RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 SIX2Q9NPC8 291 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.2■□□□□ 0.5
DKC1-201ENST00000369550 NCANO14594 1321 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 SYNGAP1Q96PV0 1343 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 COL4A1P02462 1669 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 CALUO43852 315 aaPredicted RBP18.2■□□□□ 0.5
DKC1-201ENST00000369550 PTGIRP43119 386 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 VPS72Q15906 364 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 TNFAIP8L3Q5GJ75 292 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 SLC30A9Q6PML9 568 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 SLC17A8Q8NDX2 589 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 ARHGEF26Q96DR7 871 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 TSC22D3Q99576 134 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 THAP2Q9H0W7 228 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 ZNF287Q9HBT7 754 aa18.2■□□□□ 0.5
DKC1-201ENST00000369550 USP17L5A8MUK1 530 aa18.19■□□□□ 0.5
DKC1-201ENST00000369550 SMIM24O75264 130 aa18.19■□□□□ 0.5
DKC1-201ENST00000369550 PECAM1P16284 738 aaPredicted RBP18.19■□□□□ 0.5
DKC1-201ENST00000369550 DIXDC1Q155Q3 683 aa18.19■□□□□ 0.5
DKC1-201ENST00000369550 C3orf67Q6ZVT6 689 aa18.19■□□□□ 0.5
DKC1-201ENST00000369550 PRELID2Q8N945 189 aa18.19■□□□□ 0.5
DKC1-201ENST00000369550 ANKRD27Q96NW4 1050 aa18.19■□□□□ 0.5
DKC1-201ENST00000369550 ROPN1BQ9BZX4 212 aaPredicted RBP18.19■□□□□ 0.5
DKC1-201ENST00000369550 ROPN1Q9HAT0 212 aaPredicted RBP18.19■□□□□ 0.5
DKC1-201ENST00000369550 PCDHB13Q9Y5F0 798 aa18.19■□□□□ 0.5
DKC1-201ENST00000369550 TMEM110-MUSTN1A8MSY1 372 aa18.19■□□□□ 0.5
DKC1-201ENST00000369550 UNC5CO95185 931 aa18.19■□□□□ 0.5
DKC1-201ENST00000369550 ATP5DP30049 168 aa18.19■□□□□ 0.5
DKC1-201ENST00000369550 STX2P32856 288 aa18.19■□□□□ 0.5
DKC1-201ENST00000369550 MKRN4PQ13434 485 aaPredicted RBP18.19■□□□□ 0.5
DKC1-201ENST00000369550 CLEC4GQ6UXB4 293 aa18.19■□□□□ 0.5
DKC1-201ENST00000369550 MAPKAPK5Q8IW41 473 aa18.19■□□□□ 0.5
DKC1-201ENST00000369550 LMNTD2Q8IXW0 634 aa18.19■□□□□ 0.5
DKC1-201ENST00000369550 UBL4BQ8N7F7 174 aa18.19■□□□□ 0.5
DKC1-201ENST00000369550 SLC30A5Q8TAD4 765 aa18.19■□□□□ 0.5
DKC1-201ENST00000369550 DDX23Q9BUQ8 820 aaKnown RBP18.19■□□□□ 0.5
DKC1-201ENST00000369550 TRAF3IP3Q9Y228 551 aa18.19■□□□□ 0.5
DKC1-201ENST00000369550 PFASO15067 1338 aa18.19■□□□□ 0.5
DKC1-201ENST00000369550 DPPA5A6NC42 116 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 GH1P01241 217 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 PDHA1P08559 390 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 CCNB1P14635 433 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 SOX5P35711 763 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 CALCOCO2Q13137 446 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 TTC27Q6P3X3 843 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 INTS8Q75QN2 995 aaKnown RBP18.18■□□□□ 0.5
DKC1-201ENST00000369550 SLC35C1Q96A29 364 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 METTL14Q9HCE5 456 aaKnown RBP18.18■□□□□ 0.5
DKC1-201ENST00000369550 TXLNGQ9NUQ3 528 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 NKX1-2Q9UD57 310 aaPredicted RBP18.18■□□□□ 0.5
DKC1-201ENST00000369550 PCYOX1Q9UHG3 505 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 LRRD1A4D1F6 860 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 WFS1O76024 890 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 FESP07332 822 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 HSPA6P17066 643 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 CASP4P49662 377 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 RAD23BP54727 409 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 MXRA7P84157 204 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 VSTM1Q6UX27 236 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 CKAP2Q8WWK9 683 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 CELF1Q92879 486 aaKnown RBP18.18■□□□□ 0.5
DKC1-201ENST00000369550 ALG6Q9Y672 507 aa18.18■□□□□ 0.5
DKC1-201ENST00000369550 FOXO6A8MYZ6 492 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 hCG_1984214I3L0E3 225 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 AHCYL1O43865 530 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 NR3C1P04150 777 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 RPL13P26373 211 aaKnown RBP18.17■□□□□ 0.5
DKC1-201ENST00000369550 ADCY1Q08828 1119 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 VSIG1Q86XK7 387 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 ZNF713Q8N859 430 aaPredicted RBP18.17■□□□□ 0.5
DKC1-201ENST00000369550 NGLY1Q96IV0 654 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 C8orf37Q96NL8 207 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 COG5Q9UP83 839 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 ROBO3Q96MS0 1386 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 CLIC2O15247 247 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 BRAFP15056 766 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 TNFAIP3P21580 790 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 SKIV2L2P42285 1042 aaKnown RBP18.17■□□□□ 0.5
DKC1-201ENST00000369550 ERFEQ4G0M1 354 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 ARSHQ5FYA8 562 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 SEL1L2Q5TEA6 688 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 SFR1Q86XK3 245 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 LINC00116Q8NCU8 138 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 KRT35Q92764 455 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 CEP95Q96GE4 821 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 CDC42EP4Q9H3Q1 356 aaKnown RBP18.17■□□□□ 0.5
DKC1-201ENST00000369550 RNPEPL1Q9HAU8 725 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 CTTNBP2NLQ9P2B4 639 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 CTNNAL1Q9UBT7 734 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 PRKAG3Q9UGI9 489 aa18.17■□□□□ 0.5
DKC1-201ENST00000369550 ZMYND8Q9ULU4 1186 aaPredicted RBP18.17■□□□□ 0.5
DKC1-201ENST00000369550 PASKQ96RG2 1323 aa18.16■□□□□ 0.5
DKC1-201ENST00000369550 POTEFA5A3E0 1075 aa18.16■□□□□ 0.5
DKC1-201ENST00000369550 ANKRD63C9JTQ0 380 aa18.16■□□□□ 0.5
DKC1-201ENST00000369550 POTEIP0CG38 1075 aa18.16■□□□□ 0.5
DKC1-201ENST00000369550 MYBL1P10243 752 aa18.16■□□□□ 0.5
DKC1-201ENST00000369550 SMARCA1P28370 1054 aa18.16■□□□□ 0.5
DKC1-201ENST00000369550 PAPOLAP51003 745 aaKnown RBP18.16■□□□□ 0.5
DKC1-201ENST00000369550 MKRN3Q13064 507 aaKnown RBP18.16■□□□□ 0.5
DKC1-201ENST00000369550 DRAP1Q14919 205 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms