RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 AMHP03971 560 aa20.64■□□□□ 0.89
LMNA-204ENST00000368298 ZNF131P52739 623 aa20.64■□□□□ 0.89
LMNA-204ENST00000368298 DEFB103AP81534 67 aa20.64■□□□□ 0.89
LMNA-204ENST00000368298 MBTD1Q05BQ5 628 aa20.64■□□□□ 0.89
LMNA-204ENST00000368298 DHX8Q14562 1220 aaKnown RBP20.64■□□□□ 0.89
LMNA-204ENST00000368298 KCNN1Q92952 543 aa20.64■□□□□ 0.89
LMNA-204ENST00000368298 TOP1MTQ969P6 601 aa20.64■□□□□ 0.89
LMNA-204ENST00000368298 REEP2Q9BRK0 252 aa20.64■□□□□ 0.89
LMNA-204ENST00000368298 C2orf40Q9H1Z8 148 aa20.64■□□□□ 0.89
LMNA-204ENST00000368298 C1orf112Q9NSG2 853 aa20.64■□□□□ 0.89
LMNA-204ENST00000368298 KBTBD4Q9NVX7 518 aa20.64■□□□□ 0.89
LMNA-204ENST00000368298 LRRIQ4A6NIV6 560 aa20.63■□□□□ 0.89
LMNA-204ENST00000368298 POLR2DO15514 142 aaKnown RBP20.63■□□□□ 0.89
LMNA-204ENST00000368298 PLS3P13797 630 aa20.63■□□□□ 0.89
LMNA-204ENST00000368298 FGFR4P22455 802 aa20.63■□□□□ 0.89
LMNA-204ENST00000368298 EFNA5P52803 228 aa20.63■□□□□ 0.89
LMNA-204ENST00000368298 FAM189BP81408 668 aa20.63■□□□□ 0.89
LMNA-204ENST00000368298 FAM187BQ17R55 369 aa20.63■□□□□ 0.89
LMNA-204ENST00000368298 FAM109BQ6ICB4 259 aaPredicted RBP20.63■□□□□ 0.89
LMNA-204ENST00000368298 SPIRE2Q8WWL2 714 aa20.63■□□□□ 0.89
LMNA-204ENST00000368298 ADAM2Q99965 735 aa20.63■□□□□ 0.89
LMNA-204ENST00000368298 TNMDQ9H2S6 317 aa20.63■□□□□ 0.89
LMNA-204ENST00000368298 FZD8Q9H461 694 aa20.63■□□□□ 0.89
LMNA-204ENST00000368298 MAGEF1Q9HAY2 307 aa20.63■□□□□ 0.89
LMNA-204ENST00000368298 AGPAT5Q9NUQ2 364 aa20.63■□□□□ 0.89
LMNA-204ENST00000368298 MYH11P35749 1972 aa20.63■□□□□ 0.89
LMNA-204ENST00000368298 LAMA3Q16787 3333 aa20.63■□□□□ 0.89
LMNA-204ENST00000368298 NPHP3-ACAD11A0A0J9YXS1 232 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 MYMKA6NI61 221 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 C9IYK1 514 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 PFKFB1P16118 471 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 ZSCAN20P17040 1043 aaPredicted RBP20.62■□□□□ 0.89
LMNA-204ENST00000368298 AXLP30530 894 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 NPTX2P47972 431 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 RAD51AP2Q09MP3 1159 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 DMP1Q13316 513 aaPredicted RBP20.62■□□□□ 0.89
LMNA-204ENST00000368298 AMHR2Q16671 573 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 PPP4R3CPQ6ZMV5 832 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 SLC24A5Q71RS6 500 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 CATSPER4Q7RTX7 472 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 HERC6Q8IVU3 1022 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 ZBTB8OSQ8IWT0 167 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 DEPTORQ8TB45 409 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 DHX58Q96C10 678 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 LRRC27Q9C0I9 530 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 CCDC113Q9H0I3 377 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 LARSQ9P2J5 1176 aaKnown RBP20.62■□□□□ 0.89
LMNA-204ENST00000368298 ADGRA3Q8IWK6 1321 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 DENND3A2RUS2 1198 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 SFI1A8K8P3 1242 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 INO80B-WBP1J3KQ70 363 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 SOX1O00570 391 aaPredicted RBP20.62■□□□□ 0.89
LMNA-204ENST00000368298 PRPF40AO75400 957 aaKnown RBP20.62■□□□□ 0.89
LMNA-204ENST00000368298 GJB5O95377 273 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 HOXA11P31270 313 aaPredicted RBP20.62■□□□□ 0.89
LMNA-204ENST00000368298 PEX3P56589 373 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 CNNM4Q6P4Q7 775 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 DDX12PQ92771 950 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 DNAJC19Q96DA6 116 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 PRIMPOLQ96LW4 560 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 GZF1Q9H116 711 aaPredicted RBP20.62■□□□□ 0.89
LMNA-204ENST00000368298 TMEM134Q9H6X4 195 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 RNF216Q9NWF9 866 aaPredicted RBP20.62■□□□□ 0.89
LMNA-204ENST00000368298 DACT1Q9NYF0 836 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 ARHGAP28Q9P2N2 729 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 USP25Q9UHP3 1055 aa20.62■□□□□ 0.89
LMNA-204ENST00000368298 A0A1B0GVL5 298 aa20.61■□□□□ 0.89
LMNA-204ENST00000368298 TSPAN1O60635 241 aa20.61■□□□□ 0.89
LMNA-204ENST00000368298 ERLIN2O94905 339 aa20.61■□□□□ 0.89
LMNA-204ENST00000368298 SCP2P22307 547 aa20.61■□□□□ 0.89
LMNA-204ENST00000368298 SARSP49591 514 aaKnown RBP20.61■□□□□ 0.89
LMNA-204ENST00000368298 MYOCDQ8IZQ8 938 aa20.61■□□□□ 0.89
LMNA-204ENST00000368298 MRPS27Q92552 414 aaKnown RBP20.61■□□□□ 0.89
LMNA-204ENST00000368298 ELAC1Q9H777 363 aaKnown RBP20.61■□□□□ 0.89
LMNA-204ENST00000368298 PRMT7Q9NVM4 692 aaPredicted RBP20.61■□□□□ 0.89
LMNA-204ENST00000368298 PCDHA11Q9Y5I1 949 aa20.61■□□□□ 0.89
LMNA-204ENST00000368298 SZT2Q5T011 3432 aa20.61■□□□□ 0.89
LMNA-204ENST00000368298 PHLPP2Q6ZVD8 1323 aa20.6■□□□□ 0.89
LMNA-204ENST00000368298 A0A0U1RQF3 1178 aa20.6■□□□□ 0.89
LMNA-204ENST00000368298 GRXCR1A8MXD5 290 aa20.6■□□□□ 0.89
LMNA-204ENST00000368298 KRT18P05783 430 aaKnown RBP20.6■□□□□ 0.89
LMNA-204ENST00000368298 SLFN14P0C7P3 912 aa20.6■□□□□ 0.89
LMNA-204ENST00000368298 SMTNP53814 917 aa20.6■□□□□ 0.89
LMNA-204ENST00000368298 HTRA4P83105 476 aaPredicted RBP20.6■□□□□ 0.89
LMNA-204ENST00000368298 AMPD3Q01432 767 aa20.6■□□□□ 0.89
LMNA-204ENST00000368298 CACNB1Q02641 598 aaPredicted RBP20.6■□□□□ 0.89
LMNA-204ENST00000368298 MAPK6Q16659 721 aa20.6■□□□□ 0.89
LMNA-204ENST00000368298 CSPP1Q1MSJ5 1256 aa20.6■□□□□ 0.89
LMNA-204ENST00000368298 KLHL40Q2TBA0 621 aa20.6■□□□□ 0.89
LMNA-204ENST00000368298 PBX4Q9BYU1 374 aa20.6■□□□□ 0.89
LMNA-204ENST00000368298 PARVGQ9HBI0 331 aa20.6■□□□□ 0.89
LMNA-204ENST00000368298 KMT5AQ9NQR1 393 aa20.6■□□□□ 0.89
LMNA-204ENST00000368298 PIN4Q9Y237 131 aaKnown RBP20.6■□□□□ 0.89
LMNA-204ENST00000368298 GBF1Q92538 1859 aa20.59■□□□□ 0.89
LMNA-204ENST00000368298 FRMD3A2A2Y4 597 aa20.59■□□□□ 0.89
LMNA-204ENST00000368298 CCDC169A6NNP5 214 aa20.59■□□□□ 0.89
LMNA-204ENST00000368298 ACKR2O00590 384 aa20.59■□□□□ 0.89
LMNA-204ENST00000368298 ACTN4O43707 911 aaKnown RBP20.59■□□□□ 0.89
LMNA-204ENST00000368298 FAM13AO94988 1023 aa20.59■□□□□ 0.89
LMNA-204ENST00000368298 NDUFA8P51970 172 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms