RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 CSRNP1Q96S65 589 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 ERP44Q9BS26 406 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 TMX4Q9H1E5 349 aaPredicted RBP11.77□□□□□ -0.53
LRIF1-201ENST00000369763 PI4KBQ9UBF8 816 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 APEX2Q9UBZ4 518 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 TBK1Q9UHD2 729 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 STXBP5LQ9Y2K9 1186 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 RGS16O15492 202 aaPredicted RBP11.77□□□□□ -0.53
LRIF1-201ENST00000369763 COMTP21964 271 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 RPL21P46778 160 aaKnown RBP11.77□□□□□ -0.53
LRIF1-201ENST00000369763 NT5C2P49902 561 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 MAP2K1Q02750 393 aaPredicted RBP11.77□□□□□ -0.53
LRIF1-201ENST00000369763 LLGL2Q6P1M3 1020 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 SEPT14Q6ZU15 432 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 ZDHHC14Q8IZN3 488 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 DYDC1Q8WWB3 177 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 LXNQ9BS40 222 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 ZNF577Q9BSK1 485 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 STK33Q9BYT3 514 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 USP20Q9Y2K6 914 aa11.77□□□□□ -0.53
LRIF1-201ENST00000369763 ARHGEF35A5YM69 484 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 CYP26A1O43174 497 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 HIP1RO75146 1068 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 SGPL1O95470 568 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 ZBTB48P10074 688 aaPredicted RBP11.76□□□□□ -0.53
LRIF1-201ENST00000369763 CREB1P16220 341 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 LMNB1P20700 586 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 SREBF1P36956 1147 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 SP4Q02446 784 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 ZKSCAN8Q15776 578 aaPredicted RBP11.76□□□□□ -0.53
LRIF1-201ENST00000369763 LONRF1Q17RB8 773 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 OTOP1Q7RTM1 612 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 CPXCR1Q8N123 301 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 TCP11Q8WWU5 503 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 CALR3Q96L12 384 aaKnown RBP11.76□□□□□ -0.53
LRIF1-201ENST00000369763 GPR88Q9GZN0 384 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 RPSAP08865 295 aaKnown RBP11.76□□□□□ -0.53
LRIF1-201ENST00000369763 DLATP10515 647 aaKnown RBP11.76□□□□□ -0.53
LRIF1-201ENST00000369763 PPP3CAQ08209 521 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 AP3B2Q13367 1082 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 MTMR3Q13615 1198 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 TNIP1Q15025 636 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 PPP1R7Q15435 360 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 TTC27Q6P3X3 843 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 C15orf52Q6ZUT6 534 aaKnown RBP11.76□□□□□ -0.53
LRIF1-201ENST00000369763 C1orf186Q6ZWK4 172 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 ZNF720Q7Z2F6 126 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 ATG4AQ8WYN0 398 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 MRRFQ96E11 262 aaKnown RBP11.76□□□□□ -0.53
LRIF1-201ENST00000369763 SAAL1Q96ER3 474 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 DDX23Q9BUQ8 820 aaKnown RBP11.76□□□□□ -0.53
LRIF1-201ENST00000369763 VCPKMTQ9H867 229 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 CYP3A7-CYP3A51PA0A087WV96 503 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 CLTAP09496 248 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 PYGMP11217 842 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 CYP3A7P24462 503 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 CCDC137Q6PK04 289 aaKnown RBP11.76□□□□□ -0.53
LRIF1-201ENST00000369763 LRIG3Q6UXM1 1119 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 SLFN11Q7Z7L1 901 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 SLC47A2Q86VL8 602 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 CDAN1Q8IWY9 1227 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 GDAP1Q8TB36 358 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 NEK9Q8TD19 979 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 FAM20AQ96MK3 541 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 NAP1L4Q99733 375 aaKnown RBP11.76□□□□□ -0.53
LRIF1-201ENST00000369763 RAB17Q9H0T7 212 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 UNC45AQ9H3U1 944 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 SLITRK6Q9H5Y7 841 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 FAM114A2Q9NRY5 505 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 BAIAP2L1Q9UHR4 511 aa11.76□□□□□ -0.53
LRIF1-201ENST00000369763 A6NNZ2 444 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 MAP2K2P36507 400 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 SOX10P56693 466 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 BIRC3Q13489 604 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 TUBB8Q3ZCM7 444 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 HP1BP3Q5SSJ5 553 aaPredicted RBP11.75□□□□□ -0.53
LRIF1-201ENST00000369763 RBM26Q5T8P6 1007 aaKnown RBP11.75□□□□□ -0.53
LRIF1-201ENST00000369763 MEX3CQ5U5Q3 659 aaKnown RBP11.75□□□□□ -0.53
LRIF1-201ENST00000369763 HIBCHQ6NVY1 386 aaPredicted RBP11.75□□□□□ -0.53
LRIF1-201ENST00000369763 PRUNE1Q86TP1 453 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 LRRC34Q8IZ02 419 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 DHX38Q92620 1227 aaKnown RBP11.75□□□□□ -0.53
LRIF1-201ENST00000369763 CCDC17Q96LX7 622 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 XPO6Q96QU8 1125 aaKnown RBP11.75□□□□□ -0.53
LRIF1-201ENST00000369763 AGPAT1Q99943 283 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 HSD17B14Q9BPX1 270 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 TRIM7Q9C029 511 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 KCNK9Q9NPC2 374 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 CTNNAL1Q9UBT7 734 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 POLRMTO00411 1230 aaKnown RBP11.75□□□□□ -0.53
LRIF1-201ENST00000369763 FSBPO95073 299 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 PTENP60484 403 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 BFSP1Q12934 665 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 VPS72Q15906 364 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 CAPN12Q6ZSI9 719 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 ARHGAP27Q6ZUM4 889 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 TBC1D1Q86TI0 1168 aaPredicted RBP11.75□□□□□ -0.53
LRIF1-201ENST00000369763 DCAF4Q8WV16 495 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 HVCN1Q96D96 273 aa11.75□□□□□ -0.53
LRIF1-201ENST00000369763 TOPORSQ9NS56 1045 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms