RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 CUTAO60888 179 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 HIP1RO75146 1068 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 NAMPTP43490 491 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 ME1P48163 572 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 FAM189BP81408 668 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 TAP1Q03518 808 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 MAPK7Q13164 816 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 MCM6Q14566 821 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 DAW1Q8N136 415 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 LARP4BQ92615 738 aaKnown RBP16.87■□□□□ 0.29
UBE3B-201ENST00000340074 IFT74Q96LB3 600 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 CHST12Q9NRB3 414 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 DACT1Q9NYF0 836 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 RCOR1Q9UKL0 485 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 LRFN2Q9ULH4 789 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 PCDHB7Q9Y5E2 793 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 ATP6V1DQ9Y5K8 247 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 COL4A4P53420 1690 aaPredicted RBP16.87■□□□□ 0.29
UBE3B-201ENST00000340074 A0A087X0B3 334 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 NPHP3-ACAD11A0A0J9YXS1 232 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 SFI1A8K8P3 1242 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 DGKIO75912 1065 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 ERLIN2O94905 339 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 STAG3L1P0CL83 205 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 NCLP19338 710 aaKnown RBP16.87■□□□□ 0.29
UBE3B-201ENST00000340074 GUCY2CP25092 1073 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 KRT85P78386 507 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 NUCB2P80303 420 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 PPP2R5AQ15172 486 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 ARSHQ5FYA8 562 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 AXDND1Q5T1B0 1012 aaPredicted RBP16.87■□□□□ 0.29
UBE3B-201ENST00000340074 RRAGBQ5VZM2 374 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 CDCA2Q69YH5 1023 aaPredicted RBP16.87■□□□□ 0.29
UBE3B-201ENST00000340074 TWF2Q6IBS0 349 aaKnown RBP16.87■□□□□ 0.29
UBE3B-201ENST00000340074 GPBP1Q86WP2 473 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 DRC1Q96MC2 740 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 KIFC3Q9BVG8 833 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 TIPINQ9BVW5 301 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 PANK2Q9BZ23 570 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 MTMR10Q9NXD2 777 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 KCND2Q9NZV8 630 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 PCDHA7Q9UN72 937 aa16.87■□□□□ 0.29
UBE3B-201ENST00000340074 REV3LO60673 3130 aa16.86■□□□□ 0.29
UBE3B-201ENST00000340074 TSPAN1O60635 241 aa16.86■□□□□ 0.29
UBE3B-201ENST00000340074 HOXA11P31270 313 aaPredicted RBP16.86■□□□□ 0.29
UBE3B-201ENST00000340074 ANP32AP39687 249 aaKnown RBP16.86■□□□□ 0.29
UBE3B-201ENST00000340074 PEX3P56589 373 aa16.86■□□□□ 0.29
UBE3B-201ENST00000340074 GRIN2CQ14957 1233 aa16.86■□□□□ 0.29
UBE3B-201ENST00000340074 PCBP1Q15365 356 aaKnown RBP eCLIP16.86■□□□□ 0.29
UBE3B-201ENST00000340074 NAALADL2Q58DX5 795 aa16.86■□□□□ 0.29
UBE3B-201ENST00000340074 SHC4Q6S5L8 630 aa16.86■□□□□ 0.29
UBE3B-201ENST00000340074 SPRED2Q7Z698 418 aa16.86■□□□□ 0.29
UBE3B-201ENST00000340074 ECHDC2Q86YB7 292 aa16.86■□□□□ 0.29
UBE3B-201ENST00000340074 ZBTB8OSQ8IWT0 167 aa16.86■□□□□ 0.29
UBE3B-201ENST00000340074 DEPTORQ8TB45 409 aa16.86■□□□□ 0.29
UBE3B-201ENST00000340074 SP7Q8TDD2 431 aaPredicted RBP16.86■□□□□ 0.29
UBE3B-201ENST00000340074 ZNF689Q96CS4 500 aaPredicted RBP16.86■□□□□ 0.29
UBE3B-201ENST00000340074 C2orf40Q9H1Z8 148 aa16.86■□□□□ 0.29
UBE3B-201ENST00000340074 CERS4Q9HA82 394 aa16.86■□□□□ 0.29
UBE3B-201ENST00000340074 RC3H2Q9HBD1 1191 aaKnown RBP16.86■□□□□ 0.29
UBE3B-201ENST00000340074 RNF216Q9NWF9 866 aaPredicted RBP16.86■□□□□ 0.29
UBE3B-201ENST00000340074 TMEM161AQ9NX61 479 aa16.86■□□□□ 0.29
UBE3B-201ENST00000340074 STK17AQ9UEE5 414 aa16.86■□□□□ 0.29
UBE3B-201ENST00000340074 ADGRA3Q8IWK6 1321 aa16.85■□□□□ 0.29
UBE3B-201ENST00000340074 A0A0U1RQF3 1178 aa16.85■□□□□ 0.29
UBE3B-201ENST00000340074 LINC01553A4QN01 128 aa16.85■□□□□ 0.29
UBE3B-201ENST00000340074 GATMP50440 423 aa16.85■□□□□ 0.29
UBE3B-201ENST00000340074 CACNB1Q02641 598 aaPredicted RBP16.85■□□□□ 0.29
UBE3B-201ENST00000340074 AMHR2Q16671 573 aa16.85■□□□□ 0.29
UBE3B-201ENST00000340074 CCDC73Q6ZRK6 1079 aa16.85■□□□□ 0.29
UBE3B-201ENST00000340074 PDILTQ8N807 584 aa16.85■□□□□ 0.29
UBE3B-201ENST00000340074 LEO1Q8WVC0 666 aaPredicted RBP16.85■□□□□ 0.29
UBE3B-201ENST00000340074 CPB2Q96IY4 423 aa16.85■□□□□ 0.29
UBE3B-201ENST00000340074 SPATA32Q96LK8 384 aa16.85■□□□□ 0.29
UBE3B-201ENST00000340074 REEP2Q9BRK0 252 aa16.85■□□□□ 0.29
UBE3B-201ENST00000340074 TRAIPQ9BWF2 469 aa16.85■□□□□ 0.29
UBE3B-201ENST00000340074 ELAC1Q9H777 363 aaKnown RBP16.85■□□□□ 0.29
UBE3B-201ENST00000340074 TDRD15B5MCY1 1934 aaKnown RBP16.84■□□□□ 0.29
UBE3B-201ENST00000340074 CCDC169A6NNP5 214 aa16.84■□□□□ 0.29
UBE3B-201ENST00000340074 B4GALT5O43286 388 aa16.84■□□□□ 0.29
UBE3B-201ENST00000340074 ARF4P18085 180 aaPredicted RBP16.84■□□□□ 0.29
UBE3B-201ENST00000340074 STAT6P42226 847 aa16.84■□□□□ 0.29
UBE3B-201ENST00000340074 NPTX2P47972 431 aa16.84■□□□□ 0.29
UBE3B-201ENST00000340074 NCBP1Q09161 790 aaKnown RBP16.84■□□□□ 0.29
UBE3B-201ENST00000340074 DMP1Q13316 513 aaPredicted RBP16.84■□□□□ 0.29
UBE3B-201ENST00000340074 RNF169Q8NCN4 708 aa16.84■□□□□ 0.29
UBE3B-201ENST00000340074 GUCD1Q96NT3 240 aa16.84■□□□□ 0.29
UBE3B-201ENST00000340074 CCDC113Q9H0I3 377 aa16.84■□□□□ 0.29
UBE3B-201ENST00000340074 FZD8Q9H461 694 aa16.84■□□□□ 0.29
UBE3B-201ENST00000340074 C17orf75Q9HAS0 396 aa16.84■□□□□ 0.29
UBE3B-201ENST00000340074 FAM105AQ9NUU6 356 aa16.84■□□□□ 0.29
UBE3B-201ENST00000340074 TRIP11Q15643 1979 aa16.83■□□□□ 0.29
UBE3B-201ENST00000340074 EOMESO95936 686 aa16.83■□□□□ 0.28
UBE3B-201ENST00000340074 KRT18P05783 430 aaKnown RBP16.83■□□□□ 0.28
UBE3B-201ENST00000340074 FGFR1P11362 822 aa16.83■□□□□ 0.28
UBE3B-201ENST00000340074 ATF7P17544 494 aaPredicted RBP16.83■□□□□ 0.28
UBE3B-201ENST00000340074 LIG1P18858 919 aa16.83■□□□□ 0.28
UBE3B-201ENST00000340074 AXLP30530 894 aa16.83■□□□□ 0.28
UBE3B-201ENST00000340074 BTG3Q14201 252 aaPredicted RBP16.83■□□□□ 0.28
UBE3B-201ENST00000340074 MAPK6Q16659 721 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms