RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 NLGN1Q8N2Q7 840 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 PARD3BQ8TEW8 1205 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 DYDC1Q8WWB3 177 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 FGFBP2Q9BYJ0 223 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 TAOK3Q9H2K8 898 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 MIF4GDA9UHW6 222 aaKnown RBP11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 SLC16A3O15427 465 aaKnown RBP11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 CAMTA2O94983 1202 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 UNC5CO95185 931 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 USP17L8P0C7I0 530 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 ATP4AP20648 1035 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 NR2F2P24468 414 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 RPL21P46778 160 aaKnown RBP11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 RAB27AP51159 221 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 TRAF1Q13077 416 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 SLC30A9Q6PML9 568 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 CYFIP1Q7L576 1253 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 LMNTD2Q8IXW0 634 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 LNX1Q8TBB1 728 aaPredicted RBP11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 FBF1Q8TES7 1133 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 ZFAND2BQ8WV99 257 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 YIPF3Q9GZM5 350 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 RNPEPL1Q9HAU8 725 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 METTL14Q9HCE5 456 aaKnown RBP11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 USP40Q9NVE5 1235 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 BIN2Q9UBW5 565 aaPredicted RBP11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 PPP1R9AQ9ULJ8 1098 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 RPL26L1Q9UNX3 145 aaKnown RBP11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 PCDHA3Q9Y5H8 950 aa11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 DDX60LQ5H9U9 1706 aaKnown RBP11.34□□□□□ -0.59
LYSMD1-201ENST00000368908 USP17L3A6NCW0 530 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 USP17L4A6NCW7 530 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 SMIM23A6NLE4 172 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 EDIL3O43854 480 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 TDP2O95551 362 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 GYS1P13807 737 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 CTNNA2P26232 953 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 STAT1P42224 750 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 ECM1Q16610 540 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 CWF19L1Q69YN2 538 aaKnown RBP11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 CLEC4GQ6UXB4 293 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 USP17L1Q7RTZ2 530 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 AGGF1Q8N302 714 aaeCLIP11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 KIF2BQ8N4N8 673 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 FITM2Q8N6M3 262 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 SLC35G2Q8TBE7 412 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 GLG1Q92896 1179 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 ART4Q93070 314 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 ZBTB10Q96DT7 871 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 LRMDAQ9H2I8 198 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 KANSL2Q9H9L4 492 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 MKNK2Q9HBH9 465 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 SPON1Q9HCB6 807 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 ZNF652Q9Y2D9 606 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 NRXN2Q9P2S2 1712 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 SNED1Q8TER0 1413 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 ENO4A6NNW6 628 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 EYA4O95677 639 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 XRCC5P13010 732 aaKnown RBP11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 ATP6V1C1P21283 382 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 ADCY7P51828 1080 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 ROR2Q01974 943 aaKnown RBP11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 TCEAL1Q15170 157 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 CYP1B1Q16678 543 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 NUGGCQ68CJ6 796 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 PPP1R18Q6NYC8 613 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 VSTM1Q6UX27 236 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 ENDOVQ8N8Q3 282 aaKnown RBP11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 CTNNBL1Q8WYA6 563 aaPredicted RBP11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 TMEM237Q96Q45 408 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 SYT11Q9BT88 431 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 PDGFDQ9GZP0 370 aaPredicted RBP11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 TMEM260Q9NX78 707 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 PNMA3Q9UL41 463 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 STK38LQ9Y2H1 464 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 TAF1P21675 1872 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 CDK5RAP2Q96SN8 1893 aa11.33□□□□□ -0.6
LYSMD1-201ENST00000368908 TMEM120BA0PK00 339 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 BAG3O95817 575 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 CALB2P22676 271 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 GCLCP48506 637 aaPredicted RBP11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 CTCFP49711 727 aaPredicted RBP11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 HERC4Q5GLZ8 1057 aaPredicted RBP11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 C11orf63Q6NUN7 778 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 ZNF444Q8N0Y2 327 aaPredicted RBP11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 INPP5DQ92835 1189 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 TSC22D3Q99576 134 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 RIOX1Q9H6W3 641 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 KLHL14Q9P2G3 628 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 AJAP1Q9UKB5 411 aaPredicted RBP11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 GPR75-ASB3A0A0A6YYF3 556 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 LRRD1A4D1F6 860 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 PDXKO00764 312 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 CALUO43852 315 aaPredicted RBP11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 TTLL1O95922 423 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 PLA2G4BP0C869 781 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 GOLGA8HP0CJ92 632 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 KRT13P13646 458 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 ACADSP16219 412 aa11.32□□□□□ -0.6
LYSMD1-201ENST00000368908 CYP11B2P19099 503 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms