RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ZNF496Q96IT1 587 aaPredicted RBP14.22□□□□□ -0.13
IFT88-202ENST00000351808 USP40Q9NVE5 1235 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 CLIC5Q9NZA1 410 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 WASF2Q9Y6W5 498 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 DDX3XO00571 662 aaKnown RBP eCLIP14.21□□□□□ -0.131e-6■■■□□ 16.8
IFT88-202ENST00000351808 RAD21O60216 631 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 DNAJC3Q13217 504 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 ZCWPW2Q504Y3 356 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 TAF1BQ53T94 588 aaPredicted RBP14.21□□□□□ -0.13
IFT88-202ENST00000351808 ALKBH5Q6P6C2 394 aaKnown RBP14.21□□□□□ -0.13
IFT88-202ENST00000351808 TOM1L2Q6ZVM7 507 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 IP6K1Q92551 441 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 SPOCK2Q92563 424 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 ZNF653Q96CK0 615 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 HAUS1Q96CS2 278 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 CORO1BQ9BR76 489 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 CCSER1Q9C0I3 900 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 SH3GLB1Q9Y371 365 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 FAM170AA1A519 330 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 FAM187AA6NFU0 413 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 E2F6O75461 281 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 OR6B1O95007 311 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 PAX3P23760 479 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 PPP1R2P41236 205 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 MAPK7Q13164 816 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 EXOC3L4Q17RC7 722 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 LRRC55Q6ZSA7 311 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 NCCRP1Q6ZVX7 275 aaPredicted RBP14.21□□□□□ -0.13
IFT88-202ENST00000351808 SLFN11Q7Z7L1 901 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 ZNF554Q86TJ5 538 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 C18orf8Q96DM3 657 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 HES6Q96HZ4 224 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 ROPN1BQ9BZX4 212 aaPredicted RBP14.21□□□□□ -0.13
IFT88-202ENST00000351808 TLE6Q9H808 572 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 ROPN1Q9HAT0 212 aaPredicted RBP14.21□□□□□ -0.13
IFT88-202ENST00000351808 SLCO1B3Q9NPD5 702 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 STK32BQ9NY57 414 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 NAGPAQ9UK23 515 aa14.21□□□□□ -0.13
IFT88-202ENST00000351808 DIP2CQ9Y2E4 1556 aa14.21□□□□□ -0.14
IFT88-202ENST00000351808 GSG1L2A8MUP6 293 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 TRAFD1O14545 582 aaPredicted RBP14.2□□□□□ -0.14
IFT88-202ENST00000351808 FGFR1OPO95684 399 aaKnown RBP14.2□□□□□ -0.14
IFT88-202ENST00000351808 RARGP13631 454 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 PLCG2P16885 1265 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 RCAN1P53805 252 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 KBTBD12Q3ZCT8 623 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 DCAF12L1Q5VU92 463 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 SCUBE1Q8IWY4 988 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 MKL1Q969V6 931 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 OLFM3Q96PB7 478 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 C7orf25Q9BPX7 421 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 NKIRAS1Q9NYS0 192 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 TBK1Q9UHD2 729 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 AMFRQ9UKV5 643 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 DCTN3O75935 186 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 PABPC4LP0CB38 370 aaKnown RBP14.2□□□□□ -0.14
IFT88-202ENST00000351808 DRG2P55039 364 aaKnown RBP14.2□□□□□ -0.14
IFT88-202ENST00000351808 ADARP55265 1226 aaKnown RBP14.2□□□□□ -0.14
IFT88-202ENST00000351808 SEC23AQ15436 765 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 CFAP157Q5JU67 520 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 ARHGEF18Q6ZSZ5 1173 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 RFX8Q6ZV50 586 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 MAP7D3Q8IWC1 876 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 STX18Q9P2W9 335 aaKnown RBP14.2□□□□□ -0.14
IFT88-202ENST00000351808 PHTF1Q9UMS5 762 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 TCRBV5S4A2TA0A5A2 114 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 POTEJP0CG39 1038 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 VARSP26640 1264 aaKnown RBP14.2□□□□□ -0.14
IFT88-202ENST00000351808 ERFP50548 548 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 LRRC41Q15345 812 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 CABP7Q86V35 215 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 PLBD2Q8NHP8 589 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 C17orf50Q8WW18 174 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 STMN2Q93045 179 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 CATSPER2Q96P56 530 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 RANBP17Q9H2T7 1088 aaKnown RBP14.2□□□□□ -0.14
IFT88-202ENST00000351808 METTL14Q9HCE5 456 aaKnown RBP14.2□□□□□ -0.14
IFT88-202ENST00000351808 ARHGEF38Q9NXL2 777 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 DDX43Q9NXZ2 648 aaKnown RBP14.2□□□□□ -0.14
IFT88-202ENST00000351808 RASAL2Q9UJF2 1139 aa14.2□□□□□ -0.14
IFT88-202ENST00000351808 ABCB11O95342 1321 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 NBPF26B4DH59 902 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 SMIM22K7EJ46 135 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 OPHN1O60890 802 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 RNASEH1O60930 286 aaKnown RBP14.19□□□□□ -0.14
IFT88-202ENST00000351808 GALK1P51570 392 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 SH3BGRP55822 239 aaPredicted RBP14.19□□□□□ -0.14
IFT88-202ENST00000351808 SULT2A1Q06520 285 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 PPP2R5CQ13362 524 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 R3HDM1Q15032 1099 aaKnown RBP14.19□□□□□ -0.14
IFT88-202ENST00000351808 IZUMO2Q6UXV1 221 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 ARHGAP27Q6ZUM4 889 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 PTF1AQ7RTS3 328 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 SRRM1Q8IYB3 904 aaKnown RBP14.19□□□□□ -0.14
IFT88-202ENST00000351808 ST13P4Q8IZP2 240 aaPredicted RBP14.19□□□□□ -0.14
IFT88-202ENST00000351808 OXCT2Q9BYC2 517 aaPredicted RBP14.19□□□□□ -0.14
IFT88-202ENST00000351808 ARPP21Q9UBL0 812 aaPredicted RBP14.19□□□□□ -0.14
IFT88-202ENST00000351808 TBC1D30Q9Y2I9 924 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 ZNF711Q9Y462 761 aa14.19□□□□□ -0.14
IFT88-202ENST00000351808 CHD4Q14839 1912 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms