RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 KRT37O76014 449 aa25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 SURF1Q15526 300 aa25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 ARL8AQ96BM9 186 aa25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 FSD1LQ9BXM9 530 aa25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 TMEM60Q9H2L4 133 aa25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 GMNCA6NCL1 334 aa25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 GNA15P30679 374 aa25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 MMS22LQ6ZRQ5 1243 aa25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 TTC1Q99614 292 aa25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 CYP4F11Q9HBI6 524 aa25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 GUCY1A3Q02108 690 aa25.51■■□□□ 1.67
RAPGEF1-203ENST00000372195 AP3B2Q13367 1082 aa25.51■■□□□ 1.67
RAPGEF1-203ENST00000372195 NCAPHQ15003 741 aa25.51■■□□□ 1.67
RAPGEF1-203ENST00000372195 IPO5O00410 1097 aaKnown RBP25.51■■□□□ 1.67
RAPGEF1-203ENST00000372195 CYP27B1O15528 508 aa25.51■■□□□ 1.67
RAPGEF1-203ENST00000372195 DIAPH2O60879 1101 aa25.51■■□□□ 1.67
RAPGEF1-203ENST00000372195 JAK3P52333 1124 aa25.51■■□□□ 1.67
RAPGEF1-203ENST00000372195 ANKMY2Q8IV38 441 aa25.51■■□□□ 1.67
RAPGEF1-203ENST00000372195 SMIM5Q71RC9 77 aa25.51■■□□□ 1.67
RAPGEF1-203ENST00000372195 GLYCTKQ8IVS8 523 aa25.51■■□□□ 1.67
RAPGEF1-203ENST00000372195 RBM41Q96IZ5 413 aaKnown RBP25.51■■□□□ 1.67
RAPGEF1-203ENST00000372195 POLIQ9UNA4 740 aa25.51■■□□□ 1.67
RAPGEF1-203ENST00000372195 TAC1P20366 129 aa25.51■■□□□ 1.67
RAPGEF1-203ENST00000372195 ADORA2BP29275 332 aa25.51■■□□□ 1.67
RAPGEF1-203ENST00000372195 KCNA1Q09470 495 aa25.51■■□□□ 1.67
RAPGEF1-203ENST00000372195 SCARF1Q14162 830 aa25.51■■□□□ 1.67
RAPGEF1-203ENST00000372195 ANKRD40Q6AI12 368 aa25.51■■□□□ 1.67
RAPGEF1-203ENST00000372195 KCNF1Q9H3M0 494 aa25.51■■□□□ 1.67
RAPGEF1-203ENST00000372195 DNAJC8O75937 253 aaPredicted RBP25.5■■□□□ 1.67
RAPGEF1-203ENST00000372195 CCNYL1Q8N7R7 359 aa25.5■■□□□ 1.67
RAPGEF1-203ENST00000372195 PSPC1Q8WXF1 523 aaKnown RBP25.5■■□□□ 1.67
RAPGEF1-203ENST00000372195 CHEK2O96017 543 aa25.5■■□□□ 1.67
RAPGEF1-203ENST00000372195 DRP2Q13474 957 aa25.5■■□□□ 1.67
RAPGEF1-203ENST00000372195 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.5■■□□□ 1.677e-7■■■□□ 18.6
RAPGEF1-203ENST00000372195 ASNSD1Q9NWL6 643 aa25.5■■□□□ 1.67
RAPGEF1-203ENST00000372195 NPR1P16066 1061 aa25.5■■□□□ 1.67
RAPGEF1-203ENST00000372195 MDM2Q00987 491 aaPredicted RBP25.5■■□□□ 1.67
RAPGEF1-203ENST00000372195 GRM4Q14833 912 aa25.5■■□□□ 1.67
RAPGEF1-203ENST00000372195 SCN4BQ8IWT1 228 aa25.5■■□□□ 1.67
RAPGEF1-203ENST00000372195 TRIM10Q9UDY6 481 aa25.5■■□□□ 1.67
RAPGEF1-203ENST00000372195 CCDC137Q6PK04 289 aaKnown RBP25.5■■□□□ 1.67
RAPGEF1-203ENST00000372195 SCHIP1Q9P0W5 487 aaPredicted RBP25.5■■□□□ 1.67
RAPGEF1-203ENST00000372195 GABBR1Q9UBS5 961 aa25.5■■□□□ 1.67
RAPGEF1-203ENST00000372195 hCG_2014768A0A024R1R8 64 aa25.5■■□□□ 1.67
RAPGEF1-203ENST00000372195 KRT14P02533 472 aa25.5■■□□□ 1.67
RAPGEF1-203ENST00000372195 FBXL5Q9UKA1 691 aa25.5■■□□□ 1.67
RAPGEF1-203ENST00000372195 LDHAP00338 332 aaKnown RBP25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 SNRNP48Q6IEG0 339 aaKnown RBP25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 FOXP4Q8IVH2 680 aaPredicted RBP25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 CEP19Q96LK0 163 aa25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 COPS2P61201 443 aa25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 CAPRIN1Q14444 709 aaKnown RBP25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 WDR75Q8IWA0 830 aaKnown RBP25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 PRPF38AQ8NAV1 312 aaKnown RBP25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 OSBPL5Q9H0X9 879 aaPredicted RBP25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 UPF3AQ9H1J1 476 aaKnown RBP25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 FAM205CA6NFA0 338 aa25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 BRAFP15056 766 aa25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 ATICP31939 592 aa25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 KDELC2Q7Z4H8 507 aa25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 PRMT1Q99873 361 aaKnown RBP25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 ABCD1P33897 745 aa25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 CIAPIN1Q6FI81 312 aa25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 SYNDIG1LA6NDD5 238 aa25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 FAM161BQ96MY7 647 aa25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 LRRC1Q9BTT6 524 aa25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 POLR3FQ9H1D9 316 aaPredicted RBP25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 AMACRQ9UHK6 382 aa25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 TRPC5Q9UL62 973 aaPredicted RBP25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 PRDM15P57071 1507 aaPredicted RBP25.49■■□□□ 1.67
RAPGEF1-203ENST00000372195 STOX1Q6ZVD7 989 aa25.48■■□□□ 1.67
RAPGEF1-203ENST00000372195 PROM2Q8N271 834 aa25.48■■□□□ 1.67
RAPGEF1-203ENST00000372195 BARHL2Q9NY43 387 aa25.48■■□□□ 1.67
RAPGEF1-203ENST00000372195 GSG1L2A8MUP6 293 aa25.48■■□□□ 1.67
RAPGEF1-203ENST00000372195 SH2D3AQ9BRG2 576 aa25.48■■□□□ 1.67
RAPGEF1-203ENST00000372195 RPAP1Q9BWH6 1393 aaPredicted RBP25.48■■□□□ 1.67
RAPGEF1-203ENST00000372195 RAPGEF5Q92565 580 aa25.48■■□□□ 1.67
RAPGEF1-203ENST00000372195 SMARCAL1Q9NZC9 954 aa25.48■■□□□ 1.67
RAPGEF1-203ENST00000372195 GOLGA8RI6L899 631 aa25.48■■□□□ 1.67
RAPGEF1-203ENST00000372195 ECE2O60344 883 aa25.48■■□□□ 1.67
RAPGEF1-203ENST00000372195 PSMC1P62191 440 aaKnown RBP25.48■■□□□ 1.67
RAPGEF1-203ENST00000372195 EDEM3Q9BZQ6 932 aa25.48■■□□□ 1.67
RAPGEF1-203ENST00000372195 ZHX2Q9Y6X8 837 aa25.48■■□□□ 1.67
RAPGEF1-203ENST00000372195 PAMP19021 973 aa25.48■■□□□ 1.67
RAPGEF1-203ENST00000372195 TMEM35BQ8NCS4 154 aa25.48■■□□□ 1.67
RAPGEF1-203ENST00000372195 IFT43Q96FT9 208 aa25.48■■□□□ 1.67
RAPGEF1-203ENST00000372195 EIF2AK1Q9BQI3 630 aaKnown RBP25.48■■□□□ 1.67
RAPGEF1-203ENST00000372195 TAF1DQ9H5J8 278 aaPredicted RBP25.48■■□□□ 1.67
RAPGEF1-203ENST00000372195 ZNF302Q9NR11 478 aa25.48■■□□□ 1.67
RAPGEF1-203ENST00000372195 MMP10P09238 476 aa25.47■■□□□ 1.67
RAPGEF1-203ENST00000372195 LXNQ9BS40 222 aa25.47■■□□□ 1.67
RAPGEF1-203ENST00000372195 L3MBTL1Q9Y468 752 aa25.47■■□□□ 1.67
RAPGEF1-203ENST00000372195 ARHGDIAP52565 204 aa25.47■■□□□ 1.67
RAPGEF1-203ENST00000372195 KRT33BQ14525 404 aa25.47■■□□□ 1.67
RAPGEF1-203ENST00000372195 METTL16Q86W50 562 aaKnown RBP25.47■■□□□ 1.67
RAPGEF1-203ENST00000372195 ANKARQ7Z5J8 1434 aa25.47■■□□□ 1.67
RAPGEF1-203ENST00000372195 EMSYQ7Z589 1322 aa25.47■■□□□ 1.67
RAPGEF1-203ENST00000372195 PPP4R4Q6NUP7 873 aa25.47■■□□□ 1.67
RAPGEF1-203ENST00000372195 DHX38Q92620 1227 aaKnown RBP25.47■■□□□ 1.67
RAPGEF1-203ENST00000372195 ADA2Q9NZK5 511 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms