RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 STMN4Q9H169 189 aaPredicted RBP8.82□□□□□ -1
CD46-208ENST00000367042 ACP6Q9NPH0 428 aa8.82□□□□□ -1
CD46-208ENST00000367042 HOMER3Q9NSC5 361 aa8.82□□□□□ -1
CD46-208ENST00000367042 TRAF3IP3Q9Y228 551 aa8.82□□□□□ -1
CD46-208ENST00000367042 FAM86B1E9PN63 330 aa8.82□□□□□ -1
CD46-208ENST00000367042 FAM86B2P0C5J1 330 aa8.82□□□□□ -1
CD46-208ENST00000367042 BCRP11274 1271 aa8.82□□□□□ -1
CD46-208ENST00000367042 EEF2P13639 858 aaKnown RBP8.82□□□□□ -1
CD46-208ENST00000367042 RPA1P27694 616 aa8.82□□□□□ -1
CD46-208ENST00000367042 TM4SF1P30408 202 aa8.82□□□□□ -1
CD46-208ENST00000367042 ELF3P78545 371 aaPredicted RBP8.82□□□□□ -1
CD46-208ENST00000367042 ADCY2Q08462 1091 aa8.82□□□□□ -1
CD46-208ENST00000367042 PPP2R5AQ15172 486 aa8.82□□□□□ -1
CD46-208ENST00000367042 GRIPAP1Q4V328 841 aa8.82□□□□□ -1
CD46-208ENST00000367042 FAM47EQ6ZV65 393 aa8.82□□□□□ -1
CD46-208ENST00000367042 FBXO11Q86XK2 927 aa8.82□□□□□ -1
CD46-208ENST00000367042 RPUSD2Q8IZ73 545 aaKnown RBP8.82□□□□□ -1
CD46-208ENST00000367042 MICAL1Q8TDZ2 1067 aa8.82□□□□□ -1
CD46-208ENST00000367042 CCT6BQ92526 530 aa8.82□□□□□ -1
CD46-208ENST00000367042 PRCCQ92733 491 aaPredicted RBP8.82□□□□□ -1
CD46-208ENST00000367042 DYDC2Q96IM9 177 aa8.82□□□□□ -1
CD46-208ENST00000367042 POP1Q99575 1024 aaKnown RBP8.82□□□□□ -1
CD46-208ENST00000367042 ZC3H12CQ9C0D7 883 aaKnown RBP8.82□□□□□ -1
CD46-208ENST00000367042 PARVGQ9HBI0 331 aa8.82□□□□□ -1
CD46-208ENST00000367042 PITPNM2Q9BZ72 1349 aa8.82□□□□□ -1
CD46-208ENST00000367042 MYH7BA7E2Y1 1941 aa8.82□□□□□ -1
CD46-208ENST00000367042 THSD7AQ9UPZ6 1657 aa8.82□□□□□ -1
CD46-208ENST00000367042 A0A1W2PRG0 241 aa8.82□□□□□ -1
CD46-208ENST00000367042 RPS6KA4O75676 772 aa8.82□□□□□ -1
CD46-208ENST00000367042 UBOX5O94941 541 aa8.82□□□□□ -1
CD46-208ENST00000367042 TMEM253P0C7T8 217 aa8.82□□□□□ -1
CD46-208ENST00000367042 COMTP21964 271 aa8.82□□□□□ -1
CD46-208ENST00000367042 STX2P32856 288 aa8.82□□□□□ -1
CD46-208ENST00000367042 HOXD13P35453 343 aa8.82□□□□□ -1
CD46-208ENST00000367042 PRKCIP41743 596 aa8.82□□□□□ -1
CD46-208ENST00000367042 TNIP1Q15025 636 aa8.82□□□□□ -1
CD46-208ENST00000367042 PPP1R18Q6NYC8 613 aa8.82□□□□□ -1
CD46-208ENST00000367042 SEPT14Q6ZU15 432 aa8.82□□□□□ -1
CD46-208ENST00000367042 KCNV2Q8TDN2 545 aa8.82□□□□□ -1
CD46-208ENST00000367042 TBC1D22AQ8WUA7 517 aa8.82□□□□□ -1
CD46-208ENST00000367042 NSMCE1Q8WV22 266 aa8.82□□□□□ -1
CD46-208ENST00000367042 ARHGEF2Q92974 986 aaKnown RBP8.82□□□□□ -1
CD46-208ENST00000367042 CCDC127Q96BQ5 260 aa8.82□□□□□ -1
CD46-208ENST00000367042 FAM118BQ9BPY3 351 aa8.82□□□□□ -1
CD46-208ENST00000367042 AMNQ9BXJ7 453 aa8.82□□□□□ -1
CD46-208ENST00000367042 STK33Q9BYT3 514 aa8.82□□□□□ -1
CD46-208ENST00000367042 ADAM33Q9BZ11 813 aa8.82□□□□□ -1
CD46-208ENST00000367042 CARD9Q9H257 536 aa8.82□□□□□ -1
CD46-208ENST00000367042 ECT2Q9H8V3 914 aa8.82□□□□□ -1
CD46-208ENST00000367042 MCM8Q9UJA3 840 aa8.82□□□□□ -1
CD46-208ENST00000367042 K7ENM7 598 aa8.81□□□□□ -1
CD46-208ENST00000367042 PPFIA2O75334 1257 aa8.81□□□□□ -1
CD46-208ENST00000367042 ATP2B4P23634 1241 aa8.81□□□□□ -1
CD46-208ENST00000367042 PAX7P23759 505 aa8.81□□□□□ -1
CD46-208ENST00000367042 NFIAQ12857 509 aa8.81□□□□□ -1
CD46-208ENST00000367042 ZYXQ15942 572 aaKnown RBP8.81□□□□□ -1
CD46-208ENST00000367042 CERKLQ49MI3 558 aaPredicted RBP8.81□□□□□ -1
CD46-208ENST00000367042 LRCH2Q5VUJ6 765 aa8.81□□□□□ -1
CD46-208ENST00000367042 TRIM68Q6AZZ1 485 aa8.81□□□□□ -1
CD46-208ENST00000367042 CCDC174Q6PII3 467 aa8.81□□□□□ -1
CD46-208ENST00000367042 STXBP4Q6ZWJ1 553 aa8.81□□□□□ -1
CD46-208ENST00000367042 AMIGO3Q86WK7 504 aa8.81□□□□□ -1
CD46-208ENST00000367042 C1orf131Q8NDD1 294 aaKnown RBP8.81□□□□□ -1
CD46-208ENST00000367042 ATP8B4Q8TF62 1192 aa8.81□□□□□ -1
CD46-208ENST00000367042 PAGR1Q9BTK6 254 aa8.81□□□□□ -1
CD46-208ENST00000367042 DDX23Q9BUQ8 820 aaKnown RBP8.81□□□□□ -1
CD46-208ENST00000367042 KDM4CQ9H3R0 1056 aa8.81□□□□□ -1
CD46-208ENST00000367042 SIX2Q9NPC8 291 aa8.81□□□□□ -1
CD46-208ENST00000367042 APEX2Q9UBZ4 518 aa8.81□□□□□ -1
CD46-208ENST00000367042 GGA2Q9UJY4 613 aa8.81□□□□□ -1
CD46-208ENST00000367042 COG5Q9UP83 839 aa8.81□□□□□ -1
CD46-208ENST00000367042 SYNGAP1Q96PV0 1343 aa8.81□□□□□ -1
CD46-208ENST00000367042 ANKRD62A6NC57 917 aa8.81□□□□□ -1
CD46-208ENST00000367042 GOLGA8IPA6NC78 632 aa8.81□□□□□ -1
CD46-208ENST00000367042 GOLGA8JA6NMD2 632 aa8.81□□□□□ -1
CD46-208ENST00000367042 BTNL10A8MVZ5 291 aa8.81□□□□□ -1
CD46-208ENST00000367042 EML1O00423 815 aa8.81□□□□□ -1
CD46-208ENST00000367042 MSH4O15457 936 aa8.81□□□□□ -1
CD46-208ENST00000367042 THAP12O43422 761 aa8.81□□□□□ -1
CD46-208ENST00000367042 PHF2O75151 1096 aa8.81□□□□□ -1
CD46-208ENST00000367042 KCNJ2P63252 427 aa8.81□□□□□ -1
CD46-208ENST00000367042 ICA1Q05084 483 aa8.81□□□□□ -1
CD46-208ENST00000367042 VPS72Q15906 364 aa8.81□□□□□ -1
CD46-208ENST00000367042 PPP2R5EQ16537 467 aa8.81□□□□□ -1
CD46-208ENST00000367042 DUPD1Q68J44 220 aa8.81□□□□□ -1
CD46-208ENST00000367042 RINT1Q6NUQ1 792 aa8.81□□□□□ -1
CD46-208ENST00000367042 FAM228AQ86W67 206 aa8.81□□□□□ -1
CD46-208ENST00000367042 KIAA0825Q8IV33 1275 aa8.81□□□□□ -1
CD46-208ENST00000367042 RASGEF1CQ8N431 466 aa8.81□□□□□ -1
CD46-208ENST00000367042 CTNNAL1Q9UBT7 734 aa8.81□□□□□ -1
CD46-208ENST00000367042 TRPC6Q9Y210 931 aa8.81□□□□□ -1
CD46-208ENST00000367042 PASKQ96RG2 1323 aa8.81□□□□□ -1
CD46-208ENST00000367042 TCRBV7S2A1N4TA0A589 114 aa8.8□□□□□ -1
CD46-208ENST00000367042 TMEM120BA0PK00 339 aa8.8□□□□□ -1
CD46-208ENST00000367042 ARHGEF35A5YM69 484 aa8.8□□□□□ -1
CD46-208ENST00000367042 FAM187AA6NFU0 413 aa8.8□□□□□ -1
CD46-208ENST00000367042 TISP43B9A030 160 aa8.8□□□□□ -1
CD46-208ENST00000367042 DDX3YO15523 660 aaKnown RBP8.8□□□□□ -1
CD46-208ENST00000367042 GAS7O60861 476 aa8.8□□□□□ -1
CD46-208ENST00000367042 DIAPH2O60879 1101 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms