RNA–Protein interactions for RNA: ENST00000343137.8

PRDM2-203, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-203ENST00000343137 USP17L13C9JLJ4 530 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 USP17L11C9JVI0 530 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 USP17L18D6R9N7 530 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 USP17L22D6RA61 530 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 USP17L17D6RBQ6 530 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 USP17L19D6RCP7 530 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 USP17L20D6RJB6 530 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 PHF2O75151 1096 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 GH2P01242 217 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 KRT7P08729 469 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 H2AFXP16104 143 aaPredicted RBP9□□□□□ -0.97
PRDM2-203ENST00000343137 DYNLT1P63172 113 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 USP17L24Q0WX57 530 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 NAB2Q15742 525 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 USP17L6PQ6QN14 398 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 WDR75Q8IWA0 830 aaKnown RBP9□□□□□ -0.97
PRDM2-203ENST00000343137 GSDMBQ8TAX9 411 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 STXBP3O00186 592 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 PRLRP16471 622 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 GCLMP48507 274 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 WDR93Q6P2C0 686 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 TAB3Q8N5C8 712 aaPredicted RBP9□□□□□ -0.97
PRDM2-203ENST00000343137 RNPC3Q96LT9 517 aaKnown RBP9□□□□□ -0.97
PRDM2-203ENST00000343137 CENPKQ9BS16 269 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 AGXT2Q9BYV1 514 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 GINM1Q9NU53 330 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 ZFP69BQ9UJL9 534 aa9□□□□□ -0.97
PRDM2-203ENST00000343137 SFI1A8K8P3 1242 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 FSCBQ5H9T9 825 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 ZNF667Q5HYK9 610 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 FAF2Q96CS3 445 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 CFAP36Q96G28 342 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 EIF3DO15371 548 aaKnown RBP eCLIP8.99□□□□□ -0.97
PRDM2-203ENST00000343137 TOM1L1O75674 476 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 BAG6P46379 1132 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 PSMC5P62195 406 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 COG7P83436 770 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 FIGNQ5HY92 759 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 ST13P4Q8IZP2 240 aaPredicted RBP8.99□□□□□ -0.97
PRDM2-203ENST00000343137 SLC44A5Q8NCS7 719 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 BANK1Q8NDB2 785 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 DNAJC7Q99615 494 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 MKNK1Q9BUB5 465 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 MRPL40Q9NQ50 206 aaKnown RBP8.99□□□□□ -0.97
PRDM2-203ENST00000343137 AKT3Q9Y243 479 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 CEP170BQ9Y4F5 1589 aaPredicted RBP8.99□□□□□ -0.97
PRDM2-203ENST00000343137 BRAFP15056 766 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 ARMCX2Q7L311 632 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.99□□□□□ -0.97
PRDM2-203ENST00000343137 FBXO40Q9UH90 709 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.99□□□□□ -0.97
PRDM2-203ENST00000343137 SPATA31D1Q6ZQQ2 1576 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 MRPS25P82663 173 aaKnown RBP8.99□□□□□ -0.97
PRDM2-203ENST00000343137 MDM2Q00987 491 aaPredicted RBP8.99□□□□□ -0.97
PRDM2-203ENST00000343137 ADCY1Q08828 1119 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 KIAA1755Q5JYT7 1200 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 ATP11CQ8NB49 1132 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 LRRC37BQ96QE4 947 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 TGS1Q96RS0 853 aaKnown RBP8.99□□□□□ -0.97
PRDM2-203ENST00000343137 C2orf40Q9H1Z8 148 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 ESYT3A0FGR9 886 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 P4HA2O15460 535 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 SPAG7O75391 227 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 OATP04181 439 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 S100BP04271 92 aaPredicted RBP8.99□□□□□ -0.97
PRDM2-203ENST00000343137 EIF2AK2P19525 551 aaKnown RBP8.99□□□□□ -0.97
PRDM2-203ENST00000343137 ESRRGP62508 458 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 ZNF543Q08ER8 600 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 ZNF473Q8WTR7 871 aaKnown RBP8.99□□□□□ -0.97
PRDM2-203ENST00000343137 DCPSQ96C86 337 aaKnown RBP8.99□□□□□ -0.97
PRDM2-203ENST00000343137 ROPN1BQ9BZX4 212 aaPredicted RBP8.99□□□□□ -0.97
PRDM2-203ENST00000343137 ROPN1Q9HAT0 212 aaPredicted RBP8.99□□□□□ -0.97
PRDM2-203ENST00000343137 NXF1Q9UBU9 619 aaKnown RBP8.99□□□□□ -0.97
PRDM2-203ENST00000343137 APEX2Q9UBZ4 518 aa8.99□□□□□ -0.97
PRDM2-203ENST00000343137 HERC5Q9UII4 1024 aaKnown RBP8.99□□□□□ -0.97
PRDM2-203ENST00000343137 GYG2O15488 501 aa8.98□□□□□ -0.97
PRDM2-203ENST00000343137 SORBS3O60504 671 aa8.98□□□□□ -0.97
PRDM2-203ENST00000343137 HAUS5O94927 633 aa8.98□□□□□ -0.97
PRDM2-203ENST00000343137 PRKG1Q13976 671 aa8.98□□□□□ -0.97
PRDM2-203ENST00000343137 RC3H1Q5TC82 1133 aaKnown RBP8.98□□□□□ -0.97
PRDM2-203ENST00000343137 ZNF449Q6P9G9 518 aa8.98□□□□□ -0.97
PRDM2-203ENST00000343137 C16orf86Q6ZW13 317 aa8.98□□□□□ -0.97
PRDM2-203ENST00000343137 METTL23Q86XA0 190 aa8.98□□□□□ -0.97
PRDM2-203ENST00000343137 TRIM59Q8IWR1 403 aa8.98□□□□□ -0.97
PRDM2-203ENST00000343137 SP8Q8IXZ3 490 aa8.98□□□□□ -0.97
PRDM2-203ENST00000343137 RNF168Q8IYW5 571 aaPredicted RBP8.98□□□□□ -0.97
PRDM2-203ENST00000343137 GPD1LQ8N335 351 aa8.98□□□□□ -0.97
PRDM2-203ENST00000343137 DHX38Q92620 1227 aaKnown RBP8.98□□□□□ -0.97
PRDM2-203ENST00000343137 HEXIM2Q96MH2 286 aaKnown RBP8.98□□□□□ -0.97
PRDM2-203ENST00000343137 RPS6KC1Q96S38 1066 aa8.98□□□□□ -0.97
PRDM2-203ENST00000343137 IRX2Q9BZI1 471 aaPredicted RBP8.98□□□□□ -0.97
PRDM2-203ENST00000343137 TRIM15Q9C019 465 aa8.98□□□□□ -0.97
PRDM2-203ENST00000343137 ISCUQ9H1K1 167 aa8.98□□□□□ -0.97
PRDM2-203ENST00000343137 KCND1Q9NSA2 647 aa8.98□□□□□ -0.97
PRDM2-203ENST00000343137 KLC4Q9NSK0 619 aa8.98□□□□□ -0.97
PRDM2-203ENST00000343137 KRT14P02533 472 aa8.98□□□□□ -0.97
PRDM2-203ENST00000343137 CD58P19256 250 aa8.98□□□□□ -0.97
PRDM2-203ENST00000343137 ITIH2P19823 946 aa8.98□□□□□ -0.97
PRDM2-203ENST00000343137 PPP2R5CQ13362 524 aa8.98□□□□□ -0.97
PRDM2-203ENST00000343137 THOC5Q13769 683 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms