RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 CTNND1O60716 968 aaKnown RBP28.59■■■□□ 2.17
CUEDC1-201ENST00000360238 TNFAIP3P21580 790 aa28.59■■■□□ 2.17
CUEDC1-201ENST00000360238 SLC35G2Q8TBE7 412 aa28.59■■■□□ 2.17
CUEDC1-201ENST00000360238 TAAR1Q96RJ0 339 aa28.59■■■□□ 2.17
CUEDC1-201ENST00000360238 ISCUQ9H1K1 167 aa28.59■■■□□ 2.17
CUEDC1-201ENST00000360238 TAF1DQ9H5J8 278 aaPredicted RBP28.59■■■□□ 2.17
CUEDC1-201ENST00000360238 EIF2AK2P19525 551 aaKnown RBP28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 CUL1Q13616 776 aa28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 ARHGAP44Q17R89 818 aa28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 EPC2Q52LR7 807 aa28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 HAUS6Q7Z4H7 955 aa28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 PCIF1Q9H4Z3 704 aa28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 HSPBP1Q9NZL4 362 aa28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 TTC7AQ9ULT0 858 aaPredicted RBP28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 BHMG1C9JSJ3 638 aaPredicted RBP28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 PMM2O15305 246 aa28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 FAM153BP0C7A2 387 aa28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 SFNP31947 248 aa28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 NCKAP1LP55160 1127 aa28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 PSMC5P62195 406 aa28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 DLG4P78352 724 aa28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 PPATQ06203 517 aa28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 FAM153CQ494X1 144 aa28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 ZIM3Q96PE6 472 aa28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 CBWD1Q9BRT8 395 aa28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 FAM153AQ9UHL3 310 aa28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 DIS3Q9Y2L1 958 aaKnown RBP28.58■■■□□ 2.17
CUEDC1-201ENST00000360238 ANKRD62A6NC57 917 aa28.57■■■□□ 2.16
CUEDC1-201ENST00000360238 BUB1BO60566 1050 aaPredicted RBP28.57■■■□□ 2.16
CUEDC1-201ENST00000360238 FDX1P10109 184 aa28.57■■■□□ 2.16
CUEDC1-201ENST00000360238 VCAM1P19320 739 aa28.57■■■□□ 2.16
CUEDC1-201ENST00000360238 IQCKQ8N0W5 287 aa28.57■■■□□ 2.16
CUEDC1-201ENST00000360238 OSGEPQ9NPF4 335 aa28.57■■■□□ 2.16
CUEDC1-201ENST00000360238 WDR64B1ANS9 1081 aa28.57■■■□□ 2.16
CUEDC1-201ENST00000360238 TISP43B9A030 160 aa28.57■■■□□ 2.16
CUEDC1-201ENST00000360238 ZNF280AP59817 542 aaPredicted RBP28.57■■■□□ 2.16
CUEDC1-201ENST00000360238 MCCD1P59942 119 aaPredicted RBP28.57■■■□□ 2.16
CUEDC1-201ENST00000360238 KRT76Q01546 638 aa28.57■■■□□ 2.16
CUEDC1-201ENST00000360238 UGCGQ16739 394 aa28.57■■■□□ 2.16
CUEDC1-201ENST00000360238 PDCD2LQ9BRP1 358 aa28.57■■■□□ 2.16
CUEDC1-201ENST00000360238 SLITRK6Q9H5Y7 841 aa28.57■■■□□ 2.16
CUEDC1-201ENST00000360238 ANKEF1Q9NU02 776 aa28.57■■■□□ 2.16
CUEDC1-201ENST00000360238 USP20Q9Y2K6 914 aa28.57■■■□□ 2.16
CUEDC1-201ENST00000360238 ARID2Q68CP9 1835 aa28.56■■■□□ 2.16
CUEDC1-201ENST00000360238 FOXN3O00409 490 aaPredicted RBP28.56■■■□□ 2.16
CUEDC1-201ENST00000360238 BACH1O14867 736 aa28.56■■■□□ 2.16
CUEDC1-201ENST00000360238 PPP3CAQ08209 521 aa28.56■■■□□ 2.16
CUEDC1-201ENST00000360238 PTPROQ16827 1216 aa28.56■■■□□ 2.16
CUEDC1-201ENST00000360238 CFAP58Q5T655 872 aa28.56■■■□□ 2.16
CUEDC1-201ENST00000360238 LRRC31Q6UY01 552 aa28.56■■■□□ 2.16
CUEDC1-201ENST00000360238 AGPAT1Q99943 283 aa28.56■■■□□ 2.16
CUEDC1-201ENST00000360238 PXMP2Q9NR77 195 aa28.56■■■□□ 2.16
CUEDC1-201ENST00000360238 CTDP1Q9Y5B0 961 aaPredicted RBP28.56■■■□□ 2.16
CUEDC1-201ENST00000360238 IGSF9BQ9UPX0 1349 aa28.56■■■□□ 2.16
CUEDC1-201ENST00000360238 KRIT1O00522 736 aa28.55■■■□□ 2.16
CUEDC1-201ENST00000360238 ZBED4O75132 1171 aa28.55■■■□□ 2.16
CUEDC1-201ENST00000360238 LRRN2O75325 713 aa28.55■■■□□ 2.16
CUEDC1-201ENST00000360238 ERVK-9P63128 1117 aa28.55■■■□□ 2.16
CUEDC1-201ENST00000360238 C1orf220Q5T0J3 134 aa28.55■■■□□ 2.16
CUEDC1-201ENST00000360238 RMDN3Q96TC7 470 aa28.55■■■□□ 2.16
CUEDC1-201ENST00000360238 SART1O43290 800 aaKnown RBP28.55■■■□□ 2.16
CUEDC1-201ENST00000360238 HADHBP55084 474 aaKnown RBP28.55■■■□□ 2.16
CUEDC1-201ENST00000360238 RNF207Q6ZRF8 634 aa28.55■■■□□ 2.16
CUEDC1-201ENST00000360238 CD302Q8IX05 232 aa28.55■■■□□ 2.16
CUEDC1-201ENST00000360238 RDM1Q8NG50 284 aa28.55■■■□□ 2.16
CUEDC1-201ENST00000360238 HVCN1Q96D96 273 aa28.55■■■□□ 2.16
CUEDC1-201ENST00000360238 PLEKHA4Q9H4M7 779 aa28.55■■■□□ 2.16
CUEDC1-201ENST00000360238 UBE2TQ9NPD8 197 aaPredicted RBP28.55■■■□□ 2.16
CUEDC1-201ENST00000360238 TCEAL9Q9UHQ7 104 aa28.55■■■□□ 2.16
CUEDC1-201ENST00000360238 ABCB4P21439 1286 aa28.54■■■□□ 2.16
CUEDC1-201ENST00000360238 HSPA9P38646 679 aaKnown RBP28.54■■■□□ 2.16
CUEDC1-201ENST00000360238 DGKZQ13574 1117 aa28.54■■■□□ 2.16
CUEDC1-201ENST00000360238 XRRA1Q6P2D8 792 aa28.54■■■□□ 2.16
CUEDC1-201ENST00000360238 RHOT2Q8IXI1 618 aa28.54■■■□□ 2.16
CUEDC1-201ENST00000360238 AP1M1Q9BXS5 423 aa28.54■■■□□ 2.16
CUEDC1-201ENST00000360238 EXOC7Q9UPT5 735 aa28.54■■■□□ 2.16
CUEDC1-201ENST00000360238 COL11A1P12107 1806 aaPredicted RBP28.54■■■□□ 2.16
CUEDC1-201ENST00000360238 MYCLP12524 364 aaPredicted RBP28.54■■■□□ 2.16
CUEDC1-201ENST00000360238 MTMR2Q13614 643 aa28.54■■■□□ 2.16
CUEDC1-201ENST00000360238 TTMPQ5BVD1 217 aa28.54■■■□□ 2.16
CUEDC1-201ENST00000360238 ARHGEF19Q8IW93 802 aa28.54■■■□□ 2.16
CUEDC1-201ENST00000360238 JDP2Q8WYK2 163 aa28.54■■■□□ 2.16
CUEDC1-201ENST00000360238 TRERF1Q96PN7 1200 aa28.54■■■□□ 2.16
CUEDC1-201ENST00000360238 SEPT11Q9NVA2 429 aaKnown RBP28.54■■■□□ 2.16
CUEDC1-201ENST00000360238 SCAF8Q9UPN6 1271 aaKnown RBP28.54■■■□□ 2.16
CUEDC1-201ENST00000360238 CCNE2O96020 404 aa28.53■■■□□ 2.16
CUEDC1-201ENST00000360238 GCLMP48507 274 aa28.53■■■□□ 2.16
CUEDC1-201ENST00000360238 MXI1P50539 228 aa28.53■■■□□ 2.16
CUEDC1-201ENST00000360238 GUCY2FP51841 1108 aa28.53■■■□□ 2.16
CUEDC1-201ENST00000360238 PEX3P56589 373 aa28.53■■■□□ 2.16
CUEDC1-201ENST00000360238 TCEAL1Q15170 157 aa28.53■■■□□ 2.16
CUEDC1-201ENST00000360238 ARHGEF26Q96DR7 871 aa28.53■■■□□ 2.16
CUEDC1-201ENST00000360238 THAP2Q9H0W7 228 aa28.53■■■□□ 2.16
CUEDC1-201ENST00000360238 RPAP3Q9H6T3 665 aaPredicted RBP28.53■■■□□ 2.16
CUEDC1-201ENST00000360238 KIAA1217Q5T5P2 1943 aa28.53■■■□□ 2.16
CUEDC1-201ENST00000360238 SLC16A4O15374 487 aa28.52■■■□□ 2.16
CUEDC1-201ENST00000360238 DDX3YO15523 660 aaKnown RBP28.52■■■□□ 2.16
CUEDC1-201ENST00000360238 ECHS1P30084 290 aa28.52■■■□□ 2.16
CUEDC1-201ENST00000360238 PALB2Q86YC2 1186 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms