RNA–Protein interactions for RNA: ENST00000353855.6

DNMT3B-204, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 5 BASIC

Gene DNMT3B, Length 4,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-204ENST00000353855 RFC1P35251 1148 aaPredicted RBP15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 NSFP46459 744 aaKnown RBP15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 PPP2R5CQ13362 524 aa15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 CASC4Q6P4E1 433 aa15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 PPP4R3CPQ6ZMV5 832 aa15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 CD302Q8IX05 232 aa15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 CCDC87Q9NVE4 849 aa15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 NDE1Q9NXR1 346 aa15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 CASQ2O14958 399 aaPredicted RBP15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 ASAP2O43150 1006 aa15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 GAS7O60861 476 aa15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 PGM1P36871 562 aa15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 MKRN3Q13064 507 aaKnown RBP15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 HSP90AA5PQ58FG0 334 aa15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 BSPRYQ5W0U4 402 aa15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 OLFML2BQ68BL8 750 aa15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 CENPPQ6IPU0 288 aa15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 ZNF571Q7Z3V5 609 aaPredicted RBP15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 JDP2Q8WYK2 163 aa15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 GINM1Q9NU53 330 aa15.22■□□□□ 0.03
DNMT3B-204ENST00000353855 USP17L5A8MUK1 530 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 USP17L15C9J2P7 530 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 USP17L13C9JLJ4 530 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 USP17L11C9JVI0 530 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 USP17L18D6R9N7 530 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 USP17L22D6RA61 530 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 USP17L17D6RBQ6 530 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 USP17L19D6RCP7 530 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 USP17L20D6RJB6 530 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 CAPN9O14815 690 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 ATMINO43313 823 aaPredicted RBP15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 PHF2O75151 1096 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 MAN1A1P33908 653 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 USP17L24Q0WX57 530 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 MAPK7Q13164 816 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 USP17L6PQ6QN14 398 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 SLFN12Q8IYM2 578 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 OGFOD1Q8N543 542 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 IFT122Q9HBG6 1241 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 SUCLA2Q9P2R7 463 aaPredicted RBP15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 SALL4Q9UJQ4 1053 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 RTCBQ9Y3I0 505 aaKnown RBP15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 AGLP35573 1532 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 KDSRQ06136 332 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 OVGP1Q12889 678 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 TPTE2Q6XPS3 522 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 RGS9BPQ6ZS82 235 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 COL23A1Q86Y22 540 aaPredicted RBP15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 ACTRT1Q8TDG2 376 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 KLF6Q99612 283 aaPredicted RBP15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 TRABDQ9H4I3 376 aa15.21■□□□□ 0.03
DNMT3B-204ENST00000353855 NOL3O60936 208 aaKnown RBP15.21■□□□□ 0.02
DNMT3B-204ENST00000353855 CDH16O75309 829 aa15.21■□□□□ 0.02
DNMT3B-204ENST00000353855 GCLMP48507 274 aa15.21■□□□□ 0.02
DNMT3B-204ENST00000353855 ERMARDQ5T6L9 678 aa15.21■□□□□ 0.02
DNMT3B-204ENST00000353855 LGSNQ5TDP6 509 aa15.21■□□□□ 0.02
DNMT3B-204ENST00000353855 ARMC3Q5W041 872 aa15.21■□□□□ 0.02
DNMT3B-204ENST00000353855 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.21■□□□□ 0.02
DNMT3B-204ENST00000353855 SNRNP27Q8WVK2 155 aaKnown RBP15.21■□□□□ 0.02
DNMT3B-204ENST00000353855 GGA2Q9UJY4 613 aa15.21■□□□□ 0.02
DNMT3B-204ENST00000353855 GOLGA8IPA6NC78 632 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 GOLGA8JA6NMD2 632 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 TNNI1P19237 187 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 ATP4AP20648 1035 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 SOX5P35711 763 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 BTDP43251 543 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 TCP10Q12799 353 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 XRCC4Q13426 336 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 MAP7D1Q3KQU3 841 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 ZNF564Q8TBZ8 553 aaPredicted RBP15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 SREK1Q8WXA9 508 aaKnown RBP15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 NUP85Q9BW27 656 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 IFT172Q9UG01 1749 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 CTTNQ14247 550 aaKnown RBP15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 PYROXD1Q8WU10 500 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 TSNARE1Q96NA8 513 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 MTRQ99707 1265 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 TUBB6Q9BUF5 446 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 FAM47DPA6NHR8 397 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 KRT16P08779 473 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 FNTAP49354 379 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 IZUMO3Q5VZ72 239 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 RASSF3Q86WH2 238 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 RNF25Q96BH1 459 aaPredicted RBP15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 C2CD2Q9Y426 696 aa15.2■□□□□ 0.02
DNMT3B-204ENST00000353855 UFL1O94874 794 aa15.19■□□□□ 0.02
DNMT3B-204ENST00000353855 VHLP40337 213 aa15.19■□□□□ 0.02
DNMT3B-204ENST00000353855 SEMA3FQ13275 785 aa15.19■□□□□ 0.02
DNMT3B-204ENST00000353855 NME8Q8N427 588 aa15.19■□□□□ 0.02
DNMT3B-204ENST00000353855 MREGQ8N565 214 aa15.19■□□□□ 0.02
DNMT3B-204ENST00000353855 HIC2Q96JB3 615 aa15.19■□□□□ 0.02
DNMT3B-204ENST00000353855 Q9H521 79 aa15.19■□□□□ 0.02
DNMT3B-204ENST00000353855 CYP4F11Q9HBI6 524 aa15.19■□□□□ 0.02
DNMT3B-204ENST00000353855 PPP2R5DQ14738 602 aa15.19■□□□□ 0.02
DNMT3B-204ENST00000353855 GRM4Q14833 912 aa15.19■□□□□ 0.02
DNMT3B-204ENST00000353855 SEC23AQ15436 765 aa15.19■□□□□ 0.02
DNMT3B-204ENST00000353855 ZYXQ15942 572 aaKnown RBP15.19■□□□□ 0.02
DNMT3B-204ENST00000353855 NAALADL2Q58DX5 795 aa15.19■□□□□ 0.02
DNMT3B-204ENST00000353855 SLC26A7Q8TE54 656 aa15.19■□□□□ 0.02
DNMT3B-204ENST00000353855 RPS6KC1Q96S38 1066 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms