RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 CCDC47Q96A33 483 aaKnown RBP27.98■■■□□ 2.07
SSBP3-202ENST00000357475 STRA6Q9BX79 667 aa27.98■■■□□ 2.07
SSBP3-202ENST00000357475 TBX21Q9UL17 535 aa27.98■■■□□ 2.07
SSBP3-202ENST00000357475 TRPV2Q9Y5S1 764 aa27.98■■■□□ 2.07
SSBP3-202ENST00000357475 SCN5AQ14524 2016 aa27.98■■■□□ 2.07
SSBP3-202ENST00000357475 DENND3A2RUS2 1198 aa27.97■■■□□ 2.07
SSBP3-202ENST00000357475 PRPF6O94906 941 aaKnown RBP27.97■■■□□ 2.07
SSBP3-202ENST00000357475 MAPTP10636 758 aaKnown RBP27.97■■■□□ 2.07
SSBP3-202ENST00000357475 CD44P16070 742 aaKnown RBP27.97■■■□□ 2.07
SSBP3-202ENST00000357475 EPM2AIP1Q7L775 607 aaPredicted RBP27.97■■■□□ 2.07
SSBP3-202ENST00000357475 SCFD1Q8WVM8 642 aa27.97■■■□□ 2.07
SSBP3-202ENST00000357475 NOC4LQ9BVI4 516 aaKnown RBP27.97■■■□□ 2.07
SSBP3-202ENST00000357475 CLTBP09497 229 aa27.97■■■□□ 2.07
SSBP3-202ENST00000357475 HOXD13P35453 343 aa27.97■■■□□ 2.07
SSBP3-202ENST00000357475 SMTNP53814 917 aa27.97■■■□□ 2.07
SSBP3-202ENST00000357475 MBTD1Q05BQ5 628 aa27.97■■■□□ 2.07
SSBP3-202ENST00000357475 RBL2Q08999 1139 aa27.97■■■□□ 2.07
SSBP3-202ENST00000357475 PSMD2Q13200 908 aa27.97■■■□□ 2.07
SSBP3-202ENST00000357475 MBTPS1Q14703 1052 aa27.97■■■□□ 2.07
SSBP3-202ENST00000357475 DPCR1Q3MIW9 517 aa27.97■■■□□ 2.07
SSBP3-202ENST00000357475 FAM26DQ5JW98 314 aa27.97■■■□□ 2.07
SSBP3-202ENST00000357475 ZNF410Q86VK4 478 aa27.97■■■□□ 2.07
SSBP3-202ENST00000357475 PPP1R12CQ9BZL4 782 aa27.97■■■□□ 2.07
SSBP3-202ENST00000357475 CCDC113Q9H0I3 377 aa27.97■■■□□ 2.07
SSBP3-202ENST00000357475 TTLL13PA6NNM8 815 aa27.96■■■□□ 2.07
SSBP3-202ENST00000357475 PHKA2P46019 1235 aa27.96■■■□□ 2.07
SSBP3-202ENST00000357475 CRYBB1P53674 252 aaPredicted RBP27.96■■■□□ 2.07
SSBP3-202ENST00000357475 CAGE1Q8TC20 777 aa27.96■■■□□ 2.07
SSBP3-202ENST00000357475 TMEM39AQ9NV64 488 aa27.96■■■□□ 2.07
SSBP3-202ENST00000357475 TRIM43BA6NCK2 446 aa27.95■■■□□ 2.06
SSBP3-202ENST00000357475 DARSP14868 501 aaKnown RBP27.95■■■□□ 2.06
SSBP3-202ENST00000357475 PRCPP42785 496 aa27.95■■■□□ 2.06
SSBP3-202ENST00000357475 GTF2BQ00403 316 aa27.95■■■□□ 2.06
SSBP3-202ENST00000357475 IFNLR1Q8IU57 520 aaPredicted RBP27.95■■■□□ 2.06
SSBP3-202ENST00000357475 TRIML1Q8N9V2 468 aa27.95■■■□□ 2.06
SSBP3-202ENST00000357475 TRIM43Q96BQ3 446 aaPredicted RBP27.95■■■□□ 2.06
SSBP3-202ENST00000357475 FUCA2Q9BTY2 467 aa27.95■■■□□ 2.06
SSBP3-202ENST00000357475 NFKBIZQ9BYH8 718 aa27.95■■■□□ 2.06
SSBP3-202ENST00000357475 WNT8AQ9H1J5 351 aa27.95■■■□□ 2.06
SSBP3-202ENST00000357475 HIPK3Q9H422 1215 aa27.95■■■□□ 2.06
SSBP3-202ENST00000357475 ST6GALNAC4Q9H4F1 302 aa27.95■■■□□ 2.06
SSBP3-202ENST00000357475 ITGB8P26012 769 aa27.94■■■□□ 2.06
SSBP3-202ENST00000357475 CYP2C18P33260 490 aa27.94■■■□□ 2.06
SSBP3-202ENST00000357475 NLRP12P59046 1061 aa27.94■■■□□ 2.06
SSBP3-202ENST00000357475 POU5F1BQ06416 359 aa27.94■■■□□ 2.06
SSBP3-202ENST00000357475 LRRC8DQ7L1W4 858 aa27.94■■■□□ 2.06
SSBP3-202ENST00000357475 NELFCDQ8IXH7 590 aa27.94■■■□□ 2.06
SSBP3-202ENST00000357475 GCOM2Q9BZD3 368 aaPredicted RBP27.94■■■□□ 2.06
SSBP3-202ENST00000357475 INO80B-WBP1J3KQ70 363 aa27.93■■■□□ 2.06
SSBP3-202ENST00000357475 M0QZ92 97 aa27.93■■■□□ 2.06
SSBP3-202ENST00000357475 CAND2O75155 1236 aa27.93■■■□□ 2.06
SSBP3-202ENST00000357475 EIF4BP23588 611 aaKnown RBP27.93■■■□□ 2.06
SSBP3-202ENST00000357475 BFSP2Q13515 415 aa27.93■■■□□ 2.06
SSBP3-202ENST00000357475 GPNMBQ14956 572 aa27.93■■■□□ 2.06
SSBP3-202ENST00000357475 SASS6Q6UVJ0 657 aa27.93■■■□□ 2.06
SSBP3-202ENST00000357475 ZBTB8OSQ8IWT0 167 aa27.93■■■□□ 2.06
SSBP3-202ENST00000357475 INO80BQ9C086 356 aaPredicted RBP27.93■■■□□ 2.06
SSBP3-202ENST00000357475 PRDM5Q9NQX1 630 aaPredicted RBP27.93■■■□□ 2.06
SSBP3-202ENST00000357475 TBX20Q9UMR3 447 aa27.93■■■□□ 2.06
SSBP3-202ENST00000357475 NOC2LQ9Y3T9 749 aaKnown RBP27.93■■■□□ 2.06
SSBP3-202ENST00000357475 ZMYM2Q9UBW7 1377 aa27.93■■■□□ 2.06
SSBP3-202ENST00000357475 PHLPP2Q6ZVD8 1323 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 PPP1R3GB7ZBB8 358 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 B4GALT5O43286 388 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 RPLP2P05387 115 aaKnown RBP27.92■■■□□ 2.06
SSBP3-202ENST00000357475 SELPP16109 830 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 CCL23P55773 120 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 CDC42EP1Q00587 391 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 TYRO3Q06418 890 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 AMHR2Q16671 573 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 ZNF507Q8TCN5 953 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 SCLYQ96I15 445 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 C2orf40Q9H1Z8 148 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 TMEM134Q9H6X4 195 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 AGO3Q9H9G7 860 aaKnown RBP27.92■■■□□ 2.06
SSBP3-202ENST00000357475 K7ERI5 159 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 PITPNM1O00562 1244 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 LETM1O95202 739 aaPredicted RBP27.92■■■□□ 2.06
SSBP3-202ENST00000357475 GHRP10912 638 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 LPIN1Q14693 890 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 FBXO47Q5MNV8 452 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 L1TD1Q5T7N2 865 aaKnown RBP27.92■■■□□ 2.06
SSBP3-202ENST00000357475 SRGAP1Q7Z6B7 1085 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 FAM228AQ86W67 206 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 ADSSL1Q8N142 457 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 CCDC155Q8N6L0 562 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 FZD8Q9H461 694 aa27.92■■■□□ 2.06
SSBP3-202ENST00000357475 TISP43B9A030 160 aa27.91■■■□□ 2.06
SSBP3-202ENST00000357475 PRKCBP05771 671 aa27.91■■■□□ 2.06
SSBP3-202ENST00000357475 EFNA5P52803 228 aa27.91■■■□□ 2.06
SSBP3-202ENST00000357475 C7orf61Q8IZ16 206 aa27.91■■■□□ 2.06
SSBP3-202ENST00000357475 MYOCDQ8IZQ8 938 aa27.91■■■□□ 2.06
SSBP3-202ENST00000357475 PCDHB13Q9Y5F0 798 aa27.91■■■□□ 2.06
SSBP3-202ENST00000357475 TET1Q8NFU7 2136 aa27.9■■■□□ 2.06
SSBP3-202ENST00000357475 EIF3DO15371 548 aaKnown RBP eCLIP27.9■■■□□ 2.06
SSBP3-202ENST00000357475 BMT2Q1RMZ1 405 aa27.9■■■□□ 2.06
SSBP3-202ENST00000357475 C11orf57Q6ZUT1 292 aaPredicted RBP27.9■■■□□ 2.06
SSBP3-202ENST00000357475 MAP4K3Q8IVH8 894 aa27.9■■■□□ 2.06
SSBP3-202ENST00000357475 KCNN1Q92952 543 aa27.9■■■□□ 2.06
SSBP3-202ENST00000357475 KCNG1Q9UIX4 513 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms