RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 ATP8B3O60423 1300 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 A0A1B0GW55 424 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 GOLGA8RI6L899 631 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 NEMP1O14524 444 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 XPOTO43592 962 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 KRT38O76015 456 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 DUX4L2P0CJ85 424 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 DUX4L3P0CJ86 424 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 DUX4L4P0CJ87 422 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 DUX4L5P0CJ88 424 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 DUX4L6P0CJ89 424 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 DUX4L7P0CJ90 424 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 MTERF2Q49AM1 385 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 CEP170P1Q96L14 293 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 SMAD5Q99717 465 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 NFKBIL1Q9UBC1 381 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 DUX4Q9UBX2 424 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 EIF4G3O43432 1585 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 HSPA9P38646 679 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 SNAP25P60880 206 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 LRRC24Q50LG9 513 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 ANKMY2Q8IV38 441 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 CCND2P30279 289 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 KCNJ6P48051 423 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 ZNF394Q53GI3 561 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 SYCP2LQ5T4T6 812 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 CLEC4FQ8N1N0 589 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 COA7Q96BR5 231 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 COQ7Q99807 217 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 SESN1Q9Y6P5 492 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 MEFVO15553 781 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 SMARCA1P28370 1054 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 HSPA2P54652 639 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 KIF23Q02241 960 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 PPP1R2P3Q6NXS1 205 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 ALKBH5Q6P6C2 394 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 HEATR4Q86WZ0 1026 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 ABI1Q8IZP0 508 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 VPS39Q96JC1 886 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 NUP85Q9BW27 656 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 CCDC188H7C350 402 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 ARIH2O95376 493 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 LRRC8BQ6P9F7 803 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 C1orf228Q6PIY5 440 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 PHF21AQ96BD5 680 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 ZNF212Q9UDV6 495 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 MKL2Q9ULH7 1088 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 TRIM49BA6NDI0 452 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 IMPDH2P12268 514 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 PSMD7P51665 324 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 PLOD1Q02809 727 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 NR1H3Q13133 447 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 SNF8Q96H20 258 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 BATF3Q9NR55 127 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 GCFC2P16383 781 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 MARK3P27448 753 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 KLC1Q07866 573 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 TCIRG1Q13488 830 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 CTTNQ14247 550 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 TRIM25Q14258 630 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 LUZP2Q86TE4 346 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 KIF2CQ99661 725 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 EGFL8Q99944 293 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 EPN3Q9H201 632 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 NGRNQ9NPE2 291 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 SLC5A4Q9NY91 659 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 CCDC22O60826 627 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 SERPINB1P30740 379 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 MXI1P50539 228 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 FASTKD1Q53R41 847 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 SPATA21Q7Z572 469 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 COG1Q8WTW3 980 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 SCG3Q8WXD2 468 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 TAF1DQ9H5J8 278 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 EML4Q9HC35 981 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 CSADQ9Y600 493 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 MAGI3Q5TCQ9 1506 aa11.71□□□□□ -0.53
GTF3C1-201ENST00000356183 ADORA1P30542 326 aa11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 MED21Q13503 144 aa11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 INPP5AQ14642 412 aa11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 TLK2Q86UE8 772 aa11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 ZNF589Q86UQ0 364 aaPredicted RBP11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 RHOT2Q8IXI1 618 aa11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 IP6K1Q92551 441 aa11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 RNF25Q96BH1 459 aaPredicted RBP11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 ADAM33Q9BZ11 813 aa11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 GCOM2Q9BZD3 368 aaPredicted RBP11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 PARVGQ9HBI0 331 aa11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 SYNMO15061 1565 aa11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 SERPINB4P48594 390 aa11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 CORO7P57737 925 aa11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 HDDC2Q7Z4H3 204 aa11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 C11orf74Q86VG3 221 aa11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 NIM1KQ8IY84 436 aa11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 RPF1Q9H9Y2 349 aaKnown RBP11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 USE1Q9NZ43 259 aa11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 DNAJC12Q9UKB3 198 aa11.71□□□□□ -0.54
GTF3C1-201ENST00000356183 TCN1P20061 433 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 USP14P54578 494 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms