RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ZBTB41Q5SVQ8 909 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 KRT39Q6A163 491 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 TRIM65Q6PJ69 517 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 FUKQ8N0W3 1084 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 GIPC2Q8TF65 315 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 EME1Q96AY2 570 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 LY9Q9HBG7 655 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 ARHGAP26Q9UNA1 814 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 ABCA5Q8WWZ7 1642 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 TTC37Q6PGP7 1564 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 REREQ9P2R6 1566 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 PALM3A6NDB9 673 aaPredicted RBP12.87□□□□□ -0.35
COL12A1-202ENST00000345356 H0YCG3 227 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 E2F6O75461 281 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 CPA2P48052 419 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 COASYQ13057 564 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 JAMLQ86YT9 394 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 DDHD1Q8NEL9 900 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 CDC25CP30307 473 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 EZH2Q15910 746 aaKnown RBP12.87□□□□□ -0.35
COL12A1-202ENST00000345356 GUF1Q8N442 669 aaKnown RBP12.87□□□□□ -0.35
COL12A1-202ENST00000345356 CASP10Q92851 521 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 ANKRD27Q96NW4 1050 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 SNX25Q9H3E2 840 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 DCLRE1BQ9H816 532 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 C10orf88Q9H8K7 445 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 PIH1D3Q9NQM4 214 aaKnown RBP12.87□□□□□ -0.35
COL12A1-202ENST00000345356 GIMAP4Q9NUV9 329 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 CYP2D7A0A087X1C5 515 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 PRAMEF22A3QJZ6 481 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 ATP9AO75110 1047 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 POLR2MP0CAP2 368 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 ADSSL1Q8N142 457 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 C9orf72Q96LT7 481 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 RIOK1Q9BRS2 568 aaKnown RBP12.87□□□□□ -0.35
COL12A1-202ENST00000345356 MXD3Q9BW11 206 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 FAM129AQ9BZQ8 928 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 KLC2Q9H0B6 622 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 DMGDHQ9UI17 866 aaKnown RBP12.87□□□□□ -0.35
COL12A1-202ENST00000345356 GINS2Q9Y248 185 aa12.87□□□□□ -0.35
COL12A1-202ENST00000345356 EIF4G3O43432 1585 aaKnown RBP12.86□□□□□ -0.35
COL12A1-202ENST00000345356 PLEKHG1Q9ULL1 1385 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 FOSP01100 380 aaPredicted RBP12.86□□□□□ -0.35
COL12A1-202ENST00000345356 ITKQ08881 620 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 TCP10Q12799 353 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 DNAJC3Q13217 504 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 TXNRD1Q16881 649 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 FAM210AQ96ND0 272 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 EHD4Q9H223 541 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 MTO1Q9Y2Z2 717 aaKnown RBP12.86□□□□□ -0.35
COL12A1-202ENST00000345356 POTEMA6NI47 508 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 RSPH10B2B2RC85 870 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 RSPH10BP0C881 870 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 IFRD2Q12894 506 aaPredicted RBP12.86□□□□□ -0.35
COL12A1-202ENST00000345356 RAD54LQ92698 747 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 MAP2K7O14733 419 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 EXOSC10Q01780 885 aaKnown RBP12.86□□□□□ -0.35
COL12A1-202ENST00000345356 FLOT2Q14254 428 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 TRIM16LQ309B1 348 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 MARCOQ9UEW3 520 aaPredicted RBP12.86□□□□□ -0.35
COL12A1-202ENST00000345356 PPME1Q9Y570 386 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 EFTUD2Q15029 972 aaKnown RBP eCLIP12.86□□□□□ -0.35
COL12A1-202ENST00000345356 PAPD7Q5XG87 772 aaKnown RBP12.86□□□□□ -0.35
COL12A1-202ENST00000345356 COL23A1Q86Y22 540 aaPredicted RBP12.86□□□□□ -0.35
COL12A1-202ENST00000345356 KIAA0825Q8IV33 1275 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 SLC17A8Q8NDX2 589 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 ACAP3Q96P50 834 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 ERP44Q9BS26 406 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 SH3GLB2Q9NR46 395 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 INPP5FQ9Y2H2 1132 aa12.86□□□□□ -0.35
COL12A1-202ENST00000345356 ATP2C1P98194 919 aaPredicted RBP12.85□□□□□ -0.35
COL12A1-202ENST00000345356 LRRC8EQ6NSJ5 796 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 CATSPER3Q86XQ3 398 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 ANKMY2Q8IV38 441 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 BRIP1Q9BX63 1249 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 PKD2L2Q9NZM6 624 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 ADAM22Q9P0K1 906 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 IPO11Q9UI26 975 aaKnown RBP12.85□□□□□ -0.35
COL12A1-202ENST00000345356 SFI1A8K8P3 1242 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 KLK7P49862 253 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 HSPH1Q92598 858 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 STRBPQ96SI9 672 aaKnown RBP12.85□□□□□ -0.35
COL12A1-202ENST00000345356 KCNK16Q96T55 309 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 TESPA1A2RU30 521 aaPredicted RBP12.85□□□□□ -0.35
COL12A1-202ENST00000345356 TTLL1O95922 423 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 BTNL9Q6UXG8 535 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 ADCK1Q86TW2 530 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 GTSE1Q9NYZ3 720 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 MCM8Q9UJA3 840 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 GGA1Q9UJY5 639 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 MED14O60244 1454 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 GOLGA8IPA6NC78 632 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 GOLGA8JA6NMD2 632 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 NAB2Q15742 525 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 UBE2SQ16763 222 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 ASPRV1Q53RT3 343 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 TAF1BQ53T94 588 aaPredicted RBP12.85□□□□□ -0.35
COL12A1-202ENST00000345356 CNBD2Q96M20 576 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 NACC1Q96RE7 527 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 RBM15Q96T37 977 aaKnown RBP eCLIP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms