RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 ATP5DP30049 168 aa19.71■□□□□ 0.75
MMP9-201ENST00000372330 SFSWAPQ12872 951 aaKnown RBP19.71■□□□□ 0.75
MMP9-201ENST00000372330 AUHQ13825 339 aaKnown RBP19.71■□□□□ 0.75
MMP9-201ENST00000372330 ACBD5Q5T8D3 534 aaPredicted RBP19.71■□□□□ 0.75
MMP9-201ENST00000372330 FAM13CQ8NE31 585 aa19.71■□□□□ 0.75
MMP9-201ENST00000372330 TPCN2Q8NHX9 752 aa19.71■□□□□ 0.75
MMP9-201ENST00000372330 DDX23Q9BUQ8 820 aaKnown RBP19.71■□□□□ 0.75
MMP9-201ENST00000372330 SEC63Q9UGP8 760 aaKnown RBP19.71■□□□□ 0.75
MMP9-201ENST00000372330 BLOC1S6Q9UL45 172 aa19.71■□□□□ 0.75
MMP9-201ENST00000372330 G3BP2Q9UN86 482 aaKnown RBP19.71■□□□□ 0.75
MMP9-201ENST00000372330 PP2D1A8MPX8 630 aa19.71■□□□□ 0.75
MMP9-201ENST00000372330 NPEPPSP55786 919 aa19.71■□□□□ 0.75
MMP9-201ENST00000372330 POLR2FP61218 127 aaKnown RBP19.71■□□□□ 0.75
MMP9-201ENST00000372330 OCRLQ01968 901 aa19.71■□□□□ 0.75
MMP9-201ENST00000372330 ASIC2Q16515 512 aa19.71■□□□□ 0.75
MMP9-201ENST00000372330 PROM2Q8N271 834 aa19.71■□□□□ 0.75
MMP9-201ENST00000372330 SLC17A8Q8NDX2 589 aa19.71■□□□□ 0.75
MMP9-201ENST00000372330 RUNDC3BQ96NL0 473 aa19.71■□□□□ 0.75
MMP9-201ENST00000372330 CCDC113Q9H0I3 377 aa19.71■□□□□ 0.75
MMP9-201ENST00000372330 RIC8AQ9NPQ8 531 aa19.71■□□□□ 0.75
MMP9-201ENST00000372330 SH3GLB2Q9NR46 395 aa19.71■□□□□ 0.75
MMP9-201ENST00000372330 USP40Q9NVE5 1235 aa19.71■□□□□ 0.75
MMP9-201ENST00000372330 DNAAF2Q9NVR5 837 aaKnown RBP19.71■□□□□ 0.75
MMP9-201ENST00000372330 MTRF1LQ9UGC7 380 aaKnown RBP19.71■□□□□ 0.75
MMP9-201ENST00000372330 RASAL2Q9UJF2 1139 aa19.71■□□□□ 0.75
MMP9-201ENST00000372330 USP20Q9Y2K6 914 aa19.71■□□□□ 0.75
MMP9-201ENST00000372330 STXBP5LQ9Y2K9 1186 aa19.71■□□□□ 0.75
MMP9-201ENST00000372330 SMIM23A6NLE4 172 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 TULP1O00294 542 aaPredicted RBP19.7■□□□□ 0.74
MMP9-201ENST00000372330 GRIK5Q16478 980 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 FAM196AQ6ZSG2 479 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 EXOC3L1Q86VI1 746 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 BLIDQ8IZY5 108 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 LZICQ8WZA0 190 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 NCSTNQ92542 709 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 RMDN2Q96LZ7 410 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 GPR101Q96P66 508 aaPredicted RBP19.7■□□□□ 0.74
MMP9-201ENST00000372330 GBP5Q96PP8 586 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 PLIN2Q99541 437 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 TSG101Q99816 390 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 TRIM31Q9BZY9 425 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 TRPC5Q9UL62 973 aaPredicted RBP19.7■□□□□ 0.74
MMP9-201ENST00000372330 ROBO3Q96MS0 1386 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 A0A0A6YYK5 440 aaPredicted RBP19.7■□□□□ 0.74
MMP9-201ENST00000372330 PVALEFA0A1B0GWK0 134 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 ECE2O60344 883 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 PLCG1P19174 1290 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 ANXA13P27216 316 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 GSTT1P30711 240 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 RFC4P35249 363 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 PLTPP55058 493 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 MYBPC3Q14896 1274 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 KIAA1755Q5JYT7 1200 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 INTS8Q75QN2 995 aaKnown RBP19.7■□□□□ 0.74
MMP9-201ENST00000372330 CABP7Q86V35 215 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 DYNLL2Q96FJ2 89 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 TRIM51Q9BSJ1 452 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 LRRC4BQ9NT99 713 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 GMEB1Q9Y692 573 aa19.7■□□□□ 0.74
MMP9-201ENST00000372330 POTEFA5A3E0 1075 aa19.69■□□□□ 0.74
MMP9-201ENST00000372330 POTEIP0CG38 1075 aa19.69■□□□□ 0.74
MMP9-201ENST00000372330 POTEJP0CG39 1038 aa19.69■□□□□ 0.74
MMP9-201ENST00000372330 TPP2P29144 1249 aaPredicted RBP19.69■□□□□ 0.74
MMP9-201ENST00000372330 GRAPQ13588 217 aa19.69■□□□□ 0.74
MMP9-201ENST00000372330 RAPGEF1Q13905 1077 aa19.69■□□□□ 0.74
MMP9-201ENST00000372330 DBN1Q16643 649 aa19.69■□□□□ 0.74
MMP9-201ENST00000372330 TRAPPC3LQ5T215 181 aa19.69■□□□□ 0.74
MMP9-201ENST00000372330 POTEEQ6S8J3 1075 aa19.69■□□□□ 0.74
MMP9-201ENST00000372330 VSIG1Q86XK7 387 aa19.69■□□□□ 0.74
MMP9-201ENST00000372330 GRAPLQ8TC17 118 aaPredicted RBP19.69■□□□□ 0.74
MMP9-201ENST00000372330 SH3RF3Q8TEJ3 882 aaPredicted RBP19.69■□□□□ 0.74
MMP9-201ENST00000372330 AZIN2Q96A70 460 aa19.69■□□□□ 0.74
MMP9-201ENST00000372330 HES6Q96HZ4 224 aa19.69■□□□□ 0.74
MMP9-201ENST00000372330 MKNK2Q9HBH9 465 aa19.69■□□□□ 0.74
MMP9-201ENST00000372330 LARSQ9P2J5 1176 aaKnown RBP19.69■□□□□ 0.74
MMP9-201ENST00000372330 CACNA2D1P54289 1103 aa19.69■□□□□ 0.74
MMP9-201ENST00000372330 KPNB1Q14974 876 aaKnown RBP19.69■□□□□ 0.74
MMP9-201ENST00000372330 MTFR1Q15390 333 aa19.69■□□□□ 0.74
MMP9-201ENST00000372330 FOXB2Q5VYV0 432 aa19.69■□□□□ 0.74
MMP9-201ENST00000372330 LRRC55Q6ZSA7 311 aa19.69■□□□□ 0.74
MMP9-201ENST00000372330 GPKOWQ92917 476 aaPredicted RBP eCLIP19.69■□□□□ 0.74
MMP9-201ENST00000372330 PCDHA4Q9UN74 947 aa19.69■□□□□ 0.74
MMP9-201ENST00000372330 RPTORQ8N122 1335 aa19.68■□□□□ 0.74
MMP9-201ENST00000372330 TMEM120BA0PK00 339 aa19.68■□□□□ 0.74
MMP9-201ENST00000372330 SIGLEC16A6NMB1 481 aa19.68■□□□□ 0.74
MMP9-201ENST00000372330 GM2AP17900 193 aa19.68■□□□□ 0.74
MMP9-201ENST00000372330 GSTO1P78417 241 aa19.68■□□□□ 0.74
MMP9-201ENST00000372330 GRM4Q14833 912 aa19.68■□□□□ 0.74
MMP9-201ENST00000372330 SPDYAQ5MJ70 313 aa19.68■□□□□ 0.74
MMP9-201ENST00000372330 LRRC8CQ8TDW0 803 aa19.68■□□□□ 0.74
MMP9-201ENST00000372330 MMADHCQ9H3L0 296 aaPredicted RBP19.68■□□□□ 0.74
MMP9-201ENST00000372330 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.68■□□□□ 0.74
MMP9-201ENST00000372330 FAM205AQ6ZU69 1335 aa19.68■□□□□ 0.74
MMP9-201ENST00000372330 FGGP02679 453 aa19.68■□□□□ 0.74
MMP9-201ENST00000372330 RARGP13631 454 aa19.68■□□□□ 0.74
MMP9-201ENST00000372330 NFIXQ14938 502 aa19.68■□□□□ 0.74
MMP9-201ENST00000372330 GSTA3Q16772 222 aa19.68■□□□□ 0.74
MMP9-201ENST00000372330 ECHDC2Q86YB7 292 aa19.68■□□□□ 0.74
MMP9-201ENST00000372330 EPS8L3Q8TE67 593 aaKnown RBP19.68■□□□□ 0.74
MMP9-201ENST00000372330 LSM14BQ9BX40 385 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms