RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 SH2D3AQ9BRG2 576 aa20.72■□□□□ 0.91
CDHR4-201ENST00000343366 PANK2Q9BZ23 570 aa20.72■□□□□ 0.91
CDHR4-201ENST00000343366 INO80BQ9C086 356 aaPredicted RBP20.72■□□□□ 0.91
CDHR4-201ENST00000343366 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.71■□□□□ 0.91
CDHR4-201ENST00000343366 NDUFA8P51970 172 aa20.71■□□□□ 0.91
CDHR4-201ENST00000343366 MRPS6P82932 125 aaKnown RBP20.71■□□□□ 0.91
CDHR4-201ENST00000343366 FAM160A1Q05DH4 1040 aa20.71■□□□□ 0.91
CDHR4-201ENST00000343366 MCM6Q14566 821 aa20.71■□□□□ 0.91
CDHR4-201ENST00000343366 TRIM71Q2Q1W2 868 aaKnown RBP20.71■□□□□ 0.91
CDHR4-201ENST00000343366 RUFY4Q6ZNE9 571 aa20.71■□□□□ 0.91
CDHR4-201ENST00000343366 GPBP1Q86WP2 473 aa20.71■□□□□ 0.91
CDHR4-201ENST00000343366 IFT74Q96LB3 600 aa20.71■□□□□ 0.91
CDHR4-201ENST00000343366 KBTBD4Q9NVX7 518 aa20.71■□□□□ 0.91
CDHR4-201ENST00000343366 SUCLA2Q9P2R7 463 aaPredicted RBP20.71■□□□□ 0.91
CDHR4-201ENST00000343366 HOOK1Q9UJC3 728 aaKnown RBP20.71■□□□□ 0.91
CDHR4-201ENST00000343366 C5orf42Q9H799 3197 aa20.71■□□□□ 0.91
CDHR4-201ENST00000343366 PHLPP2Q6ZVD8 1323 aa20.71■□□□□ 0.91
CDHR4-201ENST00000343366 A0A087X0B3 334 aa20.7■□□□□ 0.9
CDHR4-201ENST00000343366 RSPH10B2B2RC85 870 aa20.7■□□□□ 0.9
CDHR4-201ENST00000343366 PRPF40AO75400 957 aaKnown RBP20.7■□□□□ 0.9
CDHR4-201ENST00000343366 KRT18P05783 430 aaKnown RBP20.7■□□□□ 0.9
CDHR4-201ENST00000343366 RSPH10BP0C881 870 aa20.7■□□□□ 0.9
CDHR4-201ENST00000343366 PTMSP20962 102 aa20.7■□□□□ 0.9
CDHR4-201ENST00000343366 ABCD1P33897 745 aa20.7■□□□□ 0.9
CDHR4-201ENST00000343366 CLCN3P51790 818 aa20.7■□□□□ 0.9
CDHR4-201ENST00000343366 PCBP1Q15365 356 aaKnown RBP eCLIP20.7■□□□□ 0.9
CDHR4-201ENST00000343366 LRRC8DQ7L1W4 858 aa20.7■□□□□ 0.9
CDHR4-201ENST00000343366 LRRC71Q8N4P6 559 aa20.7■□□□□ 0.9
CDHR4-201ENST00000343366 DHX38Q92620 1227 aaKnown RBP20.7■□□□□ 0.9
CDHR4-201ENST00000343366 TIGD1Q96MW7 591 aa20.7■□□□□ 0.9
CDHR4-201ENST00000343366 FAM49AQ9H0Q0 323 aaPredicted RBP20.7■□□□□ 0.9
CDHR4-201ENST00000343366 XPNPEP1Q9NQW7 623 aa20.7■□□□□ 0.9
CDHR4-201ENST00000343366 LARSQ9P2J5 1176 aaKnown RBP20.7■□□□□ 0.9
CDHR4-201ENST00000343366 COL4A3BPQ9Y5P4 624 aa20.7■□□□□ 0.9
CDHR4-201ENST00000343366 TRPV2Q9Y5S1 764 aa20.7■□□□□ 0.9
CDHR4-201ENST00000343366 ZNF318Q5VUA4 2279 aa20.7■□□□□ 0.9
CDHR4-201ENST00000343366 MYH11P35749 1972 aa20.69■□□□□ 0.9
CDHR4-201ENST00000343366 A0A087WWV3 80 aa20.69■□□□□ 0.9
CDHR4-201ENST00000343366 ZNF202O95125 648 aa20.69■□□□□ 0.9
CDHR4-201ENST00000343366 ARL2P36404 184 aa20.69■□□□□ 0.9
CDHR4-201ENST00000343366 CRYBB1P53674 252 aaPredicted RBP20.69■□□□□ 0.9
CDHR4-201ENST00000343366 FAM102BQ5T8I3 360 aa20.69■□□□□ 0.9
CDHR4-201ENST00000343366 CNNM4Q6P4Q7 775 aa20.69■□□□□ 0.9
CDHR4-201ENST00000343366 ELOA2Q8IYF1 753 aaPredicted RBP20.69■□□□□ 0.9
CDHR4-201ENST00000343366 NFKBIZQ9BYH8 718 aa20.69■□□□□ 0.9
CDHR4-201ENST00000343366 CELF4Q9BZC1 486 aaKnown RBP20.69■□□□□ 0.9
CDHR4-201ENST00000343366 H0YCG3 227 aa20.68■□□□□ 0.9
CDHR4-201ENST00000343366 WDR5P61964 334 aaKnown RBP20.68■□□□□ 0.9
CDHR4-201ENST00000343366 DHX8Q14562 1220 aaKnown RBP20.68■□□□□ 0.9
CDHR4-201ENST00000343366 ZNF618Q5T7W0 954 aa20.68■□□□□ 0.9
CDHR4-201ENST00000343366 RHPN2Q8IUC4 686 aa20.68■□□□□ 0.9
CDHR4-201ENST00000343366 CNNM3Q8NE01 707 aa20.68■□□□□ 0.9
CDHR4-201ENST00000343366 PRPF31Q8WWY3 499 aaKnown RBP20.68■□□□□ 0.9
CDHR4-201ENST00000343366 TMEM143Q96AN5 459 aa20.68■□□□□ 0.9
CDHR4-201ENST00000343366 RUSC1Q9BVN2 902 aa20.68■□□□□ 0.9
CDHR4-201ENST00000343366 GCOM2Q9BZD3 368 aaPredicted RBP20.68■□□□□ 0.9
CDHR4-201ENST00000343366 POLR3FQ9H1D9 316 aaPredicted RBP20.68■□□□□ 0.9
CDHR4-201ENST00000343366 PRR33A8MZF0 331 aa20.67■□□□□ 0.9
CDHR4-201ENST00000343366 ACTN4O43707 911 aaKnown RBP20.67■□□□□ 0.9
CDHR4-201ENST00000343366 TBCAO75347 108 aaKnown RBP20.67■□□□□ 0.9
CDHR4-201ENST00000343366 GPR32O75388 356 aa20.67■□□□□ 0.9
CDHR4-201ENST00000343366 NAMPTP43490 491 aa20.67■□□□□ 0.9
CDHR4-201ENST00000343366 GPC3P51654 580 aa20.67■□□□□ 0.9
CDHR4-201ENST00000343366 SMTNP53814 917 aa20.67■□□□□ 0.9
CDHR4-201ENST00000343366 NLRP11P59045 1033 aaKnown RBP20.67■□□□□ 0.9
CDHR4-201ENST00000343366 MGAT3Q09327 533 aa20.67■□□□□ 0.9
CDHR4-201ENST00000343366 LAMTOR4Q0VGL1 99 aa20.67■□□□□ 0.9
CDHR4-201ENST00000343366 DMP1Q13316 513 aaPredicted RBP20.67■□□□□ 0.9
CDHR4-201ENST00000343366 MKRN4PQ13434 485 aaPredicted RBP20.67■□□□□ 0.9
CDHR4-201ENST00000343366 TCTN1Q2MV58 587 aa20.67■□□□□ 0.9
CDHR4-201ENST00000343366 KRBA2Q6ZNG9 492 aa20.67■□□□□ 0.9
CDHR4-201ENST00000343366 FAM178BQ8IXR5 827 aa20.67■□□□□ 0.9
CDHR4-201ENST00000343366 FMR1NBQ8N0W7 255 aaPredicted RBP20.67■□□□□ 0.9
CDHR4-201ENST00000343366 GDPD5Q8WTR4 605 aa20.67■□□□□ 0.9
CDHR4-201ENST00000343366 DDX12PQ92771 950 aa20.67■□□□□ 0.9
CDHR4-201ENST00000343366 SCLT1Q96NL6 688 aa20.67■□□□□ 0.9
CDHR4-201ENST00000343366 C2orf40Q9H1Z8 148 aa20.67■□□□□ 0.9
CDHR4-201ENST00000343366 GOLPH3LQ9H4A5 285 aa20.67■□□□□ 0.9
CDHR4-201ENST00000343366 SEL1LQ9UBV2 794 aa20.67■□□□□ 0.9
CDHR4-201ENST00000343366 CDY2AQ9Y6F7 541 aa20.67■□□□□ 0.9
CDHR4-201ENST00000343366 KINO60870 393 aaKnown RBP20.66■□□□□ 0.9
CDHR4-201ENST00000343366 HIP1RO75146 1068 aa20.66■□□□□ 0.9
CDHR4-201ENST00000343366 CXCL10P02778 98 aa20.66■□□□□ 0.9
CDHR4-201ENST00000343366 VTNP04004 478 aa20.66■□□□□ 0.9
CDHR4-201ENST00000343366 GAP43P17677 238 aa20.66■□□□□ 0.9
CDHR4-201ENST00000343366 PHKA2P46019 1235 aa20.66■□□□□ 0.9
CDHR4-201ENST00000343366 ERVK-21P61565 698 aa20.66■□□□□ 0.9
CDHR4-201ENST00000343366 GIT2Q14161 759 aa20.66■□□□□ 0.9
CDHR4-201ENST00000343366 LEXMQ3ZCV2 418 aa20.66■□□□□ 0.9
CDHR4-201ENST00000343366 LONRF3Q496Y0 759 aa20.66■□□□□ 0.9
CDHR4-201ENST00000343366 ARSHQ5FYA8 562 aa20.66■□□□□ 0.9
CDHR4-201ENST00000343366 SRGAP1Q7Z6B7 1085 aa20.66■□□□□ 0.9
CDHR4-201ENST00000343366 TMCO2Q7Z6W1 182 aaPredicted RBP20.66■□□□□ 0.9
CDHR4-201ENST00000343366 ENGASEQ8NFI3 743 aa20.66■□□□□ 0.9
CDHR4-201ENST00000343366 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.66■□□□□ 0.9
CDHR4-201ENST00000343366 LRRC15Q8TF66 581 aa20.66■□□□□ 0.9
CDHR4-201ENST00000343366 NLRP7Q8WX94 980 aa20.66■□□□□ 0.9
CDHR4-201ENST00000343366 WNT8BQ93098 351 aa20.66■□□□□ 0.9
CDHR4-201ENST00000343366 C7orf25Q9BPX7 421 aa20.66■□□□□ 0.9
CDHR4-201ENST00000343366 UBE2ZQ9H832 354 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms