RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 ELL2O00472 640 aaPredicted RBP5.85□□□□□ -1.47
USP48-202ENST00000374730 FAM153BP0C7A2 387 aa5.85□□□□□ -1.47
USP48-202ENST00000374730 HOXC9P31274 260 aa5.85□□□□□ -1.47
USP48-202ENST00000374730 AMPHP49418 695 aa5.85□□□□□ -1.47
USP48-202ENST00000374730 NFATC3Q12968 1075 aa5.85□□□□□ -1.47
USP48-202ENST00000374730 GPR19Q15760 415 aa5.85□□□□□ -1.47
USP48-202ENST00000374730 SOGA3Q5TF21 947 aa5.85□□□□□ -1.47
USP48-202ENST00000374730 MCM10Q7L590 875 aa5.85□□□□□ -1.47
USP48-202ENST00000374730 RPAP2Q8IXW5 612 aaPredicted RBP5.85□□□□□ -1.47
USP48-202ENST00000374730 ANKRD44Q8N8A2 993 aa5.85□□□□□ -1.47
USP48-202ENST00000374730 SH3RF2Q8TEC5 729 aa5.85□□□□□ -1.47
USP48-202ENST00000374730 RTF1Q92541 710 aaKnown RBP5.85□□□□□ -1.47
USP48-202ENST00000374730 FBXW5Q969U6 566 aa5.85□□□□□ -1.47
USP48-202ENST00000374730 DHRS4Q9BTZ2 278 aa5.85□□□□□ -1.47
USP48-202ENST00000374730 DCTPP1Q9H773 170 aa5.85□□□□□ -1.47
USP48-202ENST00000374730 KCND1Q9NSA2 647 aa5.85□□□□□ -1.47
USP48-202ENST00000374730 MRPS23Q9Y3D9 190 aaKnown RBP5.85□□□□□ -1.47
USP48-202ENST00000374730 ALS2Q96Q42 1657 aa5.85□□□□□ -1.47
USP48-202ENST00000374730 NPHP4O75161 1426 aaPredicted RBP5.84□□□□□ -1.47
USP48-202ENST00000374730 MST1RQ04912 1400 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 ZNF536O15090 1300 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 TCRBV5S4A2TA0A5A2 114 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 KLHL18O94889 574 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 FBXO21O94952 628 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 KNG1P01042 644 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 CKMP06732 381 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 GJA4P35212 333 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 EPHB4P54760 987 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 ADAM17P78536 824 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 GUCY1A3Q02108 690 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 FIGNQ5HY92 759 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 GLB1LQ6UWU2 654 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 KBTBD2Q8IY47 623 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 PCDH19Q8TAB3 1148 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 IGDCC4Q8TDY8 1250 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 KISS1RQ969F8 398 aaPredicted RBP5.84□□□□□ -1.47
USP48-202ENST00000374730 MKL1Q969V6 931 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 CD244Q9BZW8 370 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 SNTG2Q9NY99 539 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 ARHGAP20Q9P2F6 1191 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 TSPYL4Q9UJ04 414 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 ZFP69BQ9UJL9 534 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 ADAM29Q9UKF5 820 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 JAG2Q9Y219 1238 aa5.84□□□□□ -1.47
USP48-202ENST00000374730 ABCC6O95255 1503 aa5.84□□□□□ -1.48
USP48-202ENST00000374730 CEMIPQ8WUJ3 1361 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 CRYBG1Q9Y4K1 1723 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 ACOT7O00154 380 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 GSTA4O15217 222 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 NCLP19338 710 aaKnown RBP5.83□□□□□ -1.48
USP48-202ENST00000374730 CCT4P50991 539 aaKnown RBP5.83□□□□□ -1.48
USP48-202ENST00000374730 PFKPQ01813 784 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 KRT24Q2M2I5 525 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 ANKRD45Q5TZF3 282 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 CEP85Q6P2H3 762 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 ARHGAP36Q6ZRI8 547 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 C16orf59Q7L2K0 433 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 REXO1L1PQ8IX06 675 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 NUDT10Q8NFP7 164 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 SNX21Q969T3 373 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 NUDT11Q96G61 164 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 C1QTNF3Q9BXJ4 246 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 KRTAP3-1Q9BYR8 98 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 MYRFQ9Y2G1 1151 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 PCDHA8Q9Y5H6 950 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 AK9Q5TCS8 1911 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 RGPD5Q99666 1765 aa5.83□□□□□ -1.48
USP48-202ENST00000374730 FAM221BA6H8Z2 402 aa5.82□□□□□ -1.48
USP48-202ENST00000374730 EFCAB14O75071 495 aa5.82□□□□□ -1.48
USP48-202ENST00000374730 HMMRO75330 724 aa5.82□□□□□ -1.48
USP48-202ENST00000374730 CDC45O75419 566 aa5.82□□□□□ -1.48
USP48-202ENST00000374730 PTPN1P18031 435 aaKnown RBP5.82□□□□□ -1.48
USP48-202ENST00000374730 PPP2CBP62714 309 aa5.82□□□□□ -1.48
USP48-202ENST00000374730 PPP2CAP67775 309 aa5.82□□□□□ -1.48
USP48-202ENST00000374730 DBPQ10586 325 aaPredicted RBP5.82□□□□□ -1.48
USP48-202ENST00000374730 FAM47CQ5HY64 1035 aa5.82□□□□□ -1.48
USP48-202ENST00000374730 TTC22Q5TAA0 569 aa5.82□□□□□ -1.48
USP48-202ENST00000374730 ARHGEF18Q6ZSZ5 1173 aa5.82□□□□□ -1.48
USP48-202ENST00000374730 Q6ZUG5 572 aa5.82□□□□□ -1.48
USP48-202ENST00000374730 JMYQ8N9B5 988 aa5.82□□□□□ -1.48
USP48-202ENST00000374730 KCNH5Q8NCM2 988 aa5.82□□□□□ -1.48
USP48-202ENST00000374730 IP6K1Q92551 441 aa5.82□□□□□ -1.48
USP48-202ENST00000374730 AJUBAQ96IF1 538 aa5.82□□□□□ -1.48
USP48-202ENST00000374730 LOXL4Q96JB6 756 aa5.82□□□□□ -1.48
USP48-202ENST00000374730 CATSPERZQ9NTU4 200 aa5.82□□□□□ -1.48
USP48-202ENST00000374730 PPP4R1LQ9P1A2 415 aa5.82□□□□□ -1.48
USP48-202ENST00000374730 SCN11AQ9UI33 1791 aa5.82□□□□□ -1.48
USP48-202ENST00000374730 PLEKHG2Q9H7P9 1386 aa5.81□□□□□ -1.48
USP48-202ENST00000374730 CCDC163A0A0D9SF12 145 aa5.81□□□□□ -1.48
USP48-202ENST00000374730 ZNF561-AS1K7EIQ3 104 aa5.81□□□□□ -1.48
USP48-202ENST00000374730 MAN2B1O00754 1011 aa5.81□□□□□ -1.48
USP48-202ENST00000374730 FRAT2O75474 233 aaPredicted RBP5.81□□□□□ -1.48
USP48-202ENST00000374730 AMY2AP04746 511 aa5.81□□□□□ -1.48
USP48-202ENST00000374730 HOXB7P09629 217 aa5.81□□□□□ -1.48
USP48-202ENST00000374730 PYGMP11217 842 aa5.81□□□□□ -1.48
USP48-202ENST00000374730 GSPT1P15170 499 aaKnown RBP5.81□□□□□ -1.48
USP48-202ENST00000374730 PDE6AP16499 860 aa5.81□□□□□ -1.48
USP48-202ENST00000374730 AMY2BP19961 511 aa5.81□□□□□ -1.48
USP48-202ENST00000374730 ZXDCQ2QGD7 858 aaPredicted RBP5.81□□□□□ -1.48
USP48-202ENST00000374730 TRIM61Q5EBN2 209 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms