COL15A1-201ENST00000375001 SHC4Q6S5L8 630 aa21.01■□□□□ 0.95
COL15A1-201ENST00000375001 TEKT4Q8WW24 435 aa21.01■□□□□ 0.95
COL15A1-201ENST00000375001 IRX2Q9BZI1 471 aaPredicted RBP21.01■□□□□ 0.95
COL15A1-201ENST00000375001 SNX2O60749 519 aa21.01■□□□□ 0.95
COL15A1-201ENST00000375001 BYSLQ13895 437 aaKnown RBP21.01■□□□□ 0.95
COL15A1-201ENST00000375001 TFDP1Q14186 410 aa21.01■□□□□ 0.95
COL15A1-201ENST00000375001 GALNT4Q8N4A0 578 aa21.01■□□□□ 0.95
COL15A1-201ENST00000375001 CALR3Q96L12 384 aaKnown RBP21.01■□□□□ 0.95
COL15A1-201ENST00000375001 SLITRK6Q9H5Y7 841 aa21.01■□□□□ 0.95
COL15A1-201ENST00000375001 SUGT1Q9Y2Z0 365 aa21.01■□□□□ 0.95
COL15A1-201ENST00000375001 KIF28PB7ZC32 967 aa21.01■□□□□ 0.95
COL15A1-201ENST00000375001 CORO7P57737 925 aa21.01■□□□□ 0.95
COL15A1-201ENST00000375001 CDV3Q9UKY7 258 aaKnown RBP21.01■□□□□ 0.95
COL15A1-201ENST00000375001 TTC26A0AVF1 554 aa21.01■□□□□ 0.95
COL15A1-201ENST00000375001 COPB2P35606 906 aa21.01■□□□□ 0.95
COL15A1-201ENST00000375001 CTCFP49711 727 aaPredicted RBP21.01■□□□□ 0.95
COL15A1-201ENST00000375001 MAP3K10Q02779 954 aa21.01■□□□□ 0.95
COL15A1-201ENST00000375001 DEPDC1Q5TB30 811 aa21.01■□□□□ 0.95
COL15A1-201ENST00000375001 USPL1Q5W0Q7 1092 aa21.01■□□□□ 0.95
COL15A1-201ENST00000375001 PPP4R3CPQ6ZMV5 832 aa21.01■□□□□ 0.95
COL15A1-201ENST00000375001 ZBTB33Q86T24 672 aa21.01■□□□□ 0.95
COL15A1-201ENST00000375001 MB21D2Q8IYB1 491 aaPredicted RBP21.01■□□□□ 0.95
COL15A1-201ENST00000375001 TEX12Q9BXU0 123 aa21.01■□□□□ 0.95
COL15A1-201ENST00000375001 VIPAS39Q9H9C1 493 aa21.01■□□□□ 0.95
COL15A1-201ENST00000375001 STMN3Q9NZ72 180 aa21.01■□□□□ 0.95
COL15A1-201ENST00000375001 PAMP19021 973 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms