RNA–Protein interactions for RNA: ENST00000354504.7

VPS54-202, Transcript of VPS54, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS54, Length 3,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-202ENST00000354504 CEP89Q96ST8 783 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 ZFP64Q9NPA5 681 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 SH3GLB2Q9NR46 395 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 DISC1Q9NRI5 854 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 CNNM1Q9NRU3 951 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 BARHL2Q9NY43 387 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 SUGT1Q9Y2Z0 365 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 PPME1Q9Y570 386 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 SPEGQ15772 3267 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 NYNRINQ9P2P1 1898 aaKnown RBP2.65□□□□□ -1.99
VPS54-202ENST00000354504 GOLGA8BA8MQT2 603 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 TMEM232C9JQI7 657 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 IKBKBO14920 756 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 ZNF202O95125 648 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 STBD1O95210 358 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 ADCY5O95622 1261 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 PRNPP04156 253 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 APPP05067 770 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 VIL1P09327 827 aaKnown RBP2.65□□□□□ -1.99
VPS54-202ENST00000354504 ZKSCAN1P17029 563 aaPredicted RBP2.65□□□□□ -1.99
VPS54-202ENST00000354504 CASP1P29466 404 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 CAP2P40123 477 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 KCNJ6P48051 423 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 TERF1P54274 439 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 EIF6P56537 245 aaKnown RBP2.65□□□□□ -1.99
VPS54-202ENST00000354504 LRMPQ12912 555 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 AP3B2Q13367 1082 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 LRRC14Q15048 493 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 TMEM119Q4V9L6 283 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 FAM47AQ5JRC9 791 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 KRBA2Q6ZNG9 492 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 KIAA1211Q6ZU35 1233 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 KCNK18Q7Z418 384 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 GRAMD1CQ8IYS0 662 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 ZNF513Q8N8E2 541 aaPredicted RBP2.65□□□□□ -1.99
VPS54-202ENST00000354504 ETNPPLQ8TBG4 499 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 CPLX3Q8WVH0 158 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 EPSTI1Q96J88 318 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 EXOC2Q96KP1 924 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 PLVAPQ9BX97 442 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 ANKRD2Q9GZV1 360 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 CSRNP2Q9H175 543 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 GSX1Q9H4S2 264 aaPredicted RBP2.65□□□□□ -1.99
VPS54-202ENST00000354504 KCNMB3Q9NPA1 279 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 KLHL42Q9P2K6 505 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 ARPP21Q9UBL0 812 aaPredicted RBP2.65□□□□□ -1.99
VPS54-202ENST00000354504 MAN1B1Q9UKM7 699 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 SAMM50Q9Y512 469 aa2.65□□□□□ -1.99
VPS54-202ENST00000354504 ZNF106Q9H2Y7 1883 aaKnown RBP2.64□□□□□ -1.99
VPS54-202ENST00000354504 ANAPC1Q9H1A4 1944 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 CITO14578 2027 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 A0A0A0MRY4 1105 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 ESYT2A0FGR8 921 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 WASH4PA8MWX3 477 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 ARNTLO00327 626 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 TMPRSS2O15393 492 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 FIBPO43427 364 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 SLC37A4O43826 429 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 BBOX1O75936 387 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 TP53P04637 393 aaPredicted RBP2.64□□□□□ -1.99
VPS54-202ENST00000354504 FAM153BP0C7A2 387 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 AKR1B1P15121 316 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 CYP7A1P22680 504 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 NT5C2P49902 561 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 GUCY1B3Q02153 619 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 SPP2Q13103 211 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 OS9Q13438 667 aaPredicted RBP2.64□□□□□ -1.99
VPS54-202ENST00000354504 PNOCQ13519 176 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 TTLL4Q14679 1199 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 ZSCAN25Q6NSZ9 544 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 WDR59Q6PJI9 974 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 CYFIP1Q7L576 1253 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 EPM2AIP1Q7L775 607 aaPredicted RBP2.64□□□□□ -1.99
VPS54-202ENST00000354504 CCAR1Q8IX12 1150 aaKnown RBP2.64□□□□□ -1.99
VPS54-202ENST00000354504 C19orf47Q8N9M1 422 aaKnown RBP2.64□□□□□ -1.99
VPS54-202ENST00000354504 TC2NQ8N9U0 490 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 SYTL4Q96C24 671 aaPredicted RBP2.64□□□□□ -1.99
VPS54-202ENST00000354504 DNAJC19Q96DA6 116 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 CEP95Q96GE4 821 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 SYT11Q9BT88 431 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 SCAND2PQ9GZW5 306 aaPredicted RBP2.64□□□□□ -1.99
VPS54-202ENST00000354504 CPVLQ9H3G5 476 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 TSPY26PQ9H489 355 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 CNNM2Q9H8M5 875 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 JMJD4Q9H9V9 463 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 MTMR4Q9NYA4 1195 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 WRAP73Q9P2S5 460 aaPredicted RBP2.64□□□□□ -1.99
VPS54-202ENST00000354504 ADAMTS5Q9UNA0 930 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 hCG_1642624A0A1W2PR95 340 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 AOC2O75106 756 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 LRRN2O75325 713 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 IDH1O75874 414 aaKnown RBP2.64□□□□□ -1.99
VPS54-202ENST00000354504 TAL1P17542 331 aaPredicted RBP2.64□□□□□ -1.99
VPS54-202ENST00000354504 METAP2P50579 478 aaKnown RBP eCLIP2.64□□□□□ -1.99
VPS54-202ENST00000354504 GRB10Q13322 594 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 SLBPQ14493 270 aaKnown RBP eCLIP2.64□□□□□ -1.99
VPS54-202ENST00000354504 SLC15A2Q16348 729 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 CAMK4Q16566 473 aa2.64□□□□□ -1.99
VPS54-202ENST00000354504 ASTE1Q2TB18 679 aaPredicted RBP2.64□□□□□ -1.99
VPS54-202ENST00000354504 LHFPL2Q6ZUX7 228 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms