RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 EIF4A3P38919 411 aaKnown RBP12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 MNAT1P51948 309 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 NAP1L1P55209 391 aaKnown RBP12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 AP3B2Q13367 1082 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 KLHDC7AQ5VTJ3 777 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 MAMDC4Q6UXC1 1216 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 GUF1Q8N442 669 aaKnown RBP12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 HDAC7Q8WUI4 952 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 ARL8AQ96BM9 186 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 TLR10Q9BXR5 811 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 STK17AQ9UEE5 414 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 BTNL10A8MVZ5 291 aa12.47□□□□□ -0.41
TSPAN1-201ENST00000372003 OR52Z1P0C646 297 aa12.47□□□□□ -0.41
TSPAN1-201ENST00000372003 HSPA9P38646 679 aaKnown RBP12.47□□□□□ -0.41
TSPAN1-201ENST00000372003 SMTNP53814 917 aa12.47□□□□□ -0.41
TSPAN1-201ENST00000372003 PSMD2Q13200 908 aa12.47□□□□□ -0.41
TSPAN1-201ENST00000372003 STXBP2Q15833 593 aa12.47□□□□□ -0.41
TSPAN1-201ENST00000372003 PTGISQ16647 500 aa12.47□□□□□ -0.41
TSPAN1-201ENST00000372003 PDXDC1Q6P996 788 aa12.47□□□□□ -0.41
TSPAN1-201ENST00000372003 KCNV1Q6PIU1 500 aa12.47□□□□□ -0.41
TSPAN1-201ENST00000372003 KRT25Q7Z3Z0 450 aa12.47□□□□□ -0.41
TSPAN1-201ENST00000372003 CCDC50Q8IVM0 306 aa12.47□□□□□ -0.41
TSPAN1-201ENST00000372003 HOMEZQ8IX15 550 aa12.47□□□□□ -0.41
TSPAN1-201ENST00000372003 FBXO16Q8IX29 292 aaPredicted RBP12.47□□□□□ -0.41
TSPAN1-201ENST00000372003 P3H4Q92791 437 aa12.47□□□□□ -0.41
TSPAN1-201ENST00000372003 ATP6V1G3Q96LB4 118 aa12.47□□□□□ -0.41
TSPAN1-201ENST00000372003 IWS1Q96ST2 819 aa12.47□□□□□ -0.41
TSPAN1-201ENST00000372003 EHMT1Q9H9B1 1298 aa12.47□□□□□ -0.41
TSPAN1-201ENST00000372003 MLXIPQ9HAP2 919 aa12.47□□□□□ -0.41
TSPAN1-201ENST00000372003 SYNGAP1Q96PV0 1343 aa12.47□□□□□ -0.41
TSPAN1-201ENST00000372003 TMCO5BA8MYB1 307 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 CHUKO15111 745 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 FAM107AO95990 144 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 MYBP10242 640 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 PLCG1P19174 1290 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 NR1D1P20393 614 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 EDNRBP24530 442 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 CCND2P30279 289 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 CCND3P30281 292 aaPredicted RBP12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 MDH1P40925 334 aaKnown RBP12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 KLK7P49862 253 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 TNNC1P63316 161 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 ASIC1P78348 528 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 ACVR2BQ13705 512 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 C10orf76Q5T2E6 689 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 NAA35Q5VZE5 725 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 NFRKBQ6P4R8 1299 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 SEPT14Q6ZU15 432 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 UNC13DQ70J99 1090 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 VSIG10LQ86VR7 867 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 TRPV1Q8NER1 839 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 ZNF473Q8WTR7 871 aaKnown RBP12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 BAP1Q92560 729 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 CALML4Q96GE6 196 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 TMEM60Q9H2L4 133 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 ABHD16BQ9H3Z7 469 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 PLCB1Q9NQ66 1216 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 PDGFCQ9NRA1 345 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 CAPN7Q9Y6W3 813 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 PLXNB2O15031 1838 aa12.46□□□□□ -0.41
TSPAN1-201ENST00000372003 MGAMO43451 1857 aa12.46□□□□□ -0.42
TSPAN1-201ENST00000372003 RPTORQ8N122 1335 aa12.46□□□□□ -0.42
TSPAN1-201ENST00000372003 MYH10P35580 1976 aa12.46□□□□□ -0.42
TSPAN1-201ENST00000372003 IGHA2P01877 340 aa12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 SERPING1P05155 500 aa12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 ZNF76P36508 570 aa12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 MRPS9P82933 396 aaKnown RBP12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 ARHGAP4P98171 946 aa12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 ACTN3Q08043 901 aaPredicted RBP12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 STK4Q13043 487 aa12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 PDCLQ13371 301 aa12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 BIRC3Q13489 604 aa12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 CUL1Q13616 776 aa12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 MTFR1Q15390 333 aa12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 NAB2Q15742 525 aa12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 INF2Q27J81 1249 aa12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 TEX2Q8IWB9 1127 aa12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 MAGEC3Q8TD91 643 aa12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 MORC4Q8TE76 937 aa12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 TBCKQ8TEA7 893 aa12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 RNPC3Q96LT9 517 aaKnown RBP12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 CCDC43Q96MW1 224 aaKnown RBP12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 SEMA6BQ9H3T3 888 aa12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 HMX1Q9NP08 348 aaPredicted RBP12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 RBM12Q9NTZ6 932 aaKnown RBP12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 CEP72Q9P209 647 aa12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 PCDHGC5Q9Y5F6 944 aa12.45□□□□□ -0.42
TSPAN1-201ENST00000372003 DOCK3Q8IZD9 2030 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 LOC102724159A0A0B4J2E5 919 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 GOLGA6L10A6NI86 522 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 ZNF233A6NK53 670 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 H0YHG0 523 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 HEXIM1O94992 359 aaKnown RBP12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 PLEKP08567 350 aaPredicted RBP12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 ZNF865P0CJ78 1059 aaPredicted RBP12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 CYBAP13498 195 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 SREBF1P36956 1147 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 SLC7A5Q01650 507 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 NONOQ15233 471 aaKnown RBP eCLIP12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 PWP2Q15269 919 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms