RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 TAP1Q03518 808 aa20.29■□□□□ 0.84
PBX3-205ENST00000373492 POU5F1BQ06416 359 aa20.29■□□□□ 0.84
PBX3-205ENST00000373492 SRGAP1Q7Z6B7 1085 aa20.29■□□□□ 0.84
PBX3-205ENST00000373492 RTN4RL1Q86UN2 441 aaPredicted RBP20.29■□□□□ 0.84
PBX3-205ENST00000373492 FAM228AQ86W67 206 aa20.29■□□□□ 0.84
PBX3-205ENST00000373492 ASAP3Q8TDY4 903 aa20.29■□□□□ 0.84
PBX3-205ENST00000373492 LRRC15Q8TF66 581 aa20.29■□□□□ 0.84
PBX3-205ENST00000373492 TMX1Q9H3N1 280 aa20.29■□□□□ 0.84
PBX3-205ENST00000373492 A0A1W2PQ27 194 aa20.28■□□□□ 0.84
PBX3-205ENST00000373492 A0A1W2PQ64 194 aa20.28■□□□□ 0.84
PBX3-205ENST00000373492 A0A1W2PQD8 194 aa20.28■□□□□ 0.84
PBX3-205ENST00000373492 LRRIQ4A6NIV6 560 aa20.28■□□□□ 0.84
PBX3-205ENST00000373492 POLR2DO15514 142 aaKnown RBP20.28■□□□□ 0.84
PBX3-205ENST00000373492 UPP2O95045 317 aa20.28■□□□□ 0.84
PBX3-205ENST00000373492 SFPQP23246 707 aaKnown RBP eCLIP20.28■□□□□ 0.84
PBX3-205ENST00000373492 RAD51AP2Q09MP3 1159 aa20.28■□□□□ 0.84
PBX3-205ENST00000373492 CAPSQ13938 189 aa20.28■□□□□ 0.84
PBX3-205ENST00000373492 TPRNQ4KMQ1 711 aa20.28■□□□□ 0.84
PBX3-205ENST00000373492 NAALADL2Q58DX5 795 aa20.28■□□□□ 0.84
PBX3-205ENST00000373492 SP7Q8TDD2 431 aaPredicted RBP20.28■□□□□ 0.84
PBX3-205ENST00000373492 LINC01599Q8WXQ3 324 aa20.28■□□□□ 0.84
PBX3-205ENST00000373492 MYLIPQ8WY64 445 aa20.28■□□□□ 0.84
PBX3-205ENST00000373492 DHX58Q96C10 678 aa20.28■□□□□ 0.84
PBX3-205ENST00000373492 LRRC27Q9C0I9 530 aa20.28■□□□□ 0.84
PBX3-205ENST00000373492 C17orf75Q9HAS0 396 aa20.28■□□□□ 0.84
PBX3-205ENST00000373492 IFT122Q9HBG6 1241 aa20.28■□□□□ 0.84
PBX3-205ENST00000373492 KCNG1Q9UIX4 513 aa20.28■□□□□ 0.84
PBX3-205ENST00000373492 KCNH3Q9ULD8 1083 aa20.28■□□□□ 0.84
PBX3-205ENST00000373492 ODF2LQ9ULJ1 636 aa20.28■□□□□ 0.84
PBX3-205ENST00000373492 A0A1B0GVL5 298 aa20.27■□□□□ 0.84
PBX3-205ENST00000373492 LCHNA4D1U4 455 aa20.27■□□□□ 0.84
PBX3-205ENST00000373492 NAMPTP43490 491 aa20.27■□□□□ 0.84
PBX3-205ENST00000373492 PTENP60484 403 aa20.27■□□□□ 0.84
PBX3-205ENST00000373492 ZBTB8OSQ8IWT0 167 aa20.27■□□□□ 0.84
PBX3-205ENST00000373492 YME1L1Q96TA2 773 aa20.27■□□□□ 0.84
PBX3-205ENST00000373492 NFKBIZQ9BYH8 718 aa20.27■□□□□ 0.84
PBX3-205ENST00000373492 PRDM12Q9H4Q4 367 aa20.27■□□□□ 0.84
PBX3-205ENST00000373492 MAGEF1Q9HAY2 307 aa20.27■□□□□ 0.84
PBX3-205ENST00000373492 C1orf112Q9NSG2 853 aa20.27■□□□□ 0.84
PBX3-205ENST00000373492 RNF216Q9NWF9 866 aaPredicted RBP20.27■□□□□ 0.84
PBX3-205ENST00000373492 CHD9Q3L8U1 2897 aa20.27■□□□□ 0.83
PBX3-205ENST00000373492 FNDC1Q4ZHG4 1894 aaPredicted RBP20.26■□□□□ 0.83
PBX3-205ENST00000373492 NLRC5Q86WI3 1866 aa20.26■□□□□ 0.83
PBX3-205ENST00000373492 ARHGEF15O94989 841 aa20.26■□□□□ 0.83
PBX3-205ENST00000373492 FOSL2P15408 326 aa20.26■□□□□ 0.83
PBX3-205ENST00000373492 PFKFB1P16118 471 aa20.26■□□□□ 0.83
PBX3-205ENST00000373492 AMPD3Q01432 767 aa20.26■□□□□ 0.83
PBX3-205ENST00000373492 DMP1Q13316 513 aaPredicted RBP20.26■□□□□ 0.83
PBX3-205ENST00000373492 E2F4Q16254 413 aa20.26■□□□□ 0.83
PBX3-205ENST00000373492 ARSHQ5FYA8 562 aa20.26■□□□□ 0.83
PBX3-205ENST00000373492 CATSPER4Q7RTX7 472 aa20.26■□□□□ 0.83
PBX3-205ENST00000373492 NPAS4Q8IUM7 802 aa20.26■□□□□ 0.83
PBX3-205ENST00000373492 CEP57L1Q8IYX8 460 aa20.26■□□□□ 0.83
PBX3-205ENST00000373492 CRIPAKQ8N1N5 446 aa20.26■□□□□ 0.83
PBX3-205ENST00000373492 DEPTORQ8TB45 409 aa20.26■□□□□ 0.83
PBX3-205ENST00000373492 MRPS27Q92552 414 aaKnown RBP20.26■□□□□ 0.83
PBX3-205ENST00000373492 GAS2L1Q99501 681 aaPredicted RBP20.26■□□□□ 0.83
PBX3-205ENST00000373492 C2orf40Q9H1Z8 148 aa20.26■□□□□ 0.83
PBX3-205ENST00000373492 POLD4Q9HCU8 107 aa20.26■□□□□ 0.83
PBX3-205ENST00000373492 RGS18Q9NS28 235 aa20.26■□□□□ 0.83
PBX3-205ENST00000373492 LARSQ9P2J5 1176 aaKnown RBP20.26■□□□□ 0.83
PBX3-205ENST00000373492 NPHP3-ACAD11A0A0J9YXS1 232 aa20.25■□□□□ 0.83
PBX3-205ENST00000373492 DENND3A2RUS2 1198 aa20.25■□□□□ 0.83
PBX3-205ENST00000373492 LINC01553A4QN01 128 aa20.25■□□□□ 0.83
PBX3-205ENST00000373492 INO80B-WBP1J3KQ70 363 aa20.25■□□□□ 0.83
PBX3-205ENST00000373492 TBCAO75347 108 aaKnown RBP20.25■□□□□ 0.83
PBX3-205ENST00000373492 ERLIN2O94905 339 aa20.25■□□□□ 0.83
PBX3-205ENST00000373492 FAM13AO94988 1023 aa20.25■□□□□ 0.83
PBX3-205ENST00000373492 STAG3L1P0CL83 205 aa20.25■□□□□ 0.83
PBX3-205ENST00000373492 ZSCAN20P17040 1043 aaPredicted RBP20.25■□□□□ 0.83
PBX3-205ENST00000373492 SARSP49591 514 aaKnown RBP20.25■□□□□ 0.83
PBX3-205ENST00000373492 PEX3P56589 373 aa20.25■□□□□ 0.83
PBX3-205ENST00000373492 PCBP1Q15365 356 aaKnown RBP eCLIP20.25■□□□□ 0.83
PBX3-205ENST00000373492 SLC24A5Q71RS6 500 aa20.25■□□□□ 0.83
PBX3-205ENST00000373492 IFNLR1Q8IU57 520 aaPredicted RBP20.25■□□□□ 0.83
PBX3-205ENST00000373492 FSIP1Q8NA03 581 aa20.25■□□□□ 0.83
PBX3-205ENST00000373492 BSNDQ8WZ55 320 aa20.25■□□□□ 0.83
PBX3-205ENST00000373492 TGS1Q96RS0 853 aaKnown RBP20.25■□□□□ 0.83
PBX3-205ENST00000373492 ADAM2Q99965 735 aa20.25■□□□□ 0.83
PBX3-205ENST00000373492 REEP2Q9BRK0 252 aa20.25■□□□□ 0.83
PBX3-205ENST00000373492 TNMDQ9H2S6 317 aa20.25■□□□□ 0.83
PBX3-205ENST00000373492 USP25Q9UHP3 1055 aa20.25■□□□□ 0.83
PBX3-205ENST00000373492 MYO9BQ13459 2157 aa20.24■□□□□ 0.83
PBX3-205ENST00000373492 TDRD15B5MCY1 1934 aaKnown RBP20.24■□□□□ 0.83
PBX3-205ENST00000373492 CCDC169A6NNP5 214 aa20.24■□□□□ 0.83
PBX3-205ENST00000373492 MGEA5O60502 916 aa20.24■□□□□ 0.83
PBX3-205ENST00000373492 CSDE1O75534 798 aaKnown RBP20.24■□□□□ 0.83
PBX3-205ENST00000373492 FGFR4P22455 802 aa20.24■□□□□ 0.83
PBX3-205ENST00000373492 SYKP43405 635 aa20.24■□□□□ 0.83
PBX3-205ENST00000373492 SMTNP53814 917 aa20.24■□□□□ 0.83
PBX3-205ENST00000373492 ERVK-21P61565 698 aa20.24■□□□□ 0.83
PBX3-205ENST00000373492 CACNB1Q02641 598 aaPredicted RBP20.24■□□□□ 0.83
PBX3-205ENST00000373492 NCBP1Q09161 790 aaKnown RBP20.24■□□□□ 0.83
PBX3-205ENST00000373492 MAPK7Q13164 816 aa20.24■□□□□ 0.83
PBX3-205ENST00000373492 GIT2Q14161 759 aa20.24■□□□□ 0.83
PBX3-205ENST00000373492 DSC3Q14574 896 aa20.24■□□□□ 0.83
PBX3-205ENST00000373492 DYMQ7RTS9 669 aa20.24■□□□□ 0.83
PBX3-205ENST00000373492 DAW1Q8N136 415 aa20.24■□□□□ 0.83
PBX3-205ENST00000373492 DDX12PQ92771 950 aa20.24■□□□□ 0.83
PBX3-205ENST00000373492 KMT5AQ9NQR1 393 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms