RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 H0YCG3 227 aa11.64□□□□□ -0.55
TRAF3IP2-201ENST00000340026 NAP1L1P55209 391 aaKnown RBP11.64□□□□□ -0.55
TRAF3IP2-201ENST00000340026 SLC30A10Q6XR72 485 aa11.64□□□□□ -0.55
TRAF3IP2-201ENST00000340026 NT5DC3Q86UY8 548 aa11.64□□□□□ -0.55
TRAF3IP2-201ENST00000340026 CD302Q8IX05 232 aa11.64□□□□□ -0.55
TRAF3IP2-201ENST00000340026 RHOT2Q8IXI1 618 aa11.64□□□□□ -0.55
TRAF3IP2-201ENST00000340026 SYCP3Q8IZU3 236 aa11.64□□□□□ -0.55
TRAF3IP2-201ENST00000340026 MORC4Q8TE76 937 aa11.64□□□□□ -0.55
TRAF3IP2-201ENST00000340026 WHAMMQ8TF30 809 aa11.64□□□□□ -0.55
TRAF3IP2-201ENST00000340026 ISCUQ9H1K1 167 aa11.64□□□□□ -0.55
TRAF3IP2-201ENST00000340026 TCEAL9Q9UHQ7 104 aa11.64□□□□□ -0.55
TRAF3IP2-201ENST00000340026 LCTP09848 1927 aa11.64□□□□□ -0.55
TRAF3IP2-201ENST00000340026 A6NNZ2 444 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 AGPSO00116 658 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 STBD1O95210 358 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 GZMAP12544 262 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 ARID5AQ03989 594 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 PAK2Q13177 524 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 TUBB8Q3ZCM7 444 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 SH3D19Q5HYK7 790 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 EMC10Q5UCC4 262 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 PHLDB3Q6NSJ2 640 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 OTUD6AQ7L8S5 288 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 SLITRK6Q9H5Y7 841 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 HSPBP1Q9NZL4 362 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 ZNF214Q9UL59 606 aaPredicted RBP11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 PCDHA10Q9Y5I2 948 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 CD2APQ9Y5K6 639 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 KIAA1217Q5T5P2 1943 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 KIAA0391O15091 583 aaKnown RBP11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 POLR3GO15318 223 aaPredicted RBP11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 CCNE2O96020 404 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 ICAM3P32942 547 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 CYP2J2P51589 502 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 SMTNP53814 917 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 GALCP54803 685 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 MTMR2Q13614 643 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 CUL1Q13616 776 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 C11orf63Q6NUN7 778 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 TMEM161BQ8NDZ6 487 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 ATP6V0A1Q93050 837 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 CARD9Q9H257 536 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 ZCCHC17Q9NP64 241 aaKnown RBP11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 HACL1Q9UJ83 578 aa11.63□□□□□ -0.55
TRAF3IP2-201ENST00000340026 PGRMC1O00264 195 aaKnown RBP11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 ZC3H11AO75152 810 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 FTCDO95954 541 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 KCNA2P16389 499 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 PTPRAP18433 802 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 CXCR5P32302 372 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 GPC3P51654 580 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 ARHGEF16Q5VV41 709 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 USP37Q86T82 979 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 CCDC125Q86Z20 511 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 MCPH1Q8NEM0 835 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 NSUN6Q8TEA1 469 aaKnown RBP11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 HDAC7Q8WUI4 952 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 MFSD14AQ96MC6 490 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 MTFR1LQ9H019 292 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 RNF146Q9NTX7 359 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 SSC5DA1L4H1 1573 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 GOLGA8KD6RF30 607 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 BACH1O14867 736 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 GARTP22102 1010 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 CLDN10P78369 228 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 SPDYCQ5MJ68 293 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 MICALL2Q8IY33 904 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 FAM71AQ8IYT1 594 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 GOLGA6L1Q8N7Z2 621 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 CALCOCO1Q9P1Z2 691 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 TBX20Q9UMR3 447 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 FAN1Q9Y2M0 1017 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 GOLGA6BA6NDN3 693 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 OPA1O60313 960 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 SHOX2O60902 331 aaPredicted RBP11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 ATP9AO75110 1047 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 RNF40O75150 1001 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 DGAT1O75907 488 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 NR3C2P08235 984 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 EIF2AK2P19525 551 aaKnown RBP11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 GMPSP49915 693 aaPredicted RBP11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 PPP3CAQ08209 521 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 UGCGQ16739 394 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 GJB7Q6PEY0 223 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 CTNNBL1Q8WYA6 563 aaPredicted RBP11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 AGPAT1Q99943 283 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 VPS18Q9P253 973 aa11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 CTDP1Q9Y5B0 961 aaPredicted RBP11.62□□□□□ -0.55
TRAF3IP2-201ENST00000340026 EMSYQ7Z589 1322 aa11.61□□□□□ -0.55
TRAF3IP2-201ENST00000340026 IGSF9BQ9UPX0 1349 aa11.61□□□□□ -0.55
TRAF3IP2-201ENST00000340026 MIF4GDA9UHW6 222 aaKnown RBP11.61□□□□□ -0.55
TRAF3IP2-201ENST00000340026 ATG7O95352 703 aa11.61□□□□□ -0.55
TRAF3IP2-201ENST00000340026 EGFRP00533 1210 aa11.61□□□□□ -0.55
TRAF3IP2-201ENST00000340026 TRIM49P0CI25 452 aa11.61□□□□□ -0.55
TRAF3IP2-201ENST00000340026 TRIM49CP0CI26 452 aa11.61□□□□□ -0.55
TRAF3IP2-201ENST00000340026 BRDTQ58F21 947 aaPredicted RBP11.61□□□□□ -0.55
TRAF3IP2-201ENST00000340026 CATSPERGQ6ZRH7 1159 aa11.61□□□□□ -0.55
TRAF3IP2-201ENST00000340026 ANO5Q75V66 913 aa11.61□□□□□ -0.55
TRAF3IP2-201ENST00000340026 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms