RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 MRPS26Q9BYN8 205 aaKnown RBP12.56□□□□□ -0.4
TRAF3-201ENST00000347662 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.56□□□□□ -0.4
TRAF3-201ENST00000347662 CCDC195A0A1B0GUA6 201 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 DENND3A2RUS2 1198 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 TADA3O75528 432 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 SEC24DO94855 1032 aaPredicted RBP12.56□□□□□ -0.4
TRAF3-201ENST00000347662 CCND2P30279 289 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 SLC44A4Q53GD3 710 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 BTNL9Q6UXG8 535 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 KLHL8Q9P2G9 620 aaPredicted RBP12.56□□□□□ -0.4
TRAF3-201ENST00000347662 CYP2D6P10635 497 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 PCP11498 1178 aaKnown RBP12.56□□□□□ -0.4
TRAF3-201ENST00000347662 MCAMP43121 646 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 NCALDP61601 193 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 MFN1Q8IWA4 741 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 DDIASQ8IXT1 998 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 TBC1D19Q8N5T2 526 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 OR6B3Q8NGW1 331 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 TM6SF1Q9BZW5 370 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 RPF1Q9H9Y2 349 aaKnown RBP12.56□□□□□ -0.4
TRAF3-201ENST00000347662 PARVBQ9HBI1 364 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 MID2Q9UJV3 735 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 COL4A3BPQ9Y5P4 624 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 EXOC1LA0A1B0GW35 172 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 SMAD1Q15797 465 aaKnown RBP12.56□□□□□ -0.4
TRAF3-201ENST00000347662 SPDYAQ5MJ70 313 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 URGCPQ8TCY9 931 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 TBCKQ8TEA7 893 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 FAM161BQ96MY7 647 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 TET3O43151 1660 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 KLHL18O94889 574 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 TTC8Q8TAM2 541 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 MAGEB10Q96LZ2 347 aaPredicted RBP12.56□□□□□ -0.4
TRAF3-201ENST00000347662 PLTPP55058 493 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 HDLBPQ00341 1268 aaKnown RBP12.55□□□□□ -0.4
TRAF3-201ENST00000347662 APOA5Q6Q788 366 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 PYROXD1Q8WU10 500 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 TRIM54Q9BYV2 358 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 CLTCQ00610 1675 aaKnown RBP12.55□□□□□ -0.4
TRAF3-201ENST00000347662 TUBB6Q9BUF5 446 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 DNAJC17Q9NVM6 304 aaKnown RBP12.55□□□□□ -0.4
TRAF3-201ENST00000347662 ZNF711Q9Y462 761 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 CDC25AP30304 524 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 SLC44A5Q8NCS7 719 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 OR8K1Q8NGG5 319 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 RSPH10B2B2RC85 870 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 RSPH10BP0C881 870 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 EPB42P16452 691 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 DDX5P17844 614 aaKnown RBP12.55□□□□□ -0.4
TRAF3-201ENST00000347662 ADRA2BP18089 450 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 MAP4P27816 1152 aaKnown RBP12.55□□□□□ -0.4
TRAF3-201ENST00000347662 NUP62P37198 522 aaPredicted RBP12.55□□□□□ -0.4
TRAF3-201ENST00000347662 FAM83BQ5T0W9 1011 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 CC2D1AQ6P1N0 951 aaPredicted RBP12.55□□□□□ -0.4
TRAF3-201ENST00000347662 TRAF7Q6Q0C0 670 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 ADNPQ9H2P0 1102 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 OVOS2A0A0G2JMS6 1433 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 OVOS2A0A0J9YW53 1432 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 OVOS2Q6IE36 1432 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 GUCA1AP43080 201 aaPredicted RBP12.55□□□□□ -0.4
TRAF3-201ENST00000347662 EPHA10Q5JZY3 1008 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 EXD1Q8NHP7 514 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 TTC17Q96AE7 1141 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 CPVLQ9H3G5 476 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 POLE3Q9NRF9 147 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 UTP6Q9NYH9 597 aaKnown RBP12.55□□□□□ -0.4
TRAF3-201ENST00000347662 PFKFB1P16118 471 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 RALGDSQ12967 914 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 GTF2H3Q13889 308 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 SLC10A5Q5PT55 438 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 PPP1R36Q96LQ0 422 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 AIPL1Q9NZN9 384 aa12.55□□□□□ -0.4
TRAF3-201ENST00000347662 ZSWIM6Q9HCJ5 1215 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 DTNAQ9Y4J8 743 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 CCDC15Q0P6D6 951 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 PWP1Q13610 501 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 PHKG1Q16816 387 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 BBS9Q3SYG4 887 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 FOXP4Q8IVH2 680 aaPredicted RBP12.54□□□□□ -0.4
TRAF3-201ENST00000347662 DCUN1D1Q96GG9 259 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 NDEL1Q9GZM8 345 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 TRPC7Q9HCX4 862 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 H2AFZP0C0S5 128 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 FOSL2P15408 326 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 CDC37Q16543 378 aaPredicted RBP12.54□□□□□ -0.4
TRAF3-201ENST00000347662 H2AFVQ71UI9 128 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 PODNQ7Z5L7 613 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 RAVER2Q9HCJ3 691 aaKnown RBP12.54□□□□□ -0.4
TRAF3-201ENST00000347662 GPR108Q9NPR9 543 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 ARHGAP26Q9UNA1 814 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 GRK2P25098 689 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 CLCN1P35523 988 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 GPSM2P81274 684 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 CEP55Q53EZ4 464 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 FBXW10Q5XX13 1052 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 ARHGAP17Q68EM7 881 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 TRIM11Q96F44 468 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 PLEKHA8Q96JA3 519 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 KIF24Q5T7B8 1368 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 CCDC78A2IDD5 438 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms