RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 GPC5P78333 572 aa13.77□□□□□ -0.2
PTPRK-207ENST00000368226 NFRKBQ6P4R8 1299 aa13.77□□□□□ -0.2
PTPRK-207ENST00000368226 FMR1NBQ8N0W7 255 aaPredicted RBP13.77□□□□□ -0.2
PTPRK-207ENST00000368226 NEK9Q8TD19 979 aa13.77□□□□□ -0.2
PTPRK-207ENST00000368226 SPON2Q9BUD6 331 aa13.77□□□□□ -0.2
PTPRK-207ENST00000368226 HDAC6Q9UBN7 1215 aa13.77□□□□□ -0.2
PTPRK-207ENST00000368226 AGO2Q9UKV8 859 aaKnown RBP13.77□□□□□ -0.2
PTPRK-207ENST00000368226 KLRK1P26718 216 aa13.77□□□□□ -0.2
PTPRK-207ENST00000368226 RHOT2Q8IXI1 618 aa13.77□□□□□ -0.2
PTPRK-207ENST00000368226 PDIK1LQ8N165 341 aa13.77□□□□□ -0.2
PTPRK-207ENST00000368226 TRPC7Q9HCX4 862 aa13.77□□□□□ -0.2
PTPRK-207ENST00000368226 ASNSD1Q9NWL6 643 aa13.77□□□□□ -0.2
PTPRK-207ENST00000368226 RNF17Q9BXT8 1623 aaKnown RBP13.77□□□□□ -0.2
PTPRK-207ENST00000368226 JCADQ9P266 1359 aa13.77□□□□□ -0.2
PTPRK-207ENST00000368226 DFFAO00273 331 aa13.77□□□□□ -0.21
PTPRK-207ENST00000368226 DPEP1P16444 411 aa13.77□□□□□ -0.21
PTPRK-207ENST00000368226 RECQLP46063 649 aaPredicted RBP13.77□□□□□ -0.21
PTPRK-207ENST00000368226 FAM102AQ5T9C2 384 aaPredicted RBP13.77□□□□□ -0.21
PTPRK-207ENST00000368226 FRA10AC1Q70Z53 315 aa13.77□□□□□ -0.21
PTPRK-207ENST00000368226 GPD1LQ8N335 351 aa13.77□□□□□ -0.21
PTPRK-207ENST00000368226 SENP2Q9HC62 589 aa13.77□□□□□ -0.21
PTPRK-207ENST00000368226 AFF4Q9UHB7 1163 aaKnown RBP13.77□□□□□ -0.21
PTPRK-207ENST00000368226 FTLP02792 175 aaPredicted RBP13.77□□□□□ -0.21
PTPRK-207ENST00000368226 C6orf222P0C671 652 aaPredicted RBP13.77□□□□□ -0.21
PTPRK-207ENST00000368226 CA4P22748 312 aa13.77□□□□□ -0.21
PTPRK-207ENST00000368226 SLC10A5Q5PT55 438 aa13.77□□□□□ -0.21
PTPRK-207ENST00000368226 PLA2G4FQ68DD2 849 aa13.77□□□□□ -0.21
PTPRK-207ENST00000368226 PPP4R4Q6NUP7 873 aa13.77□□□□□ -0.21
PTPRK-207ENST00000368226 PPP1R2P3Q6NXS1 205 aa13.77□□□□□ -0.21
PTPRK-207ENST00000368226 MMTAG2Q9BU76 263 aaKnown RBP13.77□□□□□ -0.21
PTPRK-207ENST00000368226 NDUFB10O96000 172 aa13.77□□□□□ -0.21
PTPRK-207ENST00000368226 HOXD10P28358 340 aa13.77□□□□□ -0.21
PTPRK-207ENST00000368226 STAT5BP51692 787 aa13.77□□□□□ -0.21
PTPRK-207ENST00000368226 EZH2Q15910 746 aaKnown RBP13.77□□□□□ -0.21
PTPRK-207ENST00000368226 KLC2Q9H0B6 622 aa13.77□□□□□ -0.21
PTPRK-207ENST00000368226 MRPL46Q9H2W6 279 aaKnown RBP13.77□□□□□ -0.21
PTPRK-207ENST00000368226 HERC5Q9UII4 1024 aaKnown RBP13.77□□□□□ -0.21
PTPRK-207ENST00000368226 PCDHA10Q9Y5I2 948 aa13.77□□□□□ -0.21
PTPRK-207ENST00000368226 SPATA31A1Q5TZJ5 1347 aa13.77□□□□□ -0.21
PTPRK-207ENST00000368226 CDC42BPBQ9Y5S2 1711 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 IQCA1LA6NCM1 817 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 SMIM24O75264 130 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 GGPS1O95749 300 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 GMPSP49915 693 aaPredicted RBP13.76□□□□□ -0.21
PTPRK-207ENST00000368226 FASTKD5Q7L8L6 764 aaKnown RBP13.76□□□□□ -0.21
PTPRK-207ENST00000368226 HAUS6Q7Z4H7 955 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 EDEM3Q9BZQ6 932 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 MTMR4Q9NYA4 1195 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 SUCLA2Q9P2R7 463 aaPredicted RBP13.76□□□□□ -0.21
PTPRK-207ENST00000368226 PLAAQ9Y263 795 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 ESYT3A0FGR9 886 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 EVI5O60447 810 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 GBP5Q96PP8 586 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 DHX35Q9H5Z1 703 aaKnown RBP13.76□□□□□ -0.21
PTPRK-207ENST00000368226 SDC4P31431 198 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 HIPK4Q8NE63 616 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 ATXN7L3BQ96GX2 97 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 HPCAL4Q9UM19 191 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 ZNF609O15014 1411 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 SYNDIG1LA6NDD5 238 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 ZRANB2O95218 330 aaKnown RBP eCLIP13.76□□□□□ -0.21
PTPRK-207ENST00000368226 HMBSP08397 361 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 RARBP10826 455 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 KIF19Q2TAC6 998 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.76□□□□□ -0.21
PTPRK-207ENST00000368226 C1orf167Q5SNV9 1468 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 PRKCBP05771 671 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 VPS72Q15906 364 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 STRIP1Q5VSL9 837 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 ZNF579Q8NAF0 562 aaKnown RBP13.76□□□□□ -0.21
PTPRK-207ENST00000368226 C2orf40Q9H1Z8 148 aa13.76□□□□□ -0.21
PTPRK-207ENST00000368226 ADGRB3O60242 1522 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 GRIK1P39086 918 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 OCRLQ01968 901 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 APBA1Q02410 837 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 LRRC31Q6UY01 552 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 VPS11Q9H270 941 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 KIAA1586Q9HCI6 787 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 HACL1Q9UJ83 578 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 CYP26A1O43174 497 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 ORC4O43929 436 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 HADHAP40939 763 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 RGS7P49802 495 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 CLCN6P51797 869 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 COG2Q14746 738 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 CCHCR1Q8TD31 782 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 MKRN4PQ13434 485 aaPredicted RBP13.75□□□□□ -0.21
PTPRK-207ENST00000368226 KIAA1755Q5JYT7 1200 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 RSBN1LQ6PCB5 846 aaPredicted RBP13.75□□□□□ -0.21
PTPRK-207ENST00000368226 HVCN1Q96D96 273 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 CLTCQ00610 1675 aaKnown RBP13.75□□□□□ -0.21
PTPRK-207ENST00000368226 KIF3CO14782 793 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 RPSAP08865 295 aaKnown RBP13.75□□□□□ -0.21
PTPRK-207ENST00000368226 ALX1Q15699 326 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 CEP55Q53EZ4 464 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 ANKRD40Q6AI12 368 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 RNF135Q8IUD6 432 aa13.75□□□□□ -0.21
PTPRK-207ENST00000368226 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.75□□□□□ -0.21
PTPRK-207ENST00000368226 KRT39Q6A163 491 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 ZC3H18Q86VM9 953 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms