RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 DLG3Q92796 817 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 HDAC11Q96DB2 347 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 EYA1Q99502 592 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 NLRC4Q9NPP4 1024 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 WHRNQ9P202 907 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 SUCLA2Q9P2R7 463 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-202ENST00000357162 PPARGC1AQ9UBK2 798 aaKnown RBP6.98□□□□□ -1.29
VPS13B-202ENST00000357162 KLRF2D3W0D1 207 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 COPS2P61201 443 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 MRPL28Q13084 256 aaKnown RBP6.98□□□□□ -1.29
VPS13B-202ENST00000357162 SCYL1Q96KG9 808 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 OLFM1Q99784 485 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 CEP44Q9C0F1 390 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 IRAK4Q9NWZ3 460 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 CIDEBQ9UHD4 219 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 NOVA2Q9UNW9 492 aaKnown RBP6.98□□□□□ -1.29
VPS13B-202ENST00000357162 IGSF1Q8N6C5 1336 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 CALB2P22676 271 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 MYL6P60660 151 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 ODR4Q5SWX8 454 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 PLEKHF1Q96S99 279 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 DBNLQ9UJU6 430 aaKnown RBP6.98□□□□□ -1.29
VPS13B-202ENST00000357162 EFCAB6Q5THR3 1501 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 RNF103-CHMP3A0A140T963 221 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 AHCYL1O43865 530 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 PRPSAP2O60256 369 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 MUTP22033 750 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 PMS2P54278 862 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 BNC1Q01954 994 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 E2F5Q15329 346 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 PALB2Q86YC2 1186 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 JDP2Q8WYK2 163 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 ZNF512BQ96KM6 892 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-202ENST00000357162 APOL4Q9BPW4 351 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 PRDM16Q9HAZ2 1276 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 SESN1Q9Y6P5 492 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 PNMA8CA0A1B0GUJ8 204 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 GNGT2O14610 69 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 KRT14P02533 472 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 POLR2MP0CAP2 368 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 PMLP29590 882 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 RPL22P35268 128 aaKnown RBP6.98□□□□□ -1.29
VPS13B-202ENST00000357162 FMR1NBQ8N0W7 255 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-202ENST00000357162 TRPC4APQ8TEL6 797 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 LIMA1Q9UHB6 759 aaKnown RBP6.98□□□□□ -1.29
VPS13B-202ENST00000357162 PNPLA6Q8IY17 1366 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 SLCO1B7G3V0H7 640 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 K7ENM7 598 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 CYTH3O43739 400 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 LDHAP00338 332 aaKnown RBP6.97□□□□□ -1.29
VPS13B-202ENST00000357162 IRAK1P51617 712 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 DBNDD2Q9BQY9 259 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 ISCUQ9H1K1 167 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 WARS2Q9UGM6 360 aaKnown RBP6.97□□□□□ -1.29
VPS13B-202ENST00000357162 SOWAHDA6NJG2 315 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 FAM25AB3EWG3 89 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 FAM25CB3EWG5 89 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 FAM25GB3EWG6 89 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 CBFA2T3O75081 653 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 TXKP42681 527 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 PAPOLAP51003 745 aaKnown RBP6.97□□□□□ -1.29
VPS13B-202ENST00000357162 WLSQ5T9L3 541 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 RBM17Q96I25 401 aaKnown RBP6.97□□□□□ -1.29
VPS13B-202ENST00000357162 FAM20AQ96MK3 541 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 TEKT3Q9BXF9 490 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 ECT2Q9H8V3 914 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 ASNSD1Q9NWL6 643 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 PCDHA1Q9Y5I3 950 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 ACTL7BQ9Y614 415 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 TNPO2O14787 897 aaKnown RBP6.97□□□□□ -1.29
VPS13B-202ENST00000357162 FKBP6O75344 327 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 KCNA3P22001 575 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 JAK3P52333 1124 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 GPC5P78333 572 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 RASSF3Q86WH2 238 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 MREGQ8N565 214 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 CNOT7Q9UIV1 285 aaKnown RBP6.97□□□□□ -1.29
VPS13B-202ENST00000357162 POLR2FP61218 127 aaKnown RBP6.97□□□□□ -1.29
VPS13B-202ENST00000357162 CENPTQ96BT3 561 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 CCDC126Q96EE4 140 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 MRPS26Q9BYN8 205 aaKnown RBP6.97□□□□□ -1.29
VPS13B-202ENST00000357162 IP6K2Q9UHH9 426 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 TM9SF1O15321 606 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 FAM160B1Q5W0V3 765 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 NXNQ6DKJ4 435 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 SPINK5Q9NQ38 1064 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-202ENST00000357162 L3MBTL1Q9Y468 752 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 ITSN1Q15811 1721 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 CNTFP26441 200 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 MRPS15P82914 257 aaKnown RBP6.97□□□□□ -1.29
VPS13B-202ENST00000357162 TRIM16LQ309B1 348 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 ARMCX2Q7L311 632 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 SLC12A6Q9UHW9 1150 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 TRPC5OSA6NMA1 111 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 ERVV-1B6SEH8 477 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 DCTN2Q13561 401 aaKnown RBP6.97□□□□□ -1.29
VPS13B-202ENST00000357162 CCDC85AQ96PX6 553 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-202ENST00000357162 SGK1O00141 431 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 TMEM191BP0C7N4 346 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 COPAP53621 1224 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms