RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 NEUROG2Q9H2A3 272 aa25.86■■□□□ 1.73
CDK9-201ENST00000373264 PPP2R5AQ15172 486 aa25.85■■□□□ 1.73
CDK9-201ENST00000373264 DCAF12L1Q5VU92 463 aa25.85■■□□□ 1.73
CDK9-201ENST00000373264 PRAMEF18Q5VWM3 479 aa25.85■■□□□ 1.73
CDK9-201ENST00000373264 PCNX4Q63HM2 1172 aa25.85■■□□□ 1.73
CDK9-201ENST00000373264 FAM76AQ8TAV0 307 aa25.85■■□□□ 1.73
CDK9-201ENST00000373264 LARSQ9P2J5 1176 aaKnown RBP25.85■■□□□ 1.73
CDK9-201ENST00000373264 ZNF233A6NK53 670 aa25.85■■□□□ 1.73
CDK9-201ENST00000373264 VCAM1P19320 739 aa25.85■■□□□ 1.73
CDK9-201ENST00000373264 ECHS1P30084 290 aa25.85■■□□□ 1.73
CDK9-201ENST00000373264 SAMD7Q7Z3H4 446 aa25.85■■□□□ 1.73
CDK9-201ENST00000373264 HAUS6Q7Z4H7 955 aa25.85■■□□□ 1.73
CDK9-201ENST00000373264 CELF4Q9BZC1 486 aaKnown RBP25.85■■□□□ 1.73
CDK9-201ENST00000373264 HSPBP1Q9NZL4 362 aa25.85■■□□□ 1.73
CDK9-201ENST00000373264 AMACRQ9UHK6 382 aa25.85■■□□□ 1.73
CDK9-201ENST00000373264 TESPA1A2RU30 521 aaPredicted RBP25.84■■□□□ 1.73
CDK9-201ENST00000373264 SART1O43290 800 aaKnown RBP25.84■■□□□ 1.73
CDK9-201ENST00000373264 ADRB2P07550 413 aa25.84■■□□□ 1.73
CDK9-201ENST00000373264 VAMP7P51809 220 aa25.84■■□□□ 1.73
CDK9-201ENST00000373264 TNNC1P63316 161 aa25.84■■□□□ 1.73
CDK9-201ENST00000373264 PAK2Q13177 524 aa25.84■■□□□ 1.73
CDK9-201ENST00000373264 TAF3Q5VWG9 929 aa25.84■■□□□ 1.73
CDK9-201ENST00000373264 SLC9A9Q8IVB4 645 aa25.84■■□□□ 1.73
CDK9-201ENST00000373264 ACTRT1Q8TDG2 376 aa25.84■■□□□ 1.73
CDK9-201ENST00000373264 PGRMC1O00264 195 aaKnown RBP25.83■■□□□ 1.73
CDK9-201ENST00000373264 WDR46O15213 610 aaKnown RBP25.83■■□□□ 1.73
CDK9-201ENST00000373264 HSF2BPO75031 334 aa25.83■■□□□ 1.73
CDK9-201ENST00000373264 PLS3P13797 630 aa25.83■■□□□ 1.73
CDK9-201ENST00000373264 IFI16Q16666 785 aaKnown RBP25.83■■□□□ 1.73
CDK9-201ENST00000373264 AADACL2Q6P093 401 aa25.83■■□□□ 1.73
CDK9-201ENST00000373264 SAAL1Q96ER3 474 aa25.83■■□□□ 1.73
CDK9-201ENST00000373264 PBKQ96KB5 322 aa25.83■■□□□ 1.73
CDK9-201ENST00000373264 POP1Q99575 1024 aaKnown RBP25.83■■□□□ 1.73
CDK9-201ENST00000373264 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.83■■□□□ 1.732e-7■■■□□ 14.8
CDK9-201ENST00000373264 ANKRD65E5RJM6 399 aa25.83■■□□□ 1.73
CDK9-201ENST00000373264 KRIT1O00522 736 aa25.83■■□□□ 1.73
CDK9-201ENST00000373264 TNFAIP3P21580 790 aa25.83■■□□□ 1.73
CDK9-201ENST00000373264 USP8P40818 1118 aa25.83■■□□□ 1.73
CDK9-201ENST00000373264 ZNF211Q13398 564 aaPredicted RBP25.83■■□□□ 1.73
CDK9-201ENST00000373264 FAM102BQ5T8I3 360 aa25.83■■□□□ 1.73
CDK9-201ENST00000373264 HES6Q96HZ4 224 aa25.83■■□□□ 1.73
CDK9-201ENST00000373264 RMDN3Q96TC7 470 aa25.83■■□□□ 1.73
CDK9-201ENST00000373264 ANKRD63C9JTQ0 380 aa25.82■■□□□ 1.72
CDK9-201ENST00000373264 KRT13P13646 458 aa25.82■■□□□ 1.72
CDK9-201ENST00000373264 LMNB1P20700 586 aa25.82■■□□□ 1.72
CDK9-201ENST00000373264 HLTFQ14527 1009 aaKnown RBP eCLIP25.82■■□□□ 1.72
CDK9-201ENST00000373264 CBWD2Q8IUF1 395 aa25.82■■□□□ 1.72
CDK9-201ENST00000373264 IQCKQ8N0W5 287 aa25.82■■□□□ 1.72
CDK9-201ENST00000373264 RPAP3Q9H6T3 665 aaPredicted RBP25.82■■□□□ 1.72
CDK9-201ENST00000373264 SUCLA2Q9P2R7 463 aaPredicted RBP25.82■■□□□ 1.72
CDK9-201ENST00000373264 A0A0A6YYK5 440 aaPredicted RBP25.82■■□□□ 1.72
CDK9-201ENST00000373264 FLT3P36888 993 aa25.82■■□□□ 1.72
CDK9-201ENST00000373264 CIAPIN1Q6FI81 312 aa25.82■■□□□ 1.72
CDK9-201ENST00000373264 ATG4CQ96DT6 458 aa25.82■■□□□ 1.72
CDK9-201ENST00000373264 TNIP1Q15025 636 aa25.81■■□□□ 1.72
CDK9-201ENST00000373264 NEK9Q8TD19 979 aa25.81■■□□□ 1.72
CDK9-201ENST00000373264 RFFLQ8WZ73 363 aa25.81■■□□□ 1.72
CDK9-201ENST00000373264 ACCSQ96QU6 501 aa25.81■■□□□ 1.72
CDK9-201ENST00000373264 TMEM253P0C7T8 217 aa25.81■■□□□ 1.72
CDK9-201ENST00000373264 ADSSP30520 456 aa25.81■■□□□ 1.72
CDK9-201ENST00000373264 SP4Q02446 784 aa25.81■■□□□ 1.72
CDK9-201ENST00000373264 PPATQ06203 517 aa25.81■■□□□ 1.72
CDK9-201ENST00000373264 PRPF4BQ13523 1007 aaKnown RBP25.81■■□□□ 1.72
CDK9-201ENST00000373264 XKR9Q5GH70 373 aa25.81■■□□□ 1.72
CDK9-201ENST00000373264 MCF2L2Q86YR7 1114 aa25.81■■□□□ 1.72
CDK9-201ENST00000373264 TEX2Q8IWB9 1127 aa25.81■■□□□ 1.72
CDK9-201ENST00000373264 CTNNBL1Q8WYA6 563 aaPredicted RBP25.81■■□□□ 1.72
CDK9-201ENST00000373264 PDCD2LQ9BRP1 358 aa25.81■■□□□ 1.72
CDK9-201ENST00000373264 KIAA1683Q9H0B3 1180 aa25.81■■□□□ 1.72
CDK9-201ENST00000373264 DBR1Q9UK59 544 aaKnown RBP25.81■■□□□ 1.72
CDK9-201ENST00000373264 DDX3YO15523 660 aaKnown RBP25.8■■□□□ 1.72
CDK9-201ENST00000373264 ATMINO43313 823 aaPredicted RBP25.8■■□□□ 1.72
CDK9-201ENST00000373264 FGGP02679 453 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 ANXA13P27216 316 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 CPNE8Q86YQ8 564 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 CCDC127Q96BQ5 260 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 RUFY1Q96T51 708 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 AGPAT1Q99943 283 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 TOPORSQ9NS56 1045 aaPredicted RBP25.8■■□□□ 1.72
CDK9-201ENST00000373264 INTUQ9ULD6 942 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 CES2O00748 559 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 TTI1O43156 1089 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 CALCAP01258 141 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 MAP2K1Q02750 393 aaPredicted RBP25.8■■□□□ 1.72
CDK9-201ENST00000373264 KIF22Q14807 665 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 CFAP58Q5T655 872 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 NBPF12Q5TAG4 269 aaPredicted RBP25.8■■□□□ 1.72
CDK9-201ENST00000373264 OR2W6PQ8NHA6 318 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 BSNDQ8WZ55 320 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 SEMA4DQ92854 862 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 TMEM117Q9H0C3 514 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 TMOD4Q9NZQ9 345 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 RSPH14Q9UHP6 348 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 AMFRQ9UKV5 643 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 NCANO14594 1321 aa25.8■■□□□ 1.72
CDK9-201ENST00000373264 CCDC169A6NNP5 214 aa25.79■■□□□ 1.72
CDK9-201ENST00000373264 SGPL1O95470 568 aa25.79■■□□□ 1.72
CDK9-201ENST00000373264 ATP1A2P50993 1020 aa25.79■■□□□ 1.72
CDK9-201ENST00000373264 BAATQ14032 418 aaPredicted RBP25.79■■□□□ 1.72
CDK9-201ENST00000373264 EPC2Q52LR7 807 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms